EnhancerDB
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  3. vista23967[chr17:9821979-9822400]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23967[chr17:9821979-9822400]
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Tissue distribution of vista23967
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Transcription factor that possibly regulate vista23967[chr17:9821979-9822400]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 9822163 9822667 REST UCSC Txn Factor no Conserved 108238872
chr17 9822004 9822017 SMAD2 JASPAR yes 21197873
chr17 9822019 9822031 HES5 JASPAR yes 21197874
chr17 9822019 9822031 HES7 JASPAR yes 21197875
chr17 9822020 9822030 HEY1 JASPAR yes 21197876
chr17 9822020 9822030 HEY2 JASPAR yes 21197877
chr17 9822020 9822030 MAX JASPAR yes 21197878
chr17 9822020 9822030 MNT JASPAR yes 21197879
chr17 9822021 9822031 MAX JASPAR yes 21197880
chr17 9822022 9822027 MYC TRANSFAC yes 21197881
chr17 9822022 9822027 USF1 TRANSFAC yes 21197882
chr17 9822022 9822027 USF2 TRANSFAC yes 21197883
chr17 9822022 9822029 USF1 JASPAR yes 21197884
chr17 9822074 9822089 HSF1 JASPAR yes 21197885
chr17 9822075 9822088 HSF1 JASPAR yes 21197886
chr17 9822075 9822088 HSF2 JASPAR yes 21197887
chr17 9822075 9822088 HSF4 JASPAR yes 21197888
chr17 9822117 9822128 NFE2L2 JASPAR yes 21197889
chr17 9822128 9822142 RORA JASPAR yes 21197890
chr17 9822131 9822141 RORA JASPAR yes 21197891
chr17 9822136 9822140 ESR1 TRANSFAC yes 21197892
chr17 9822148 9822159 JUND JASPAR yes 21197893
chr17 9822182 9822192 ALX3 JASPAR yes 21197894
chr17 9822182 9822192 EMX1 JASPAR yes 21197895
chr17 9822182 9822192 EMX2 JASPAR yes 21197896
chr17 9822182 9822192 EN2 JASPAR yes 21197897
chr17 9822182 9822192 ESX1 JASPAR yes 21197898
chr17 9822182 9822192 GBX1 JASPAR yes 21197899
chr17 9822182 9822192 GSX1 JASPAR yes 21197900
chr17 9822182 9822192 GSX2 JASPAR yes 21197901
chr17 9822182 9822192 HOXA2 JASPAR yes 21197902
chr17 9822182 9822192 HOXB2 JASPAR yes 21197903
chr17 9822182 9822192 LBX2 JASPAR yes 21197904
chr17 9822182 9822192 LHX2 JASPAR yes 21197905
chr17 9822182 9822192 LHX6 JASPAR yes 21197906
chr17 9822182 9822192 MEOX1 JASPAR yes 21197907
chr17 9822182 9822192 MEOX2 JASPAR yes 21197908
chr17 9822182 9822192 MIXL1 JASPAR yes 21197909
chr17 9822182 9822192 NOTO JASPAR yes 21197910
chr17 9822182 9822192 POU6F1 JASPAR yes 21197911
chr17 9822183 9822191 BSX JASPAR yes 21197912
chr17 9822183 9822191 DLX6 JASPAR yes 21197913
chr17 9822183 9822191 EN1 JASPAR yes 21197914
chr17 9822183 9822191 ISX JASPAR yes 21197915
chr17 9822183 9822191 LBX1 JASPAR yes 21197916
chr17 9822183 9822191 LHX9 JASPAR yes 21197917
chr17 9822183 9822191 LMX1A JASPAR yes 21197918
chr17 9822183 9822191 LMX1B JASPAR yes 21197919
chr17 9822183 9822191 NKX6-1 JASPAR yes 21197920
chr17 9822183 9822191 NKX6-2 JASPAR yes 21197921
chr17 9822183 9822191 PAX4 JASPAR yes 21197922
chr17 9822183 9822191 PDX1 JASPAR yes 21197923
chr17 9822183 9822191 PRRX1 JASPAR yes 21197924
chr17 9822183 9822191 RAX2 JASPAR yes 21197925
chr17 9822183 9822191 SHOX JASPAR yes 21197926
chr17 9822183 9822191 UNCX JASPAR yes 21197927
