EnhancerDB
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  3. vista2398[chr1:90221284-90221408]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2398[chr1:90221284-90221408]
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Tissue distribution of vista2398
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Transcription factor that possibly regulate vista2398[chr1:90221284-90221408]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90221267 90221285 RARA JASPAR yes 30619060
chr1 90221267 90221285 RARA JASPAR yes 118325923
chr1 90221298 90221313 STAT1 JASPAR yes 30619061
chr1 90221298 90221313 STAT1 JASPAR yes 118325924
chr1 90221300 90221311 STAT1 JASPAR yes 30619062
chr1 90221300 90221311 STAT3 JASPAR yes 30619063
chr1 90221300 90221311 STAT1 JASPAR yes 118325925
chr1 90221300 90221311 STAT3 JASPAR yes 118325926
chr1 90221301 90221309 STAT6 TRANSFAC yes 30619064
chr1 90221301 90221309 STAT6 TRANSFAC yes 118325927
chr1 90221305 90221310 ETS2 TRANSFAC yes 30619065
chr1 90221305 90221310 ETS2 TRANSFAC yes 118325928
chr1 90221316 90221328 PKNOX2 JASPAR yes 30619066
chr1 90221316 90221328 PKNOX2 JASPAR yes 118325929
chr1 90221317 90221327 NEUROG2 JASPAR yes 30619067
chr1 90221317 90221327 NEUROG2 JASPAR yes 118325930
chr1 90221325 90221336 FOS JASPAR yes 30619068
chr1 90221325 90221336 FOSL1 JASPAR yes 30619069
chr1 90221325 90221336 JUND JASPAR yes 30619070
chr1 90221325 90221336 FOS JASPAR yes 118325931
chr1 90221325 90221336 FOSL1 JASPAR yes 118325932
chr1 90221325 90221336 JUND JASPAR yes 118325933
chr1 90221326 90221340 JUN JASPAR yes 30619071
chr1 90221326 90221340 JUN JASPAR yes 118325934
chr1 90221340 90221361 ZNF263 JASPAR yes 30619072
chr1 90221340 90221361 ZNF263 JASPAR yes 118325935
chr1 90221356 90221363 SPIB JASPAR yes 30619073
chr1 90221356 90221363 SPIB JASPAR yes 118325936
chr1 90221387 90221408 IRF1 JASPAR yes 30619074
chr1 90221387 90221408 IRF1 JASPAR yes 118325937
chr1 90221401 90221417 SOX8 JASPAR yes 30619075
chr1 90221401 90221417 SOX8 JASPAR yes 118325938
SNP sites on vista2398[chr1:90221284-90221408]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista2398[chr1:90221284-90221408]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90286573 90402170 + LRRC8D ENSG00000171492.10 90286573 0.82 0.98 884 34835
Expression level of Genes
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miRNAs possibly regulated by vista2398[chr1:90221284-90221408]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results