EnhancerDB
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  3. vista24000[chr17:10220640-10220911]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24000[chr17:10220640-10220911]
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Tissue distribution of vista24000
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Transcription factor that possibly regulate vista24000[chr17:10220640-10220911]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 10220514 10220952 CTCF UCSC Txn Factor no Conserved 108239226
chr17 10220631 10221060 STAT1 UCSC Txn Factor no Conserved 108239235
chr17 10220642 10220656 IRF7 JASPAR yes 21199604
chr17 10220643 10220658 PRDM1 JASPAR yes 21199605
chr17 10220653 10220664 NFE2 JASPAR yes 21199606
chr17 10220720 10220732 GLI2 JASPAR yes 21199607
chr17 10220744 10220763 CTCF JASPAR yes 21199608
chr17 10220745 10220760 ZIC3 JASPAR yes 21199609
chr17 10220745 10220760 ZIC4 JASPAR yes 21199610
chr17 10220746 10220760 ZIC1 JASPAR yes 21199611
chr17 10220765 10220777 GLI2 JASPAR yes 21199612
chr17 10220781 10220792 FOS JASPAR yes 21199613
chr17 10220781 10220792 JUND JASPAR yes 21199614
chr17 10220782 10220796 JUN JASPAR yes 21199615
chr17 10220783 10220794 BATF JASPAR yes 21199616
chr17 10220796 10220804 EHF JASPAR yes 21199617
chr17 10220797 10220815 SRF JASPAR yes 21199618
chr17 10220798 10220803 ETS2 TRANSFAC yes 21199619
chr17 10220809 10220819 NEUROG2 JASPAR yes 21199620
chr17 10220819 10220827 NR4A2 JASPAR yes 21199621
chr17 10220820 10220837 RARA JASPAR yes 21199622
chr17 10220822 10220832 GABPA JASPAR yes 21199623
chr17 10220822 10220834 EHF JASPAR yes 21199624
chr17 10220822 10220834 ELF4 JASPAR yes 21199625
chr17 10220822 10220837 STAT1 JASPAR yes 21199626
chr17 10220824 10220830 ETS1 JASPAR yes 21199627
chr17 10220824 10220830 SPI1 JASPAR yes 21199628
chr17 10220824 10220835 STAT1 JASPAR yes 21199629
chr17 10220824 10220835 STAT3 JASPAR yes 21199630
chr17 10220859 10220873 NR2F1 JASPAR yes 21199631
chr17 10220868 10220872 ESR1 TRANSFAC yes 21199632
chr17 10220887 10220897 SMAD3 JASPAR yes 21199633
chr17 10220890 10220908 NFYA JASPAR yes 21199634
SNP sites on vista24000[chr17:10220640-10220911]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 10220670 rs73283687 G C
CTCF STAT1
4750166
chr17 10220673 rs575728520 C T
CTCF STAT1
4750167
chr17 10220687 rs80323657 C A
CTCF STAT1
4750168
chr17 10220691 rs148087946 G A,C
CTCF STAT1
4750169
chr17 10220760 rs8079253 G A
CTCF STAT1 ZIC1 ZIC3 ZIC4
4750170
Genes possibly regulated by vista24000[chr17:10220640-10220911]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 10201401 10276447 - MYH13 ENSG00000006788.8 10276447 0.97 0.0 15439 44464
Expression level of Genes
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miRNAs possibly regulated by vista24000[chr17:10220640-10220911]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results