EnhancerDB
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  3. vista23991[chr17:10039316-10039664]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23991[chr17:10039316-10039664]
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Tissue distribution of vista23991
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Transcription factor that possibly regulate vista23991[chr17:10039316-10039664]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 10039322 10039332 SP1 JASPAR yes 21199046
chr17 10039322 10039332 SP1 JASPAR yes 53091324
chr17 10039378 10039388 HOXA13 JASPAR yes 21199047
chr17 10039378 10039388 HOXA13 JASPAR yes 53091325
chr17 10039378 10039393 FOXP1 JASPAR yes 21199048
chr17 10039378 10039393 FOXP1 JASPAR yes 53091326
chr17 10039380 10039392 FOXC2 JASPAR yes 21199049
chr17 10039380 10039392 FOXC2 JASPAR yes 53091327
chr17 10039381 10039392 FOXP2 JASPAR yes 21199050
chr17 10039381 10039392 FOXP2 JASPAR yes 53091328
chr17 10039386 10039396 NEUROG2 JASPAR yes 21199051
chr17 10039386 10039396 NEUROG2 JASPAR yes 53091329
chr17 10039416 10039431 HNF1A JASPAR yes 21199052
chr17 10039416 10039431 HNF1A JASPAR yes 53091330
chr17 10039417 10039433 POU4F2 JASPAR yes 21199053
chr17 10039417 10039433 POU4F3 JASPAR yes 21199054
chr17 10039417 10039433 POU4F2 JASPAR yes 53091331
chr17 10039417 10039433 POU4F3 JASPAR yes 53091332
chr17 10039419 10039433 POU4F1 JASPAR yes 21199055
chr17 10039419 10039433 POU4F1 JASPAR yes 53091333
chr17 10039419 10039434 HNF1A JASPAR yes 21199056
chr17 10039419 10039434 HNF1A JASPAR yes 53091334
chr17 10039420 10039430 GSX1 JASPAR yes 21199057
chr17 10039420 10039430 GSX2 JASPAR yes 21199058
chr17 10039420 10039430 LHX2 JASPAR yes 21199059
chr17 10039420 10039430 LHX6 JASPAR yes 21199060
chr17 10039420 10039430 MNX1 JASPAR yes 21199061
chr17 10039420 10039430 NOTO JASPAR yes 21199062
chr17 10039420 10039430 POU6F1 JASPAR yes 21199063
chr17 10039420 10039430 RAX JASPAR yes 21199064
chr17 10039420 10039430 GSX1 JASPAR yes 53091335
chr17 10039420 10039430 GSX2 JASPAR yes 53091336
chr17 10039420 10039430 LHX2 JASPAR yes 53091337
chr17 10039420 10039430 LHX6 JASPAR yes 53091338
chr17 10039420 10039430 MNX1 JASPAR yes 53091339
chr17 10039420 10039430 NOTO JASPAR yes 53091340
chr17 10039420 10039430 POU6F1 JASPAR yes 53091341
chr17 10039420 10039430 RAX JASPAR yes 53091342
chr17 10039420 10039433 HNF1B JASPAR yes 21199065
chr17 10039420 10039433 HNF1B JASPAR yes 53091343
chr17 10039421 10039429 ISX JASPAR yes 21199066
chr17 10039421 10039429 LMX1A JASPAR yes 21199067
chr17 10039421 10039429 LMX1B JASPAR yes 21199068
chr17 10039421 10039429 NKX6-1 JASPAR yes 21199069
chr17 10039421 10039429 NKX6-2 JASPAR yes 21199070
chr17 10039421 10039429 PRRX1 JASPAR yes 21199071
chr17 10039421 10039429 RAX2 JASPAR yes 21199072
chr17 10039421 10039429 SHOX JASPAR yes 21199073
chr17 10039421 10039429 UNCX JASPAR yes 21199074
chr17 10039421 10039429 VAX1 JASPAR yes 21199075
chr17 10039421 10039429 ISX JASPAR yes 53091344
chr17 10039421 10039429 LMX1A JASPAR yes 53091345
chr17 10039421 10039429 LMX1B JASPAR yes 53091346
chr17 10039421 10039429 NKX6-1 JASPAR yes 53091347
chr17 10039421 10039429 NKX6-2 JASPAR yes 53091348
chr17 10039421 10039429 PRRX1 JASPAR yes 53091349
chr17 10039421 10039429 RAX2 JASPAR yes 53091350
chr17 10039421 10039429 SHOX JASPAR yes 53091351
chr17 10039421 10039429 UNCX JASPAR yes 53091352
chr17 10039421 10039429 VAX1 JASPAR yes 53091353
chr17 10039422 10039432 PAX3 JASPAR yes 21199076
chr17 10039422 10039432 PAX7 JASPAR yes 21199077
chr17 10039422 10039432 PAX3 JASPAR yes 53091354
chr17 10039422 10039432 PAX7 JASPAR yes 53091355
chr17 10039427 10039442 AR JASPAR yes 21199078
chr17 10039427 10039442 AR JASPAR yes 53091356
chr17 10039437 10039443 MZF1 JASPAR yes 21199079
chr17 10039437 10039443 MZF1 JASPAR yes 53091357
chr17 10039454 10039470 POU4F3 JASPAR yes 21199080
chr17 10039454 10039470 POU4F3 JASPAR yes 53091358
chr17 10039456 10039467 FOSL1 JASPAR yes 21199081
chr17 10039456 10039467 JUND JASPAR yes 21199082
chr17 10039456 10039467 FOSL1 JASPAR yes 53091359
chr17 10039456 10039467 JUND JASPAR yes 53091360
chr17 10039456 10039470 POU4F1 JASPAR yes 21199083
