EnhancerDB
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  3. vista2397[chr1:90207182-90207538]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2397[chr1:90207182-90207538]
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Tissue distribution of vista2397
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Transcription factor that possibly regulate vista2397[chr1:90207182-90207538]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90207199 90207219 RREB1 JASPAR yes 30618499
chr1 90207199 90207219 RREB1 JASPAR yes 118325847
chr1 90207200 90207220 RREB1 JASPAR yes 30618500
chr1 90207200 90207220 RREB1 JASPAR yes 118325848
chr1 90207204 90207221 ZNF410 JASPAR yes 30618501
chr1 90207204 90207221 ZNF410 JASPAR yes 118325849
chr1 90207206 90207216 HOXA13 JASPAR yes 30618502
chr1 90207206 90207216 HOXB13 JASPAR yes 30618503
chr1 90207206 90207216 HOXD13 JASPAR yes 30618504
chr1 90207206 90207216 HOXA13 JASPAR yes 118325850
chr1 90207206 90207216 HOXB13 JASPAR yes 118325851
chr1 90207206 90207216 HOXD13 JASPAR yes 118325852
chr1 90207207 90207216 CDX1 JASPAR yes 30618505
chr1 90207207 90207216 CDX1 JASPAR yes 118325853
chr1 90207211 90207221 ZNF740 JASPAR yes 30618506
chr1 90207211 90207221 ZNF740 JASPAR yes 118325854
chr1 90207227 90207245 NFYA JASPAR yes 30618507
chr1 90207227 90207245 NFYA JASPAR yes 118325855
chr1 90207255 90207268 HNF1B JASPAR yes 30618508
chr1 90207255 90207268 HNF1B JASPAR yes 118325856
chr1 90207256 90207268 HNF1B JASPAR yes 30618509
chr1 90207256 90207268 HNF1B JASPAR yes 118325857
chr1 90207259 90207272 DUXA JASPAR yes 30618510
chr1 90207259 90207272 DUXA JASPAR yes 118325858
chr1 90207260 90207271 BATF JASPAR yes 30618511
chr1 90207260 90207271 DUX4 JASPAR yes 30618512
chr1 90207260 90207271 BATF JASPAR yes 118325859
chr1 90207260 90207271 DUX4 JASPAR yes 118325860
chr1 90207261 90207272 FOSL2 JASPAR yes 30618513
chr1 90207261 90207272 FOSL2 JASPAR yes 118325861
chr1 90207263 90207274 JUNB JASPAR yes 30618514
chr1 90207263 90207274 JUNB JASPAR yes 118325862
chr1 90207263 90207277 JUN JASPAR yes 30618515
chr1 90207263 90207277 JUN JASPAR yes 118325863
chr1 90207268 90207289 ZNF263 JASPAR yes 30618516
chr1 90207268 90207289 ZNF263 JASPAR yes 118325864
chr1 90207272 90207293 ZNF263 JASPAR yes 30618517
chr1 90207272 90207293 ZNF263 JASPAR yes 118325865
chr1 90207279 90207289 SP1 JASPAR yes 30618518
chr1 90207279 90207289 SP1 JASPAR yes 118325866
chr1 90207283 90207293 MZF1 JASPAR yes 30618519
chr1 90207283 90207293 MZF1 JASPAR yes 118325867
chr1 90207286 90207292 SP1 TRANSFAC yes 30618520
chr1 90207286 90207292 SP1 TRANSFAC yes 118325868
chr1 90207286 90207296 SP1 JASPAR yes 30618521
chr1 90207286 90207296 SP1 JASPAR yes 118325869
chr1 90207286 90207300 GLIS3 JASPAR yes 30618522
chr1 90207286 90207300 GLIS3 JASPAR yes 118325870
chr1 90207290 90207302 EHF JASPAR yes 30618523
