EnhancerDB
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  3. vista24028[chr17:13444400-13444811]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24028[chr17:13444400-13444811]
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Tissue distribution of vista24028
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Transcription factor that possibly regulate vista24028[chr17:13444400-13444811]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 13444310 13444856 EP300 UCSC Txn Factor no Conserved 108239510
chr17 13444401 13444415 GLIS3 JASPAR yes 21200614
chr17 13444401 13444415 GLIS3 JASPAR yes 53220451
chr17 13444402 13444422 RREB1 JASPAR yes 21200615
chr17 13444402 13444422 RREB1 JASPAR yes 53220452
chr17 13444410 13444415 GATA2 JASPAR yes 21200616
chr17 13444410 13444415 GATA2 JASPAR yes 53220453
chr17 13444412 13444418 MZF1 JASPAR yes 21200617
chr17 13444412 13444418 MZF1 JASPAR yes 53220454
chr17 13444412 13444426 PLAG1 JASPAR yes 21200618
chr17 13444412 13444426 PLAG1 JASPAR yes 53220455
chr17 13444436 13444451 RUNX2 JASPAR yes 21200619
chr17 13444436 13444451 RUNX2 JASPAR yes 53220456
chr17 13444439 13444450 RUNX1 JASPAR yes 21200620
chr17 13444439 13444450 RUNX1 JASPAR yes 53220457
chr17 13444440 13444450 RUNX3 JASPAR yes 21200621
chr17 13444440 13444450 RUNX3 JASPAR yes 53220458
chr17 13444441 13444450 RUNX2 JASPAR yes 21200622
chr17 13444441 13444450 RUNX2 JASPAR yes 53220459
chr17 13444469 13444475 NFIC JASPAR yes 21200623
chr17 13444469 13444475 NFIC JASPAR yes 53220460
chr17 13444476 13444481 H4TF1 TRANSFAC yes 21200624
chr17 13444476 13444481 H4TF1 TRANSFAC yes 53220461
chr17 13444476 13444490 GATA2 JASPAR yes 21200625
chr17 13444476 13444490 GATA2 JASPAR yes 53220462
chr17 13444477 13444485 FEV JASPAR yes 21200626
chr17 13444477 13444485 FEV JASPAR yes 53220463
chr17 13444482 13444486 NFE TRANSFAC yes 21200627
chr17 13444482 13444486 NFE TRANSFAC yes 53220464
chr17 13444482 13444487 GATA1 TRANSFAC yes 21200628
chr17 13444482 13444487 GATA1 TRANSFAC yes 53220465
chr17 13444482 13444488 GATA3 JASPAR yes 21200629
chr17 13444482 13444488 GATA3 JASPAR yes 53220466
chr17 13444524 13444536 INSM1 JASPAR yes 21200630
chr17 13444524 13444536 INSM1 JASPAR yes 53220467
chr17 13444541 13444555 E2F7 JASPAR yes 21200631
chr17 13444541 13444555 E2F7 JASPAR yes 53220468
chr17 13444546 13444557 CDX2 JASPAR yes 21200632
chr17 13444546 13444557 CDX2 JASPAR yes 53220469
chr17 13444548 13444557 CDX1 JASPAR yes 21200633
chr17 13444548 13444557 CDX1 JASPAR yes 53220470
chr17 13444558 13444564 TCF1 TRANSFAC yes 21200634
chr17 13444558 13444564 TCF1 TRANSFAC yes 53220471
chr17 13444598 13444609 FOSL2 JASPAR yes 21200635
chr17 13444598 13444609 JUNB JASPAR yes 21200636
chr17 13444598 13444609 FOSL2 JASPAR yes 53220472
chr17 13444598 13444609 JUNB JASPAR yes 53220473
chr17 13444599 13444610 FOS JASPAR yes 21200637
chr17 13444599 13444610 JUND JASPAR yes 21200638
chr17 13444599 13444610 FOS JASPAR yes 53220474
chr17 13444599 13444610 JUND JASPAR yes 53220475
chr17 13444610 13444615 SP1 TRANSFAC yes 21200639
chr17 13444610 13444615 SP1 TRANSFAC yes 53220476
chr17 13444613 13444631 MAFF JASPAR yes 21200640
chr17 13444613 13444631 MAFF JASPAR yes 53220477
chr17 13444615 13444630 MAFK JASPAR yes 21200641
chr17 13444615 13444630 MAFK JASPAR yes 53220478
chr17 13444615 13444636 MAFG JASPAR yes 21200642
