EnhancerDB
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  3. vista23968[chr17:9872259-9872671]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23968[chr17:9872259-9872671]
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Tissue distribution of vista23968
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Transcription factor that possibly regulate vista23968[chr17:9872259-9872671]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 9872265 9872279 POU4F1 JASPAR yes 21197968
chr17 9872265 9872279 POU4F1 JASPAR yes 53073551
chr17 9872271 9872281 HOXB13 JASPAR yes 21197969
chr17 9872271 9872281 HOXB13 JASPAR yes 53073552
chr17 9872280 9872298 SRF JASPAR yes 21197970
chr17 9872280 9872298 SRF JASPAR yes 53073553
chr17 9872282 9872298 SRF JASPAR yes 21197971
chr17 9872282 9872298 SRF JASPAR yes 53073554
chr17 9872349 9872356 JUN TRANSFAC yes 21197972
chr17 9872349 9872356 JUN TRANSFAC yes 53073555
chr17 9872350 9872365 HNF4A JASPAR yes 21197973
chr17 9872350 9872365 HNF4A JASPAR yes 53073556
chr17 9872358 9872362 H4TF2 TRANSFAC yes 21197974
chr17 9872358 9872362 H4TF2 TRANSFAC yes 53073557
chr17 9872367 9872370 MYB TRANSFAC yes 21197975
chr17 9872367 9872370 MYB TRANSFAC yes 53073558
chr17 9872370 9872382 HNF1B JASPAR yes 21197976
chr17 9872370 9872382 HNF1B JASPAR yes 53073559
chr17 9872372 9872383 JUND JASPAR yes 21197977
chr17 9872372 9872383 JUND JASPAR yes 53073560
chr17 9872374 9872380 JUN TRANSFAC yes 21197978
chr17 9872374 9872380 JUN TRANSFAC yes 53073561
chr17 9872398 9872402 ESR1 TRANSFAC yes 21197979
chr17 9872398 9872402 ESR1 TRANSFAC yes 53073562
chr17 9872404 9872416 GRHL1 JASPAR yes 21197980
chr17 9872404 9872416 GRHL1 JASPAR yes 53073563
chr17 9872405 9872415 TFCP2 JASPAR yes 21197981
chr17 9872405 9872415 TFCP2 JASPAR yes 53073564
chr17 9872409 9872414 MYC TRANSFAC yes 21197982
chr17 9872409 9872414 MYC TRANSFAC yes 53073565
chr17 9872413 9872430 RXRA JASPAR yes 21197983
chr17 9872413 9872430 RXRA JASPAR yes 53073566
chr17 9872414 9872432 ESR1 JASPAR yes 21197984
chr17 9872414 9872432 ESR1 JASPAR yes 53073567
chr17 9872415 9872430 ESR2 JASPAR yes 21197985
chr17 9872415 9872430 ESR2 JASPAR yes 53073568
chr17 9872419 9872434 JUND JASPAR yes 21197986
chr17 9872419 9872434 JUND JASPAR yes 53073569
chr17 9872421 9872435 ATF7 JASPAR yes 21197987
chr17 9872421 9872435 ATF7 JASPAR yes 53073570
chr17 9872422 9872434 JDP2 JASPAR yes 21197988
chr17 9872422 9872434 JDP2 JASPAR yes 53073571
chr17 9872422 9872437 JUND JASPAR yes 21197989
chr17 9872422 9872437 JUND JASPAR yes 53073572
chr17 9872423 9872431 NR4A2 JASPAR yes 21197990
chr17 9872423 9872431 NR4A2 JASPAR yes 53073573
chr17 9872423 9872436 JUN JASPAR yes 21197991
chr17 9872423 9872436 JUN JASPAR yes 53073574
chr17 9872424 9872432 CREB1 JASPAR yes 21197992
chr17 9872424 9872432 CREB1 JASPAR yes 53073575
chr17 9872459 9872462 MYB TRANSFAC yes 21197993
chr17 9872459 9872462 MYB TRANSFAC yes 53073576
chr17 9872464 9872479 FOXA1 JASPAR yes 21197994
chr17 9872464 9872479 FOXA1 JASPAR yes 53073577
chr17 9872466 9872478 FOXC2 JASPAR yes 21197995
chr17 9872466 9872478 FOXC2 JASPAR yes 53073578
chr17 9872467 9872478 FOXB1 JASPAR yes 21197996
chr17 9872467 9872478 FOXC1 JASPAR yes 21197997
chr17 9872467 9872478 FOXB1 JASPAR yes 53073579
chr17 9872467 9872478 FOXC1 JASPAR yes 53073580
chr17 9872467 9872479 POU3F1 JASPAR yes 21197998
chr17 9872467 9872479 POU3F1 JASPAR yes 53073581
chr17 9872467 9872480 POU3F3 JASPAR yes 21197999
chr17 9872467 9872480 POU3F3 JASPAR yes 53073582
chr17 9872468 9872479 FOXA1 JASPAR yes 21198000
chr17 9872468 9872479 FOXA1 JASPAR yes 53073583
chr17 9872468 9872480 POU2F1 JASPAR yes 21198001
chr17 9872468 9872480 POU2F1 JASPAR yes 53073584
