EnhancerDB
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  3. vista23962[chr17:9720284-9720569]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23962[chr17:9720284-9720569]
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Tissue distribution of vista23962
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Transcription factor that possibly regulate vista23962[chr17:9720284-9720569]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 9720431 9720793 RFX5 UCSC Txn Factor no Conserved 108238789
chr17 9720283 9720292 NFIX JASPAR yes 21197677
chr17 9720283 9720292 NFIX JASPAR yes 53067342
chr17 9720283 9720293 NFIA JASPAR yes 21197678
chr17 9720283 9720293 NFIA JASPAR yes 53067343
chr17 9720285 9720291 NFIC JASPAR yes 21197679
chr17 9720285 9720291 NFIC JASPAR yes 53067344
chr17 9720291 9720301 NFKB1 JASPAR yes 21197680
chr17 9720291 9720301 REL JASPAR yes 21197681
chr17 9720291 9720301 NFKB1 JASPAR yes 53067345
chr17 9720291 9720301 REL JASPAR yes 53067346
chr17 9720292 9720302 NFKB1 JASPAR yes 21197682
chr17 9720292 9720302 NFKB1 JASPAR yes 53067347
chr17 9720295 9720302 SPI1 JASPAR yes 21197683
chr17 9720295 9720302 SPI1 JASPAR yes 53067348
chr17 9720295 9720303 EHF JASPAR yes 21197684
chr17 9720295 9720303 EHF JASPAR yes 53067349
chr17 9720296 9720315 CTCF JASPAR yes 21197685
chr17 9720296 9720315 CTCF JASPAR yes 53067350
chr17 9720297 9720304 SPIB JASPAR yes 21197686
chr17 9720297 9720304 SPIB JASPAR yes 53067351
chr17 9720304 9720311 SPIB JASPAR yes 21197687
chr17 9720304 9720311 SPIB JASPAR yes 53067352
chr17 9720305 9720313 EHF JASPAR yes 21197688
chr17 9720305 9720313 EHF JASPAR yes 53067353
chr17 9720309 9720314 ETS2 TRANSFAC yes 21197689
chr17 9720309 9720314 ETS2 TRANSFAC yes 53067354
chr17 9720309 9720324 IRF9 JASPAR yes 21197690
chr17 9720309 9720324 IRF9 JASPAR yes 53067355
chr17 9720311 9720325 STAT1 JASPAR yes 21197691
chr17 9720311 9720325 STAT1 JASPAR yes 53067356
chr17 9720336 9720357 IRF1 JASPAR yes 21197692
chr17 9720336 9720357 IRF1 JASPAR yes 53067357
chr17 9720340 9720354 IRF8 JASPAR yes 21197693
chr17 9720340 9720354 IRF8 JASPAR yes 53067358
chr17 9720375 9720387 ZBTB7C JASPAR yes 21197694
chr17 9720375 9720387 ZBTB7C JASPAR yes 53067359
chr17 9720375 9720395 RREB1 JASPAR yes 21197695
chr17 9720375 9720395 RREB1 JASPAR yes 53067360
chr17 9720377 9720397 RREB1 JASPAR yes 21197696
chr17 9720377 9720397 RREB1 JASPAR yes 53067361
chr17 9720378 9720390 ZBTB7C JASPAR yes 21197697
chr17 9720378 9720390 ZBTB7C JASPAR yes 53067362
chr17 9720378 9720398 RREB1 JASPAR yes 21197698
chr17 9720378 9720398 RREB1 JASPAR yes 53067363
chr17 9720380 9720400 RREB1 JASPAR yes 21197699
chr17 9720380 9720400 RREB1 JASPAR yes 53067364
chr17 9720381 9720393 ZBTB7C JASPAR yes 21197700
chr17 9720381 9720393 ZBTB7C JASPAR yes 53067365
chr17 9720383 9720403 RREB1 JASPAR yes 21197701
chr17 9720383 9720403 RREB1 JASPAR yes 53067366
chr17 9720384 9720399 RUNX2 JASPAR yes 21197702
chr17 9720384 9720399 RUNX2 JASPAR yes 53067367
chr17 9720385 9720405 RREB1 JASPAR yes 21197703
chr17 9720385 9720405 RREB1 JASPAR yes 53067368
chr17 9720426 9720437 BATF JASPAR yes 21197704
chr17 9720426 9720437 BATF JASPAR yes 53067369
chr17 9720438 9720452 GATA2 JASPAR yes 21197705
chr17 9720438 9720452 GATA2 JASPAR yes 53067370
chr17 9720457 9720462 TFAP2A TRANSFAC yes 21197706
chr17 9720457 9720462 TFAP2A TRANSFAC yes 53067371
chr17 9720457 9720463 MZF1 JASPAR yes 21197707
chr17 9720457 9720463 MZF1 JASPAR yes 53067372
chr17 9720463 9720467 YY1 TRANSFAC yes 21197708
chr17 9720463 9720467 YY1 TRANSFAC yes 53067373
chr17 9720484 9720496 FOXI1 JASPAR yes 21197709
chr17 9720484 9720496 FOXI1 JASPAR yes 53067374
chr17 9720509 9720519 BHLHE22 JASPAR yes 21197710
chr17 9720509 9720519 NEUROD2 JASPAR yes 21197711
chr17 9720509 9720519 BHLHE22 JASPAR yes 53067375
chr17 9720509 9720519 NEUROD2 JASPAR yes 53067376
chr17 9720513 9720524 GCM1 JASPAR yes 21197712
chr17 9720513 9720524 GCM1 JASPAR yes 53067377
chr17 9720529 9720541 NHLH1 JASPAR yes 21197713
chr17 9720529 9720541 NHLH1 JASPAR yes 53067378
chr17 9720530 9720540 NHLH1 JASPAR yes 21197714
chr17 9720530 9720540 NHLH1 JASPAR yes 53067379
chr17 9720552 9720562 RELA JASPAR yes 21197715
chr17 9720552 9720562 REL JASPAR yes 21197716
chr17 9720552 9720562 RELA JASPAR yes 53067380
chr17 9720552 9720562 REL JASPAR yes 53067381
chr17 9720556 9720561 GATA2 JASPAR yes 21197717
chr17 9720556 9720561 GATA2 JASPAR yes 53067382
SNP sites on vista23962[chr17:9720284-9720569]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 9720357 rs66593032 C T
IRF1
4745369
chr17 9720406 rs60991634 T TAC,TACAC,TACACAC no 4745370
chr17 9720406 rs71363792 T TACAC,TACACAC no 4745371
chr17 9720546 rs4791875 C T
RFX5
4745372
Genes possibly regulated by vista23962[chr17:9720284-9720569]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 9674751 9694614 - DHRS7C ENSG00000184544.7 9694614 1.0 0.0 15433 74330
chr17 9694544 9725388 - RP11-477N12.3 ENSG00000214978.6 9725388 0.0 0.91 15434 95181
chr17 9725523 9795419 + GLP2R ENSG00000065325.8 9725523 0.94 0.98 15435 95046
chr17 9799637 9808938 - RCVRN ENSG00000109047.7 9808938 0.83 1.0 15436 11631
Expression level of Genes
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miRNAs possibly regulated by vista23962[chr17:9720284-9720569]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results