EnhancerDB
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  3. vista24016[chr17:12568086-12568471]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24016[chr17:12568086-12568471]
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Tissue distribution of vista24016
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Transcription factor that possibly regulate vista24016[chr17:12568086-12568471]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 12568133 12568137 H4TF2 TRANSFAC yes 21200175
chr17 12568135 12568145 MNT JASPAR yes 21200176
chr17 12568136 12568143 USF1 JASPAR yes 21200177
chr17 12568136 12568146 MAX JASPAR yes 21200178
chr17 12568137 12568142 MYC TRANSFAC yes 21200179
chr17 12568137 12568142 USF1 TRANSFAC yes 21200180
chr17 12568137 12568142 USF2 TRANSFAC yes 21200181
chr17 12568163 12568173 POU6F2 JASPAR yes 21200182
chr17 12568164 12568174 ALX3 JASPAR yes 21200183
chr17 12568164 12568174 GSX1 JASPAR yes 21200184
chr17 12568164 12568174 MEOX1 JASPAR yes 21200185
chr17 12568164 12568176 MEF2A JASPAR yes 21200186
chr17 12568165 12568173 LBX1 JASPAR yes 21200187
chr17 12568165 12568173 PDX1 JASPAR yes 21200188
chr17 12568165 12568173 VAX1 JASPAR yes 21200189
chr17 12568165 12568173 VAX2 JASPAR yes 21200190
chr17 12568165 12568173 VSX1 JASPAR yes 21200191
chr17 12568165 12568173 VSX2 JASPAR yes 21200192
chr17 12568165 12568175 MEF2A JASPAR yes 21200193
chr17 12568165 12568181 POU4F2 JASPAR yes 21200194
chr17 12568200 12568211 FOSL2 JASPAR yes 21200195
chr17 12568213 12568217 YY1 TRANSFAC yes 21200196
chr17 12568217 12568220 MYB TRANSFAC yes 21200197
chr17 12568241 12568247 LEF1 TRANSFAC yes 21200198
chr17 12568241 12568247 SOX10 JASPAR yes 21200199
chr17 12568249 12568253 YY1 TRANSFAC yes 21200200
chr17 12568261 12568271 MAX JASPAR yes 21200201
chr17 12568268 12568281 EOMES JASPAR yes 21200202
chr17 12568270 12568274 TEAD2 TRANSFAC yes 21200203
chr17 12568270 12568280 TBR1 JASPAR yes 21200204
chr17 12568270 12568281 TBX20 JASPAR yes 21200205
chr17 12568270 12568281 TBX2 JASPAR yes 21200206
chr17 12568270 12568291 REST JASPAR yes 21200207
chr17 12568271 12568281 TBX21 JASPAR yes 21200208
chr17 12568271 12568290 REST JASPAR yes 21200209
chr17 12568272 12568275 MYB TRANSFAC yes 21200210
chr17 12568272 12568280 MGA JASPAR yes 21200211
chr17 12568272 12568280 TBX15 JASPAR yes 21200212
chr17 12568272 12568280 TBX1 JASPAR yes 21200213
chr17 12568272 12568280 TBX4 JASPAR yes 21200214
chr17 12568272 12568280 TBX5 JASPAR yes 21200215
chr17 12568296 12568299 MYB TRANSFAC yes 21200216
chr17 12568318 12568328 RELA JASPAR yes 21200217
chr17 12568318 12568328 REL JASPAR yes 21200218
chr17 12568318 12568329 NFKB1 JASPAR yes 21200219
chr17 12568323 12568333 MZF1 JASPAR yes 21200220
chr17 12568384 12568404 TP63 JASPAR yes 21200221
chr17 12568416 12568422 SP1 TRANSFAC yes 21200222
chr17 12568422 12568434 MEF2A JASPAR yes 21200223
chr17 12568422 12568434 MEF2D JASPAR yes 21200224
chr17 12568424 12568428 YY1 TRANSFAC yes 21200225
chr17 12568460 12568465 GATA1 TRANSFAC yes 21200226
SNP sites on vista24016[chr17:12568086-12568471]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 12568100 rs976906 G A no 4758109
chr17 12568167 rs112339099 T A
ALX3 GSX1 LBX1 MEF2A MEOX1 PDX1 POU4F2 POU6F2 VAX1 VAX2 VSX1 VSX2
4758110
chr17 12568196 rs115760313 A C no 4758111
chr17 12568259 rs180731622 G T no 4758112
chr17 12568329 rs143682269 C G
MZF1 NFKB1
4758113
chr17 12568340 rs72811258 A G no 4758114
chr17 12568341 rs186163873 C T no 4758115
chr17 12568437 rs72811260 A G no 4758116
chr17 12568453 rs147251185 C T no 4758117
Genes possibly regulated by vista24016[chr17:12568086-12568471]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 12569207 12672266 + MYOCD ENSG00000141052.13 12569207 0.93 1.0 15453 99264
chr17 12626199 12661542 + AC005358.1 ENSG00000273452.1 12626199 0.96 1.0 15454 42272
Expression level of Genes
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miRNAs possibly regulated by vista24016[chr17:12568086-12568471]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results