chr17 9822183 9822191 VAX1 JASPAR yes 21197928
chr17 9822183 9822191 VAX2 JASPAR yes 21197929
chr17 9822183 9822191 VSX1 JASPAR yes 21197930
chr17 9822183 9822191 VSX2 JASPAR yes 21197931
chr17 9822183 9822193 POU6F2 JASPAR yes 21197932
chr17 9822194 9822206 HNF1B JASPAR yes 21197933
chr17 9822196 9822199 MYB TRANSFAC yes 21197934
chr17 9822202 9822208 PEA3 TRANSFAC yes 21197935
chr17 9822206 9822220 RORA JASPAR yes 21197936
chr17 9822209 9822219 RORA JASPAR yes 21197937
chr17 9822214 9822218 ESR1 TRANSFAC yes 21197938
chr17 9822215 9822236 REST JASPAR yes 21197939
chr17 9822219 9822223 NFE TRANSFAC yes 21197940
chr17 9822222 9822233 EBF1 JASPAR yes 21197941
chr17 9822250 9822255 SP1 TRANSFAC yes 21197942
chr17 9822251 9822261 SREBF1 JASPAR yes 21197943
chr17 9822251 9822261 SREBF2 JASPAR yes 21197944
chr17 9822252 9822265 SMAD2 JASPAR yes 21197945
chr17 9822257 9822265 TBX15 JASPAR yes 21197946
chr17 9822257 9822265 TBX1 JASPAR yes 21197947
chr17 9822257 9822265 TBX4 JASPAR yes 21197948
chr17 9822257 9822265 TBX5 JASPAR yes 21197949
chr17 9822258 9822268 ID4 JASPAR yes 21197950
chr17 9822260 9822265 USF2 TRANSFAC yes 21197951
chr17 9822264 9822269 TFAP2A TRANSFAC yes 21197952
chr17 9822264 9822270 MZF1 JASPAR yes 21197953
chr17 9822266 9822271 ETS2 TRANSFAC yes 21197954
chr17 9822270 9822282 NHLH1 JASPAR yes 21197955
chr17 9822271 9822281 MSC JASPAR yes 21197956
chr17 9822271 9822281 NHLH1 JASPAR yes 21197957
chr17 9822306 9822321 TFAP2A JASPAR yes 21197958
chr17 9822318 9822328 SREBF1 JASPAR yes 21197959
chr17 9822318 9822328 SREBF2 JASPAR yes 21197960
chr17 9822334 9822344 ID4 JASPAR yes 21197961
chr17 9822334 9822344 TCF3 JASPAR yes 21197962
chr17 9822334 9822344 TCF4 JASPAR yes 21197963
chr17 9822336 9822341 USF2 TRANSFAC yes 21197964
chr17 9822339 9822353 TLX1 JASPAR yes 21197965
chr17 9822354 9822358 NFE TRANSFAC yes 21197966
chr17 9822389 9822393 NFE TRANSFAC yes 21197967
SNP sites on vista23967[chr17:9821979-9822400]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 9822019 rs144532994 G C
HES5 HES7
4745847
chr17 9822026 rs146173412 G A
HES5 HES7 HEY1 HEY2 MAX MNT MYC USF1 USF2
4745848
chr17 9822103 rs114923151 C G no 4745849
chr17 9822188 rs9895972 T C
ALX3 BSX DLX6 EMX1 EMX2 EN1 EN2 ESX1 GBX1 GSX1 GSX2 HOXA2 HOXB2 ISX LBX1 LBX2 LHX2 LHX6 LHX9 LMX1A LMX1B MEOX1 MEOX2 MIXL1 NKX6-1 NKX6-2 NOTO PAX4 PDX1 POU6F1 POU6F2 PRRX1 RAX2 REST SHOX UNCX VAX1 VAX2 VSX1 VSX2
4745850
chr17 9822230 rs149903259 T C
EBF1 REST
4745851
chr17 9822290 rs115989110 T C
REST
4745852
chr17 9822317 rs144968744 C T
REST TFAP2A
4745853
chr17 9822346 rs112271686 T G
REST TLX1
4745854
Genes possibly regulated by vista23967[chr17:9821979-9822400]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 9694544 9725388 - RP11-477N12.3 ENSG00000214978.6 9725388 0.0 0.91 15434 3409
chr17 9725523 9795419 + GLP2R ENSG00000065325.8 9725523 0.94 0.98 15435 3544
chr17 9799637 9808938 - RCVRN ENSG00000109047.7 9808938 0.83 1.0 15436 86959
Expression level of Genes
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miRNAs possibly regulated by vista23967[chr17:9821979-9822400]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results