EnhancerDB
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  3. vista23993[chr17:10055314-10055664]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23993[chr17:10055314-10055664]
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Tissue distribution of vista23993
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Transcription factor that possibly regulate vista23993[chr17:10055314-10055664]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 10055376 10055652 MAX UCSC Txn Factor no Conserved 108239146
chr17 10055305 10055316 FOXH1 JASPAR yes 21199229
chr17 10055305 10055316 FOXH1 JASPAR yes 53092306
chr17 10055308 10055321 SCRT2 JASPAR yes 21199230
chr17 10055308 10055321 SCRT2 JASPAR yes 53092310
chr17 10055308 10055323 SCRT1 JASPAR yes 21199231
chr17 10055308 10055323 SCRT1 JASPAR yes 53092311
chr17 10055309 10055315 ZNF354C JASPAR yes 21199232
chr17 10055309 10055315 ZNF354C JASPAR yes 53092312
chr17 10055319 10055334 FOXA1 JASPAR yes 21199233
chr17 10055319 10055334 FOXA1 JASPAR yes 53092313
chr17 10055329 10055335 SOX10 JASPAR yes 21199234
chr17 10055329 10055335 SOX10 JASPAR yes 53092314
chr17 10055426 10055439 SMAD2 JASPAR yes 21199235
chr17 10055426 10055439 SMAD2 JASPAR yes 53092315
chr17 10055429 10055437 MEIS2 JASPAR yes 21199236
chr17 10055429 10055437 MEIS3 JASPAR yes 21199237
chr17 10055429 10055437 MEIS2 JASPAR yes 53092316
chr17 10055429 10055437 MEIS3 JASPAR yes 53092317
chr17 10055430 10055434 NFE TRANSFAC yes 21199238
chr17 10055430 10055434 NFE TRANSFAC yes 53092318
chr17 10055431 10055441 MAX JASPAR yes 21199239
chr17 10055431 10055441 MAX JASPAR yes 53092319
chr17 10055432 10055442 BHLHE40 JASPAR yes 21199240
chr17 10055432 10055442 HEY1 JASPAR yes 21199241
chr17 10055432 10055442 HEY2 JASPAR yes 21199242
chr17 10055432 10055442 MLXIPL JASPAR yes 21199243
chr17 10055432 10055442 MLX JASPAR yes 21199244
chr17 10055432 10055442 MNT JASPAR yes 21199245
chr17 10055432 10055442 TFE3 JASPAR yes 21199246
chr17 10055432 10055442 BHLHE40 JASPAR yes 53092320
chr17 10055432 10055442 HEY1 JASPAR yes 53092321
chr17 10055432 10055442 HEY2 JASPAR yes 53092322
chr17 10055432 10055442 MLXIPL JASPAR yes 53092323
chr17 10055432 10055442 MLX JASPAR yes 53092324
chr17 10055432 10055442 MNT JASPAR yes 53092325
chr17 10055432 10055442 TFE3 JASPAR yes 53092326
chr17 10055434 10055439 MYC TRANSFAC yes 21199247
chr17 10055434 10055439 USF1 TRANSFAC yes 21199248
chr17 10055434 10055439 USF2 TRANSFAC yes 21199249
chr17 10055434 10055439 MYC TRANSFAC yes 53092327
chr17 10055434 10055439 USF1 TRANSFAC yes 53092328
chr17 10055434 10055439 USF2 TRANSFAC yes 53092329
chr17 10055443 10055458 HNF4A JASPAR yes 21199250
chr17 10055443 10055458 HNF4A JASPAR yes 53092330
chr17 10055444 10055459 HNF4G JASPAR yes 21199251
chr17 10055444 10055459 NR2C2 JASPAR yes 21199252
chr17 10055444 10055459 HNF4G JASPAR yes 53092331
chr17 10055444 10055459 NR2C2 JASPAR yes 53092332
chr17 10055450 10055456 NFE2 TRANSFAC yes 21199253
chr17 10055450 10055456 NFE2 TRANSFAC yes 53092333
chr17 10055474 10055477 MYB TRANSFAC yes 21199254
chr17 10055474 10055477 MYB TRANSFAC yes 53092334
chr17 10055474 10055485 FLI1 JASPAR yes 21199255
chr17 10055474 10055485 FLI1 JASPAR yes 53092335
chr17 10055475 10055485 ETV6 JASPAR yes 21199256
chr17 10055475 10055485 ETV6 JASPAR yes 53092336
chr17 10055476 10055483 SPI1 JASPAR yes 21199257
chr17 10055476 10055483 SPI1 JASPAR yes 53092337
chr17 10055476 10055484 EHF JASPAR yes 21199258
chr17 10055476 10055484 EHF JASPAR yes 53092338
chr17 10055497 10055502 GATA1 TRANSFAC yes 21199259
chr17 10055497 10055502 GATA1 TRANSFAC yes 53092339
chr17 10055523 10055533 MAX JASPAR yes 21199260
chr17 10055523 10055533 MAX JASPAR yes 53092340
chr17 10055523 10055534 USF1 JASPAR yes 21199261
chr17 10055523 10055534 USF2 JASPAR yes 21199262
chr17 10055523 10055534 USF1 JASPAR yes 53092341
chr17 10055523 10055534 USF2 JASPAR yes 53092342
chr17 10055524 10055534 TFEB JASPAR yes 21199263
chr17 10055524 10055534 TFEC JASPAR yes 21199264
