EnhancerDB
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  3. vista2400[chr1:90226145-90226360]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2400[chr1:90226145-90226360]
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Tissue distribution of vista2400
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Transcription factor that possibly regulate vista2400[chr1:90226145-90226360]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90226129 90226405 SPI1 UCSC Txn Factor no Conserved 107813748
chr1 90226163 90226181 SRF JASPAR yes 118326001
chr1 90226165 90226181 SRF JASPAR yes 118326002
chr1 90226165 90226183 SRF JASPAR yes 118326003
chr1 90226166 90226178 SRF JASPAR yes 118326004
chr1 90226171 90226175 TEAD2 TRANSFAC yes 118326005
chr1 90226171 90226176 TBP TRANSFAC yes 118326006
chr1 90226179 90226190 EBF1 JASPAR yes 118326007
chr1 90226186 90226200 GATA2 JASPAR yes 118326008
chr1 90226190 90226198 GATA3 JASPAR yes 118326009
chr1 90226191 90226212 IRF1 JASPAR yes 118326010
chr1 90226194 90226208 SPIC JASPAR yes 118326011
chr1 90226213 90226234 ZNF263 JASPAR yes 118326012
chr1 90226225 90226243 NR3C1 JASPAR yes 118326013
chr1 90226234 90226249 STAT1 JASPAR yes 118326014
chr1 90226236 90226247 STAT1 JASPAR yes 118326015
chr1 90226236 90226247 STAT3 JASPAR yes 118326016
chr1 90226238 90226259 IRF1 JASPAR yes 118326017
chr1 90226242 90226256 SPI1 JASPAR yes 118326018
chr1 90226242 90226256 SPIC JASPAR yes 118326019
chr1 90226242 90226257 STAT2 JASPAR yes 118326020
chr1 90226243 90226256 ELF1 JASPAR yes 118326021
chr1 90226244 90226256 EHF JASPAR yes 118326022
chr1 90226244 90226256 ELF1 JASPAR yes 118326023
chr1 90226244 90226256 ELF4 JASPAR yes 118326024
chr1 90226244 90226257 ELF3 JASPAR yes 118326025
chr1 90226245 90226256 ELF5 JASPAR yes 118326026
chr1 90226245 90226256 ETV2 JASPAR yes 118326027
chr1 90226245 90226256 SPDEF JASPAR yes 118326028
chr1 90226246 90226256 ELK1 JASPAR yes 118326029
chr1 90226246 90226256 ELK3 JASPAR yes 118326030
chr1 90226246 90226256 ERF JASPAR yes 118326031
chr1 90226246 90226256 ERG JASPAR yes 118326032
chr1 90226246 90226256 ETS1 JASPAR yes 118326033
chr1 90226246 90226256 ETV1 JASPAR yes 118326034
chr1 90226246 90226256 ETV3 JASPAR yes 118326035
chr1 90226246 90226256 ETV4 JASPAR yes 118326036
chr1 90226246 90226256 ETV6 JASPAR yes 118326037
chr1 90226246 90226256 FEV JASPAR yes 118326038
chr1 90226246 90226256 FLI1 JASPAR yes 118326039
chr1 90226246 90226256 GABPA JASPAR yes 118326040
chr1 90226246 90226257 ELK4 JASPAR yes 118326041
chr1 90226246 90226257 FLI1 JASPAR yes 118326042
chr1 90226247 90226255 EHF JASPAR yes 118326043
chr1 90226247 90226255 FEV JASPAR yes 118326044
chr1 90226248 90226255 SPI1 JASPAR yes 118326045
chr1 90226273 90226284 DUX4 JASPAR yes 118326046
chr1 90226277 90226281 H1TF2 TRANSFAC yes 118326047
chr1 90226277 90226281 NFE TRANSFAC yes 118326048
chr1 90226277 90226281 SRF TRANSFAC yes 118326049
chr1 90226322 90226334 FOXI1 JASPAR yes 118326050
chr1 90226323 90226334 FOXP2 JASPAR yes 118326051
chr1 90226324 90226332 FOXG1 JASPAR yes 118326052
chr1 90226324 90226332 FOXO3 JASPAR yes 118326053
chr1 90226329 90226333 TEAD2 TRANSFAC yes 118326054
chr1 90226330 90226339 JDP2 JASPAR yes 118326055
chr1 90226338 90226354 SOX8 JASPAR yes 118326056
chr1 90226352 90226358 TCF4 TRANSFAC yes 118326057
SNP sites on vista2400[chr1:90226145-90226360]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90226191 rs75544208 G A
GATA2 GATA3 IRF1 SPI1
470969
chr1 90226224 rs576641960 G A
SPI1 ZNF263
470970
Genes possibly regulated by vista2400[chr1:90226145-90226360]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90286573 90402170 + LRRC8D ENSG00000171492.10 90286573 0.82 0.98 884 39787
Expression level of Genes
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miRNAs possibly regulated by vista2400[chr1:90226145-90226360]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results