EnhancerDB
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  3. vista23979[chr17:9966404-9966517]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23979[chr17:9966404-9966517]
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Tissue distribution of vista23979
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Transcription factor that possibly regulate vista23979[chr17:9966404-9966517]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 9966415 9966429 SPIC JASPAR yes 21198463
chr17 9966415 9966429 SPIC JASPAR yes 53081454
chr17 9966421 9966426 ETS2 TRANSFAC yes 21198464
chr17 9966421 9966426 ETS2 TRANSFAC yes 53081455
chr17 9966431 9966445 PLAG1 JASPAR yes 21198465
chr17 9966431 9966445 PLAG1 JASPAR yes 53081456
chr17 9966432 9966447 RUNX2 JASPAR yes 21198466
chr17 9966432 9966447 RUNX2 JASPAR yes 53081457
chr17 9966438 9966458 RREB1 JASPAR yes 21198467
chr17 9966438 9966458 RREB1 JASPAR yes 53081458
chr17 9966451 9966461 RELA JASPAR yes 21198468
chr17 9966451 9966461 REL JASPAR yes 21198469
chr17 9966451 9966461 RELA JASPAR yes 53081459
chr17 9966451 9966461 REL JASPAR yes 53081460
chr17 9966451 9966462 NFKB1 JASPAR yes 21198470
chr17 9966451 9966462 NFKB1 JASPAR yes 53081461
chr17 9966451 9966464 NFKB1 JASPAR yes 21198471
chr17 9966451 9966464 NFKB2 JASPAR yes 21198472
chr17 9966451 9966464 NFKB1 JASPAR yes 53081462
chr17 9966451 9966464 NFKB2 JASPAR yes 53081463
chr17 9966452 9966462 NFKB1 JASPAR yes 21198473
chr17 9966452 9966462 RELA JASPAR yes 21198474
chr17 9966452 9966462 NFKB1 JASPAR yes 53081464
chr17 9966452 9966462 RELA JASPAR yes 53081465
chr17 9966452 9966463 NFKB1 JASPAR yes 21198475
chr17 9966452 9966463 NFKB1 JASPAR yes 53081466
chr17 9966453 9966472 CTCF JASPAR yes 21198476
chr17 9966453 9966472 CTCF JASPAR yes 53081467
chr17 9966456 9966466 MZF1 JASPAR yes 21198477
chr17 9966456 9966466 MZF1 JASPAR yes 53081468
chr17 9966464 9966471 SPIB JASPAR yes 21198478
chr17 9966464 9966471 SPIB JASPAR yes 53081469
chr17 9966466 9966481 AR JASPAR yes 21198479
chr17 9966466 9966481 AR JASPAR yes 53081470
chr17 9966500 9966506 SOX10 JASPAR yes 21198480
chr17 9966500 9966506 SOX10 JASPAR yes 53081471
SNP sites on vista23979[chr17:9966404-9966517]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 9966452 rs574459147 T C
NFKB1 NFKB2 REL RELA RREB1
4747428
chr17 9966457 rs542558177 T C
CTCF MZF1 NFKB1 NFKB2 REL RELA RREB1
4747429
chr17 9966499 rs546128102 T C no 4747430
Genes possibly regulated by vista23979[chr17:9966404-9966517]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 10048831 10050277 + AC000003.2 ENSG00000264194.1 10048831 0.98 1.0 15438 17686
Expression level of Genes
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miRNAs possibly regulated by vista23979[chr17:9966404-9966517]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results