chr17 13444615 13444636 MAFG JASPAR yes 53220479
chr17 13444619 13444630 NFE2L2 JASPAR yes 21200643
chr17 13444619 13444630 NFE2L2 JASPAR yes 53220480
chr17 13444620 13444631 JUND JASPAR yes 21200644
chr17 13444620 13444631 JUND JASPAR yes 53220481
chr17 13444622 13444628 JUN TRANSFAC yes 21200645
chr17 13444622 13444628 JUN TRANSFAC yes 53220482
chr17 13444643 13444652 PITX3 JASPAR yes 21200646
chr17 13444643 13444652 PITX3 JASPAR yes 53220483
chr17 13444643 13444653 GSC JASPAR yes 21200647
chr17 13444643 13444653 GSC JASPAR yes 53220484
chr17 13444644 13444652 RHOXF1 JASPAR yes 21200648
chr17 13444644 13444652 RHOXF1 JASPAR yes 53220485
chr17 13444653 13444668 MEF2A JASPAR yes 21200649
chr17 13444653 13444668 MEF2A JASPAR yes 53220486
chr17 13444655 13444667 MEF2A JASPAR yes 21200650
chr17 13444655 13444667 MEF2B JASPAR yes 21200651
chr17 13444655 13444667 MEF2D JASPAR yes 21200652
chr17 13444655 13444667 MEF2A JASPAR yes 53220487
chr17 13444655 13444667 MEF2B JASPAR yes 53220488
chr17 13444655 13444667 MEF2D JASPAR yes 53220489
chr17 13444656 13444666 MEF2A JASPAR yes 21200653
chr17 13444656 13444666 MEF2A JASPAR yes 53220490
chr17 13444660 13444670 PAX3 JASPAR yes 21200654
chr17 13444660 13444670 PAX7 JASPAR yes 21200655
chr17 13444660 13444670 PAX3 JASPAR yes 53220491
chr17 13444660 13444670 PAX7 JASPAR yes 53220492
chr17 13444678 13444691 SCRT2 JASPAR yes 21200656
chr17 13444678 13444691 SCRT2 JASPAR yes 53220493
chr17 13444705 13444709 YY1 TRANSFAC yes 21200657
chr17 13444705 13444709 YY1 TRANSFAC yes 53220494
chr17 13444708 13444722 SPIC JASPAR yes 21200658
chr17 13444708 13444722 SPIC JASPAR yes 53220495
chr17 13444717 13444727 HOXD13 JASPAR yes 21200659
chr17 13444717 13444727 HOXD13 JASPAR yes 53220496
chr17 13444717 13444728 HOXA10 JASPAR yes 21200660
chr17 13444717 13444728 HOXA10 JASPAR yes 53220497
chr17 13444720 13444731 PHOX2A JASPAR yes 21200661
chr17 13444720 13444731 PROP1 JASPAR yes 21200662
chr17 13444720 13444731 PHOX2A JASPAR yes 53220498
chr17 13444720 13444731 PROP1 JASPAR yes 53220499
chr17 13444734 13444737 MYB TRANSFAC yes 21200663
chr17 13444734 13444737 MYB TRANSFAC yes 53220500
chr17 13444759 13444763 NFE TRANSFAC yes 21200664
chr17 13444759 13444763 NFE TRANSFAC yes 53220501
chr17 13444802 13444807 MYC TRANSFAC yes 21200665
chr17 13444802 13444807 MYC TRANSFAC yes 53220502
chr17 13444804 13444815 DMRT3 JASPAR yes 21200666
chr17 13444804 13444815 DMRT3 JASPAR yes 53220503
SNP sites on vista24028[chr17:13444400-13444811]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 13444419 rs2190854 A G
EP300 PLAG1 RREB1
4762631
chr17 13444422 rs116638679 G A
EP300 PLAG1 RREB1
4762632
chr17 13444556 rs11650867 A G
CDX1 CDX2 EP300
4762633
chr17 13444613 rs191974506 C T
EP300 MAFF SP1
4762634
chr17 13444658 rs147373719 T A,C
EP300 MEF2A MEF2B MEF2D
4762635
chr17 13444681 rs16948063 T G
EP300 SCRT2
4762636
chr17 13444707 rs35865369 A C
EP300 YY1
4762637
Genes possibly regulated by vista24028[chr17:13444400-13444811]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 13399006 13505244 - HS3ST3A1 ENSG00000153976.2 13505244 0.87 0.92 15457 39567
Expression level of Genes
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miRNAs possibly regulated by vista24028[chr17:13444400-13444811]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results