chr17 9872469 9872478 POU3F4 JASPAR yes 21198002
chr17 9872469 9872478 POU5F1B JASPAR yes 21198003
chr17 9872469 9872478 POU3F4 JASPAR yes 53073585
chr17 9872469 9872478 POU5F1B JASPAR yes 53073586
chr17 9872470 9872484 FOXF2 JASPAR yes 21198004
chr17 9872470 9872484 FOXF2 JASPAR yes 53073587
chr17 9872472 9872483 FOXC1 JASPAR yes 21198005
chr17 9872472 9872483 FOXC1 JASPAR yes 53073588
chr17 9872475 9872483 FOXG1 JASPAR yes 21198006
chr17 9872475 9872483 FOXG1 JASPAR yes 53073589
chr17 9872498 9872509 FOXA1 JASPAR yes 21198007
chr17 9872498 9872509 FOXA1 JASPAR yes 53073590
chr17 9872500 9872511 FOXP2 JASPAR yes 21198008
chr17 9872500 9872511 FOXP2 JASPAR yes 53073591
chr17 9872530 9872551 ZNF263 JASPAR yes 21198009
chr17 9872530 9872551 ZNF263 JASPAR yes 53073592
chr17 9872533 9872544 FLI1 JASPAR yes 21198010
chr17 9872533 9872544 FLI1 JASPAR yes 53073593
chr17 9872534 9872538 YY1 TRANSFAC yes 21198011
chr17 9872534 9872538 YY1 TRANSFAC yes 53073594
chr17 9872535 9872543 FEV JASPAR yes 21198012
chr17 9872535 9872543 FEV JASPAR yes 53073595
chr17 9872537 9872542 ETS2 TRANSFAC yes 21198013
chr17 9872537 9872542 ETS2 TRANSFAC yes 53073596
chr17 9872577 9872587 SREBF2 JASPAR yes 21198014
chr17 9872577 9872587 SREBF2 JASPAR yes 53073597
chr17 9872597 9872607 TEAD1 JASPAR yes 21198015
chr17 9872597 9872607 TEAD4 JASPAR yes 21198016
chr17 9872597 9872607 TEAD1 JASPAR yes 53073598
chr17 9872597 9872607 TEAD4 JASPAR yes 53073599
chr17 9872617 9872621 NFE TRANSFAC yes 21198017
chr17 9872617 9872621 NFE TRANSFAC yes 53073600
chr17 9872623 9872633 SP1 JASPAR yes 21198018
chr17 9872623 9872633 ZNF740 JASPAR yes 21198019
chr17 9872623 9872633 SP1 JASPAR yes 53073601
chr17 9872623 9872633 ZNF740 JASPAR yes 53073602
chr17 9872625 9872631 MAZ TRANSFAC yes 21198020
chr17 9872625 9872631 MAZ TRANSFAC yes 53073603
chr17 9872626 9872636 MZF1 JASPAR yes 21198021
chr17 9872626 9872636 MZF1 JASPAR yes 53073604
chr17 9872629 9872639 SP1 JASPAR yes 21198022
chr17 9872629 9872639 SP1 JASPAR yes 53073605
chr17 9872629 9872650 ZNF263 JASPAR yes 21198023
chr17 9872629 9872650 ZNF263 JASPAR yes 53073606
chr17 9872637 9872658 IRF1 JASPAR yes 21198024
chr17 9872637 9872658 IRF1 JASPAR yes 53073607
chr17 9872640 9872654 IRF7 JASPAR yes 21198025
chr17 9872640 9872654 IRF7 JASPAR yes 53073608
chr17 9872641 9872655 STAT1 JASPAR yes 21198026
chr17 9872641 9872655 STAT1 JASPAR yes 53073609
chr17 9872641 9872656 PRDM1 JASPAR yes 21198027
chr17 9872641 9872656 STAT2 JASPAR yes 21198028
chr17 9872641 9872656 PRDM1 JASPAR yes 53073610
chr17 9872641 9872656 STAT2 JASPAR yes 53073611
chr17 9872645 9872650 ETS2 TRANSFAC yes 21198029
chr17 9872645 9872650 ETS2 TRANSFAC yes 53073612
chr17 9872653 9872666 SMAD2 JASPAR yes 21198030
chr17 9872653 9872666 SMAD2 JASPAR yes 53073613
SNP sites on vista23968[chr17:9872259-9872671]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 9872294 rs139136952 G C
SRF
4746326
chr17 9872339 rs117624457 G A no 4746327
chr17 9872342 rs181830651 G A no 4746328
chr17 9872374 rs541848716 C A
HNF1B JUN JUND
4746329
chr17 9872446 rs77173351 T C no 4746330
chr17 9872449 rs549636899 T C no 4746331
chr17 9872480 rs550886930 A T
FOXC1 FOXF2 FOXG1 POU2F1 POU3F3
4746332
chr17 9872528 rs16959117 A T no 4746333
chr17 9872606 rs16959118 A G
TEAD1 TEAD4
4746334
chr17 9872664 rs148659970 C T
SMAD2
4746335
Genes possibly regulated by vista23968[chr17:9872259-9872671]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 9799637 9808938 - RCVRN ENSG00000109047.7 9808938 0.83 1.0 15436 36679
Expression level of Genes
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miRNAs possibly regulated by vista23968[chr17:9872259-9872671]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results