chr17 10039456 10039470 POU4F1 JASPAR yes 53091361
chr17 10039457 10039466 JDP2 JASPAR yes 21199084
chr17 10039457 10039466 JDP2 JASPAR yes 53091362
chr17 10039474 10039477 MYB TRANSFAC yes 21199085
chr17 10039474 10039477 MYB TRANSFAC yes 53091363
chr17 10039481 10039495 TLX1 JASPAR yes 21199086
chr17 10039481 10039495 TLX1 JASPAR yes 53091364
chr17 10039482 10039496 TLX1 JASPAR yes 21199087
chr17 10039482 10039496 TLX1 JASPAR yes 53091365
chr17 10039492 10039513 ZNF263 JASPAR yes 21199088
chr17 10039492 10039513 ZNF263 JASPAR yes 53091366
chr17 10039506 10039511 ETS2 TRANSFAC yes 21199089
chr17 10039506 10039511 ETS2 TRANSFAC yes 53091367
chr17 10039524 10039530 MZF1 JASPAR yes 21199090
chr17 10039524 10039530 MZF1 JASPAR yes 53091368
chr17 10039531 10039537 ZNF354C JASPAR yes 21199091
chr17 10039531 10039537 ZNF354C JASPAR yes 53091369
chr17 10039537 10039558 ZNF263 JASPAR yes 21199092
chr17 10039537 10039558 ZNF263 JASPAR yes 53091370
chr17 10039540 10039550 SP1 JASPAR yes 21199093
chr17 10039540 10039550 SP1 JASPAR yes 53091371
chr17 10039540 10039560 RREB1 JASPAR yes 21199094
chr17 10039540 10039560 RREB1 JASPAR yes 53091372
chr17 10039540 10039561 ZNF263 JASPAR yes 21199095
chr17 10039540 10039561 ZNF263 JASPAR yes 53091373
chr17 10039541 10039551 SP1 JASPAR yes 21199096
chr17 10039541 10039551 SP1 JASPAR yes 53091374
chr17 10039554 10039559 TFAP2A TRANSFAC yes 21199097
chr17 10039554 10039559 TFAP2A TRANSFAC yes 53091375
chr17 10039554 10039560 MZF1 JASPAR yes 21199098
chr17 10039554 10039560 MZF1 JASPAR yes 53091376
chr17 10039561 10039572 ELK4 JASPAR yes 21199099
chr17 10039561 10039572 FLI1 JASPAR yes 21199100
chr17 10039561 10039572 ELK4 JASPAR yes 53091377
chr17 10039561 10039572 FLI1 JASPAR yes 53091378
chr17 10039562 10039572 ETV6 JASPAR yes 21199101
chr17 10039562 10039572 GABPA JASPAR yes 21199102
chr17 10039562 10039572 ETV6 JASPAR yes 53091379
chr17 10039562 10039572 GABPA JASPAR yes 53091380
chr17 10039562 10039575 ELF1 JASPAR yes 21199103
chr17 10039562 10039575 ELF1 JASPAR yes 53091381
chr17 10039563 10039570 SPI1 JASPAR yes 21199104
chr17 10039563 10039570 SPI1 JASPAR yes 53091382
chr17 10039563 10039571 EHF JASPAR yes 21199105
chr17 10039563 10039571 EHF JASPAR yes 53091383
chr17 10039565 10039572 SPIB JASPAR yes 21199106
chr17 10039565 10039572 SPIB JASPAR yes 53091384
chr17 10039585 10039601 SOX8 JASPAR yes 21199107
chr17 10039585 10039601 SOX8 JASPAR yes 53091385
chr17 10039614 10039632 NR3C1 JASPAR yes 21199108
chr17 10039614 10039632 NR3C1 JASPAR yes 53091386
chr17 10039626 10039637 EBF1 JASPAR yes 21199109
chr17 10039626 10039637 EBF1 JASPAR yes 53091387
chr17 10039632 10039637 TFAP2A TRANSFAC yes 21199110
chr17 10039632 10039637 TFAP2A TRANSFAC yes 53091388
chr17 10039632 10039638 MZF1 JASPAR yes 21199111
chr17 10039632 10039638 MZF1 JASPAR yes 53091389
chr17 10039651 10039666 MEF2A JASPAR yes 21199112
chr17 10039651 10039666 MEF2A JASPAR yes 53091390
chr17 10039652 10039667 MEF2C JASPAR yes 21199113
chr17 10039652 10039667 MEF2C JASPAR yes 53091391
chr17 10039655 10039659 YY1 TRANSFAC yes 21199114
chr17 10039655 10039659 YY1 TRANSFAC yes 53091392
chr17 10039657 10039670 EOMES JASPAR yes 21199115
chr17 10039657 10039670 EOMES JASPAR yes 53091393
chr17 10039659 10039669 TBR1 JASPAR yes 21199116
chr17 10039659 10039669 TBR1 JASPAR yes 53091394
chr17 10039659 10039670 TBX2 JASPAR yes 21199117
chr17 10039659 10039670 TBX2 JASPAR yes 53091395
SNP sites on vista23991[chr17:10039316-10039664]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 10039322 rs141972820 A G
SP1
4748475
chr17 10039617 rs16959351 A C
NR3C1
4748476
chr17 10039647 rs558199252 C A no 4748477
Genes possibly regulated by vista23991[chr17:10039316-10039664]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 9813926 10101868 - GAS7 ENSG00000007237.14 10101868 0.78 1.0 15437 37796
chr17 10048831 10050277 + AC000003.2 ENSG00000264194.1 10048831 0.98 1.0 15438 90833
Expression level of Genes
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miRNAs possibly regulated by vista23991[chr17:10039316-10039664]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results