chr17 10055524 10055534 TFEB JASPAR yes 53092343
chr17 10055524 10055534 TFEC JASPAR yes 53092344
chr17 10055527 10055538 YY2 JASPAR yes 21199265
chr17 10055527 10055538 YY2 JASPAR yes 53092345
chr17 10055531 10055536 SP1 TRANSFAC yes 21199266
chr17 10055531 10055536 SP1 TRANSFAC yes 53092346
chr17 10055531 10055537 SP1 TRANSFAC yes 21199267
chr17 10055531 10055537 SP1 TRANSFAC yes 53092347
chr17 10055540 10055554 SPI1 JASPAR yes 21199268
chr17 10055540 10055554 SPIC JASPAR yes 21199269
chr17 10055540 10055554 SPI1 JASPAR yes 53092348
chr17 10055540 10055554 SPIC JASPAR yes 53092349
chr17 10055545 10055558 NFKB2 JASPAR yes 21199270
chr17 10055545 10055558 NFKB2 JASPAR yes 53092350
chr17 10055546 10055551 ETS2 TRANSFAC yes 21199271
chr17 10055546 10055551 ETS2 TRANSFAC yes 53092351
chr17 10055546 10055556 NFKB1 JASPAR yes 21199272
chr17 10055546 10055556 REL JASPAR yes 21199273
chr17 10055546 10055556 NFKB1 JASPAR yes 53092352
chr17 10055546 10055556 REL JASPAR yes 53092353
chr17 10055546 10055557 NFKB1 JASPAR yes 21199274
chr17 10055546 10055557 NFKB1 JASPAR yes 53092354
chr17 10055547 10055557 NFKB1 JASPAR yes 21199275
chr17 10055547 10055557 REL JASPAR yes 21199276
chr17 10055547 10055557 NFKB1 JASPAR yes 53092355
chr17 10055547 10055557 REL JASPAR yes 53092356
chr17 10055547 10055558 NFKB1 JASPAR yes 21199277
chr17 10055547 10055558 NFKB1 JASPAR yes 53092357
chr17 10055569 10055575 GATA3 JASPAR yes 21199278
chr17 10055569 10055575 GATA3 JASPAR yes 53092358
chr17 10055572 10055587 AR JASPAR yes 21199279
chr17 10055572 10055587 AR JASPAR yes 53092359
chr17 10055577 10055581 YY1 TRANSFAC yes 21199280
chr17 10055577 10055581 YY1 TRANSFAC yes 53092360
chr17 10055581 10055589 MEIS2 JASPAR yes 21199281
chr17 10055581 10055589 MEIS3 JASPAR yes 21199282
chr17 10055581 10055589 MEIS2 JASPAR yes 53092361
chr17 10055581 10055589 MEIS3 JASPAR yes 53092362
chr17 10055588 10055602 TCF7L2 JASPAR yes 21199283
chr17 10055588 10055602 TCF7L2 JASPAR yes 53092363
chr17 10055588 10055603 LEF1 JASPAR yes 21199284
chr17 10055588 10055603 LEF1 JASPAR yes 53092364
chr17 10055589 10055604 FOXP1 JASPAR yes 21199285
chr17 10055589 10055604 FOXP1 JASPAR yes 53092365
chr17 10055609 10055620 FOXH1 JASPAR yes 21199286
chr17 10055609 10055620 FOXH1 JASPAR yes 53092366
chr17 10055610 10055614 H1TF2 TRANSFAC yes 21199287
chr17 10055610 10055614 NFE TRANSFAC yes 21199288
chr17 10055610 10055614 SRF TRANSFAC yes 21199289
chr17 10055610 10055614 H1TF2 TRANSFAC yes 53092367
chr17 10055610 10055614 NFE TRANSFAC yes 53092368
chr17 10055610 10055614 SRF TRANSFAC yes 53092369
chr17 10055613 10055619 ZNF354C JASPAR yes 21199290
chr17 10055613 10055619 ZNF354C JASPAR yes 53092370
chr17 10055618 10055636 MAFF JASPAR yes 21199291
chr17 10055618 10055636 MAFF JASPAR yes 53092371
chr17 10055619 10055634 MAFK JASPAR yes 21199292
chr17 10055619 10055634 MAFK JASPAR yes 53092372
chr17 10055623 10055634 NRL JASPAR yes 21199293
chr17 10055623 10055634 NRL JASPAR yes 53092373
chr17 10055635 10055649 EBF1 JASPAR yes 21199294
chr17 10055635 10055649 EBF1 JASPAR yes 53092374
chr17 10055636 10055642 MZF1 JASPAR yes 21199295
chr17 10055636 10055642 MZF1 JASPAR yes 53092375
chr17 10055636 10055647 EBF1 JASPAR yes 21199296
chr17 10055636 10055647 EBF1 JASPAR yes 53092376
SNP sites on vista23993[chr17:10055314-10055664]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 10055514 rs1468086 G A
MAX
4748595
chr17 10055545 rs547187873 T C
MAX NFKB2 SPI1 SPIC
4748596
chr17 10055654 rs145284793 T C no 4748597
Genes possibly regulated by vista23993[chr17:10055314-10055664]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 9813926 10101868 - GAS7 ENSG00000007237.14 10101868 0.78 1.0 15437 53796
chr17 10048831 10050277 + AC000003.2 ENSG00000264194.1 10048831 0.98 1.0 15438 93517
Expression level of Genes
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miRNAs possibly regulated by vista23993[chr17:10055314-10055664]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results