EnhancerDB
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  3. vista23963[chr17:9731829-9732213]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23963[chr17:9731829-9732213]
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Tissue distribution of vista23963
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Transcription factor that possibly regulate vista23963[chr17:9731829-9732213]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 9731820 9731832 POU3F1 JASPAR yes 21197718
chr17 9731820 9731832 POU3F2 JASPAR yes 21197719
chr17 9731820 9731832 POU3F1 JASPAR yes 53068117
chr17 9731820 9731832 POU3F2 JASPAR yes 53068118
chr17 9731820 9731833 POU3F3 JASPAR yes 21197720
chr17 9731820 9731833 POU3F3 JASPAR yes 53068119
chr17 9731823 9731834 CDX2 JASPAR yes 21197721
chr17 9731823 9731834 CDX2 JASPAR yes 53068120
chr17 9731824 9731835 HOXA10 JASPAR yes 21197722
chr17 9731824 9731835 HOXC11 JASPAR yes 21197723
chr17 9731824 9731835 HOXC12 JASPAR yes 21197724
chr17 9731824 9731835 HOXC13 JASPAR yes 21197725
chr17 9731824 9731835 HOXA10 JASPAR yes 53068121
chr17 9731824 9731835 HOXC11 JASPAR yes 53068122
chr17 9731824 9731835 HOXC12 JASPAR yes 53068123
chr17 9731824 9731835 HOXC13 JASPAR yes 53068124
chr17 9731825 9731834 CDX1 JASPAR yes 21197726
chr17 9731825 9731834 CDX1 JASPAR yes 53068125
chr17 9731825 9731835 HOXC10 JASPAR yes 21197727
chr17 9731825 9731835 HOXD11 JASPAR yes 21197728
chr17 9731825 9731835 HOXC10 JASPAR yes 53068126
chr17 9731825 9731835 HOXD11 JASPAR yes 53068127
chr17 9731853 9731860 NKX3-1 JASPAR yes 21197729
chr17 9731853 9731860 NKX3-1 JASPAR yes 53068128
chr17 9731856 9731865 PITX3 JASPAR yes 21197730
chr17 9731856 9731865 PITX3 JASPAR yes 53068129
chr17 9731856 9731866 GSC2 JASPAR yes 21197731
chr17 9731856 9731866 GSC JASPAR yes 21197732
chr17 9731856 9731866 GSC2 JASPAR yes 53068130
chr17 9731856 9731866 GSC JASPAR yes 53068131
chr17 9731857 9731865 OTX1 JASPAR yes 21197733
chr17 9731857 9731865 OTX2 JASPAR yes 21197734
chr17 9731857 9731865 OTX1 JASPAR yes 53068132
chr17 9731857 9731865 OTX2 JASPAR yes 53068133
chr17 9731914 9731918 LFA1 TRANSFAC yes 21197735
chr17 9731914 9731918 LFA1 TRANSFAC yes 53068134
chr17 9731916 9731926 NOTO JASPAR yes 21197736
chr17 9731916 9731926 NOTO JASPAR yes 53068135
chr17 9731932 9731947 MYBL2 JASPAR yes 21197737
chr17 9731932 9731947 MYBL2 JASPAR yes 53068136
chr17 9731936 9731946 BARHL2 JASPAR yes 21197738
chr17 9731936 9731946 BARHL2 JASPAR yes 53068137
chr17 9731969 9731985 SOX4 JASPAR yes 21197739
chr17 9731969 9731985 SOX4 JASPAR yes 53068138
chr17 9732009 9732024 FOXP1 JASPAR yes 21197740
chr17 9732009 9732024 FOXP1 JASPAR yes 53068139
chr17 9732020 9732026 ETS1 JASPAR yes 21197741
chr17 9732020 9732026 SPI1 JASPAR yes 21197742
chr17 9732020 9732026 ETS1 JASPAR yes 53068140
chr17 9732020 9732026 SPI1 JASPAR yes 53068141
chr17 9732020 9732030 ELK1 JASPAR yes 21197743
chr17 9732020 9732030 ELK1 JASPAR yes 53068142
chr17 9732020 9732035 HSF1 JASPAR yes 21197744
chr17 9732020 9732035 HSF1 JASPAR yes 53068143
chr17 9732049 9732062 POU2F2 JASPAR yes 21197745
chr17 9732049 9732062 POU2F2 JASPAR yes 53068144
chr17 9732053 9732065 FOXI1 JASPAR yes 21197746
chr17 9732053 9732065 FOXI1 JASPAR yes 53068145
chr17 9732054 9732066 FOXC2 JASPAR yes 21197747
chr17 9732054 9732066 FOXC2 JASPAR yes 53068146
chr17 9732054 9732068 FOXF2 JASPAR yes 21197748
chr17 9732054 9732068 FOXF2 JASPAR yes 53068147
chr17 9732055 9732066 FOXC1 JASPAR yes 21197749
chr17 9732055 9732066 FOXC1 JASPAR yes 53068148
chr17 9732056 9732060 YY1 TRANSFAC yes 21197750
chr17 9732056 9732060 YY1 TRANSFAC yes 53068149
chr17 9732082 9732097 TFAP2A JASPAR yes 21197751
chr17 9732082 9732097 TFAP2C JASPAR yes 21197752
chr17 9732082 9732097 TFAP2A JASPAR yes 53068150