chr1 90207290 90207302 ELF1 JASPAR yes 30618524
chr1 90207290 90207302 ELF4 JASPAR yes 30618525
chr1 90207290 90207302 EHF JASPAR yes 118325871
chr1 90207290 90207302 ELF1 JASPAR yes 118325872
chr1 90207290 90207302 ELF4 JASPAR yes 118325873
chr1 90207290 90207303 ELF3 JASPAR yes 30618526
chr1 90207290 90207303 ELF3 JASPAR yes 118325874
chr1 90207291 90207302 ELF5 JASPAR yes 30618527
chr1 90207291 90207302 ELF5 JASPAR yes 118325875
chr1 90207292 90207299 ETS1 TRANSFAC yes 30618528
chr1 90207292 90207299 ETS1 TRANSFAC yes 118325876
chr1 90207292 90207302 ETV6 JASPAR yes 30618529
chr1 90207292 90207302 ETV6 JASPAR yes 118325877
chr1 90207292 90207303 ELK4 JASPAR yes 30618530
chr1 90207292 90207303 FLI1 JASPAR yes 30618531
chr1 90207292 90207303 ELK4 JASPAR yes 118325878
chr1 90207292 90207303 FLI1 JASPAR yes 118325879
chr1 90207293 90207301 EHF JASPAR yes 30618532
chr1 90207293 90207301 FEV JASPAR yes 30618533
chr1 90207293 90207301 EHF JASPAR yes 118325880
chr1 90207293 90207301 FEV JASPAR yes 118325881
chr1 90207294 90207301 SPI1 JASPAR yes 30618534
chr1 90207294 90207301 SPI1 JASPAR yes 118325882
chr1 90207298 90207319 ZNF263 JASPAR yes 30618535
chr1 90207298 90207319 ZNF263 JASPAR yes 118325883
chr1 90207301 90207322 ZNF263 JASPAR yes 30618536
chr1 90207301 90207322 ZNF263 JASPAR yes 118325884
chr1 90207304 90207309 SP1 TRANSFAC yes 30618537
chr1 90207304 90207309 SP1 TRANSFAC yes 118325885
chr1 90207306 90207311 TFAP2A TRANSFAC yes 30618538
chr1 90207306 90207311 TFAP2A TRANSFAC yes 118325886
chr1 90207306 90207312 MZF1 JASPAR yes 30618539
chr1 90207306 90207312 MZF1 JASPAR yes 118325887
chr1 90207307 90207317 SP1 JASPAR yes 30618540
chr1 90207307 90207317 SP1 JASPAR yes 118325888
chr1 90207307 90207328 ZNF263 JASPAR yes 30618541
chr1 90207307 90207328 ZNF263 JASPAR yes 118325889
chr1 90207309 90207323 SPI1 JASPAR yes 30618542
chr1 90207309 90207323 SPI1 JASPAR yes 118325890
chr1 90207310 90207320 MZF1 JASPAR yes 30618543
chr1 90207310 90207320 MZF1 JASPAR yes 118325891
chr1 90207313 90207318 TFAP2A TRANSFAC yes 30618544
chr1 90207313 90207318 TFAP2A TRANSFAC yes 118325892
chr1 90207313 90207319 MZF1 JASPAR yes 30618545
chr1 90207313 90207319 MZF1 JASPAR yes 118325893
chr1 90207315 90207320 ETS2 TRANSFAC yes 30618546
chr1 90207315 90207320 ETS2 TRANSFAC yes 118325894
chr1 90207341 90207344 MYB TRANSFAC yes 30618547
chr1 90207341 90207344 MYB TRANSFAC yes 118325895
chr1 90207345 90207353 MEIS2 JASPAR yes 30618548
chr1 90207345 90207353 MEIS3 JASPAR yes 30618549
chr1 90207345 90207353 MEIS2 JASPAR yes 118325896
chr1 90207345 90207353 MEIS3 JASPAR yes 118325897
chr1 90207346 90207350 NFE TRANSFAC yes 30618550
chr1 90207346 90207350 NFE TRANSFAC yes 118325898
chr1 90207366 90207377 USF1 JASPAR yes 30618551
chr1 90207366 90207377 USF2 JASPAR yes 30618552
chr1 90207366 90207377 USF1 JASPAR yes 118325899
