EnhancerDB
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  3. vista23978[chr17:9962311-9962480]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23978[chr17:9962311-9962480]
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Tissue distribution of vista23978
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Transcription factor that possibly regulate vista23978[chr17:9962311-9962480]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 9962319 9962323 NFE TRANSFAC yes 21198435
chr17 9962319 9962323 NFE TRANSFAC yes 53081200
chr17 9962331 9962336 GATA2 JASPAR yes 21198436
chr17 9962331 9962336 GATA2 JASPAR yes 53081201
chr17 9962331 9962349 IRF2 JASPAR yes 21198437
chr17 9962331 9962349 IRF2 JASPAR yes 53081202
chr17 9962334 9962349 PRDM1 JASPAR yes 21198438
chr17 9962334 9962349 PRDM1 JASPAR yes 53081203
chr17 9962369 9962373 H4TF2 TRANSFAC yes 21198439
chr17 9962369 9962373 H4TF2 TRANSFAC yes 53081204
chr17 9962396 9962413 PAX9 JASPAR yes 21198440
chr17 9962396 9962413 PAX9 JASPAR yes 53081205
chr17 9962403 9962414 FOS JASPAR yes 21198441
chr17 9962403 9962414 FOS JASPAR yes 53081206
chr17 9962405 9962411 JUN TRANSFAC yes 21198442
chr17 9962405 9962411 JUN TRANSFAC yes 53081207
chr17 9962418 9962438 TP63 JASPAR yes 21198443
chr17 9962418 9962438 TP63 JASPAR yes 53081208
chr17 9962436 9962446 MZF1 JASPAR yes 21198444
chr17 9962436 9962446 MZF1 JASPAR yes 53081209
chr17 9962439 9962449 SP1 JASPAR yes 21198445
chr17 9962439 9962449 SP1 JASPAR yes 53081210
chr17 9962447 9962462 TFAP2A JASPAR yes 21198446
chr17 9962447 9962462 TFAP2C JASPAR yes 21198447
chr17 9962447 9962462 TFAP2A JASPAR yes 53081211
chr17 9962447 9962462 TFAP2C JASPAR yes 53081212
chr17 9962450 9962461 EBF1 JASPAR yes 21198448
chr17 9962450 9962461 EBF1 JASPAR yes 53081213
chr17 9962450 9962462 TFAP2A JASPAR yes 21198449
chr17 9962450 9962462 TFAP2B JASPAR yes 21198450
chr17 9962450 9962462 TFAP2C JASPAR yes 21198451
chr17 9962450 9962462 TFAP2A JASPAR yes 53081214
chr17 9962450 9962462 TFAP2B JASPAR yes 53081215
chr17 9962450 9962462 TFAP2C JASPAR yes 53081216
chr17 9962451 9962457 MZF1 JASPAR yes 21198452
chr17 9962451 9962457 MZF1 JASPAR yes 53081217
chr17 9962452 9962461 TFAP2A JASPAR yes 21198453
chr17 9962452 9962461 TFAP2A JASPAR yes 53081218
chr17 9962456 9962469 ZBTB18 JASPAR yes 21198454
chr17 9962456 9962469 ZBTB18 JASPAR yes 53081219
chr17 9962457 9962461 LFA1 TRANSFAC yes 21198455
chr17 9962457 9962461 LFA1 TRANSFAC yes 53081220
chr17 9962457 9962469 NHLH1 JASPAR yes 21198456
chr17 9962457 9962469 NHLH1 JASPAR yes 53081221
chr17 9962458 9962468 NHLH1 JASPAR yes 21198457
chr17 9962458 9962468 NHLH1 JASPAR yes 53081222
chr17 9962468 9962480 PKNOX1 JASPAR yes 21198458
chr17 9962468 9962480 PKNOX2 JASPAR yes 21198459
chr17 9962468 9962480 TGIF1 JASPAR yes 21198460
chr17 9962468 9962480 TGIF2 JASPAR yes 21198461
chr17 9962468 9962480 PKNOX1 JASPAR yes 53081223
chr17 9962468 9962480 PKNOX2 JASPAR yes 53081224
chr17 9962468 9962480 TGIF1 JASPAR yes 53081225
chr17 9962468 9962480 TGIF2 JASPAR yes 53081226
chr17 9962469 9962479 NEUROG2 JASPAR yes 21198462
chr17 9962469 9962479 NEUROG2 JASPAR yes 53081227
SNP sites on vista23978[chr17:9962311-9962480]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 9962312 rs8068053 A C no 4747361
chr17 9962348 rs8072084 T C
IRF2 PRDM1
4747362
chr17 9962409 rs12603691 G C
FOS JUN PAX9
4747363
chr17 9962424 rs72809315 A G
TP63
4747364
chr17 9962466 rs140635880 G C
NHLH1 ZBTB18
4747365
Genes possibly regulated by vista23978[chr17:9962311-9962480]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 10048831 10050277 + AC000003.2 ENSG00000264194.1 10048831 0.98 1.0 15438 13649
Expression level of Genes
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miRNAs possibly regulated by vista23978[chr17:9962311-9962480]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results