chr17 9732082 9732097 TFAP2C JASPAR yes 53068151
chr17 9732085 9732096 TFAP2A JASPAR yes 21197753
chr17 9732085 9732096 TFAP2B JASPAR yes 21197754
chr17 9732085 9732096 TFAP2C JASPAR yes 21197755
chr17 9732085 9732096 TFAP2A JASPAR yes 53068152
chr17 9732085 9732096 TFAP2B JASPAR yes 53068153
chr17 9732085 9732096 TFAP2C JASPAR yes 53068154
chr17 9732086 9732095 TFAP2A JASPAR yes 21197756
chr17 9732086 9732095 TFAP2A JASPAR yes 53068155
chr17 9732111 9732123 IRF1 JASPAR yes 21197757
chr17 9732111 9732123 IRF1 JASPAR yes 53068156
chr17 9732116 9732124 TBX5 JASPAR yes 21197758
chr17 9732116 9732124 TBX5 JASPAR yes 53068157
chr17 9732117 9732131 RXRB JASPAR yes 21197759
chr17 9732117 9732131 RXRG JASPAR yes 21197760
chr17 9732117 9732131 RXRB JASPAR yes 53068158
chr17 9732117 9732131 RXRG JASPAR yes 53068159
chr17 9732117 9732132 NR2C2 JASPAR yes 21197761
chr17 9732117 9732132 NR2C2 JASPAR yes 53068160
chr17 9732120 9732133 NR2F1 JASPAR yes 21197762
chr17 9732120 9732133 NR2F1 JASPAR yes 53068161
chr17 9732137 9732152 MEF2A JASPAR yes 21197763
chr17 9732137 9732152 MEF2A JASPAR yes 53068162
chr17 9732138 9732153 MEF2C JASPAR yes 21197764
chr17 9732138 9732153 MEF2C JASPAR yes 53068163
chr17 9732139 9732151 MEF2A JASPAR yes 21197765
chr17 9732139 9732151 MEF2A JASPAR yes 53068164
chr17 9732141 9732145 YY1 TRANSFAC yes 21197766
chr17 9732141 9732145 YY1 TRANSFAC yes 53068165
chr17 9732146 9732160 ONECUT1 JASPAR yes 21197767
chr17 9732146 9732160 ONECUT2 JASPAR yes 21197768
chr17 9732146 9732160 ONECUT3 JASPAR yes 21197769
chr17 9732146 9732160 ONECUT1 JASPAR yes 53068166
chr17 9732146 9732160 ONECUT2 JASPAR yes 53068167
chr17 9732146 9732160 ONECUT3 JASPAR yes 53068168
chr17 9732147 9732151 TEAD2 TRANSFAC yes 21197770
chr17 9732147 9732151 TEAD2 TRANSFAC yes 53068169
chr17 9732148 9732168 TP53 JASPAR yes 21197771
chr17 9732148 9732168 TP53 JASPAR yes 53068170
chr17 9732149 9732159 CUX1 JASPAR yes 21197772
chr17 9732149 9732159 CUX2 JASPAR yes 21197773
chr17 9732149 9732159 PAX3 JASPAR yes 21197774
chr17 9732149 9732159 PAX7 JASPAR yes 21197775
chr17 9732149 9732159 CUX1 JASPAR yes 53068171
chr17 9732149 9732159 CUX2 JASPAR yes 53068172
chr17 9732149 9732159 PAX3 JASPAR yes 53068173
chr17 9732149 9732159 PAX7 JASPAR yes 53068174
chr17 9732156 9732159 MYB TRANSFAC yes 21197776
chr17 9732156 9732159 MYB TRANSFAC yes 53068175
chr17 9732165 9732174 THAP1 JASPAR yes 21197777
chr17 9732165 9732174 THAP1 JASPAR yes 53068176
chr17 9732182 9732199 RXRA JASPAR yes 21197778
chr17 9732182 9732199 RXRA JASPAR yes 53068177
chr17 9732186 9732199 SMAD2 JASPAR yes 21197779
chr17 9732186 9732199 SMAD2 JASPAR yes 53068178
chr17 9732205 9732225 TP53 JASPAR yes 21197780
chr17 9732205 9732225 TP53 JASPAR yes 53068179
SNP sites on vista23963[chr17:9731829-9732213]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 9731948 rs146519913 G A no 4745472
chr17 9731982 rs188768984 G A
SOX4
4745473
chr17 9732025 rs527681996 C T
ELK1 ETS1 HSF1 SPI1
4745474
chr17 9732097 rs151270178 G A
TFAP2A TFAP2C
4745475
chr17 9732123 rs116523023 C T
IRF1 NR2C2 NR2F1 RXRB RXRG TBX5
4745476
Genes possibly regulated by vista23963[chr17:9731829-9732213]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 9674751 9694614 - DHRS7C ENSG00000184544.7 9694614 1.0 0.0 15433 62785
chr17 9694544 9725388 - RP11-477N12.3 ENSG00000214978.6 9725388 0.0 0.91 15434 93559
chr17 9725523 9795419 + GLP2R ENSG00000065325.8 9725523 0.94 0.98 15435 93694
chr17 9799637 9808938 - RCVRN ENSG00000109047.7 9808938 0.83 1.0 15436 23275
Expression level of Genes
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miRNAs possibly regulated by vista23963[chr17:9731829-9732213]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results