chr1 90207366 90207377 USF2 JASPAR yes 118325900
chr1 90207391 90207408 BCL6B JASPAR yes 30618553
chr1 90207391 90207408 BCL6B JASPAR yes 118325901
chr1 90207420 90207430 HOXA2 JASPAR yes 30618554
chr1 90207420 90207430 NOTO JASPAR yes 30618555
chr1 90207420 90207430 HOXA2 JASPAR yes 118325902
chr1 90207420 90207430 NOTO JASPAR yes 118325903
chr1 90207421 90207435 POU1F1 JASPAR yes 30618556
chr1 90207421 90207435 POU1F1 JASPAR yes 118325904
chr1 90207422 90207434 POU3F1 JASPAR yes 30618557
chr1 90207422 90207434 POU3F2 JASPAR yes 30618558
chr1 90207422 90207434 POU3F1 JASPAR yes 118325905
chr1 90207422 90207434 POU3F2 JASPAR yes 118325906
chr1 90207422 90207435 POU3F3 JASPAR yes 30618559
chr1 90207422 90207435 POU3F3 JASPAR yes 118325907
chr1 90207423 90207427 YY1 TRANSFAC yes 30618560
chr1 90207423 90207427 YY1 TRANSFAC yes 118325908
chr1 90207423 90207435 POU2F1 JASPAR yes 30618561
chr1 90207423 90207435 POU2F1 JASPAR yes 118325909
chr1 90207424 90207433 POU3F4 JASPAR yes 30618562
chr1 90207424 90207433 POU5F1B JASPAR yes 30618563
chr1 90207424 90207433 POU3F4 JASPAR yes 118325910
chr1 90207424 90207433 POU5F1B JASPAR yes 118325911
chr1 90207431 90207437 TBP TRANSFAC yes 30618564
chr1 90207431 90207437 TBP TRANSFAC yes 118325912
chr1 90207452 90207462 RELA JASPAR yes 30618565
chr1 90207452 90207462 REL JASPAR yes 30618566
chr1 90207452 90207462 RELA JASPAR yes 118325913
chr1 90207452 90207462 REL JASPAR yes 118325914
chr1 90207455 90207470 HNF4G JASPAR yes 30618567
chr1 90207455 90207470 HNF4G JASPAR yes 118325915
chr1 90207471 90207481 MSC JASPAR yes 30618568
chr1 90207471 90207481 MSC JASPAR yes 118325916
chr1 90207501 90207516 MEF2C JASPAR yes 30618569
chr1 90207501 90207516 MEF2C JASPAR yes 118325917
chr1 90207502 90207514 SRF JASPAR yes 30618570
chr1 90207502 90207514 SRF JASPAR yes 118325918
chr1 90207502 90207517 MEF2A JASPAR yes 30618571
chr1 90207502 90207517 MEF2A JASPAR yes 118325919
chr1 90207509 90207513 TEAD2 TRANSFAC yes 30618572
chr1 90207509 90207513 TEAD2 TRANSFAC yes 118325920
chr1 90207511 90207514 MYB TRANSFAC yes 30618573
chr1 90207511 90207514 MYB TRANSFAC yes 118325921
chr1 90207535 90207539 NFE TRANSFAC yes 30618574
chr1 90207535 90207539 NFE TRANSFAC yes 118325922
SNP sites on vista2397[chr1:90207182-90207538]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90207195 rs138107115 C T no 470893
chr1 90207196 rs142681913 G A no 470894
chr1 90207370 rs113351108 A T
USF1 USF2
470895
chr1 90207443 rs111283293 G C no 470896
Genes possibly regulated by vista2397[chr1:90207182-90207538]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90286573 90402170 + LRRC8D ENSG00000171492.10 90286573 0.82 0.98 884 20965
Expression level of Genes
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miRNAs possibly regulated by vista2397[chr1:90207182-90207538]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results