EnhancerDB
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  3. vista2403[chr1:90309838-90310280]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2403[chr1:90309838-90310280]
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Tissue distribution of vista2403
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Transcription factor that possibly regulate vista2403[chr1:90309838-90310280]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90309833 90309848 SOX21 JASPAR yes 30625218
chr1 90309833 90309848 SOX21 JASPAR yes 118326121
chr1 90309868 90309887 REST JASPAR yes 30625219
chr1 90309868 90309887 REST JASPAR yes 118326122
chr1 90309894 90309899 ETS2 TRANSFAC yes 30625220
chr1 90309894 90309899 ETS2 TRANSFAC yes 118326123
chr1 90309896 90309917 IRF1 JASPAR yes 30625221
chr1 90309896 90309917 IRF1 JASPAR yes 118326124
chr1 90309898 90309913 STAT2 JASPAR yes 30625222
chr1 90309898 90309913 STAT2 JASPAR yes 118326125
chr1 90309899 90309913 STAT1 JASPAR yes 30625223
chr1 90309899 90309913 STAT1 JASPAR yes 118326126
chr1 90309900 90309914 IRF8 JASPAR yes 30625224
chr1 90309900 90309914 IRF8 JASPAR yes 118326127
chr1 90309900 90309915 IRF9 JASPAR yes 30625225
chr1 90309900 90309915 IRF9 JASPAR yes 118326128
chr1 90309903 90309918 MEF2C JASPAR yes 30625226
chr1 90309903 90309918 MEF2C JASPAR yes 118326129
chr1 90309907 90309918 STAT3 JASPAR yes 30625227
chr1 90309907 90309918 STAT3 JASPAR yes 118326130
chr1 90309913 90309923 RELA JASPAR yes 30625228
chr1 90309913 90309923 RELA JASPAR yes 118326131
chr1 90309927 90309933 NFIC JASPAR yes 30625229
chr1 90309927 90309933 NFIC JASPAR yes 118326132
chr1 90309938 90309954 POU4F3 JASPAR yes 30625230
chr1 90309938 90309954 POU4F3 JASPAR yes 118326133
chr1 90309939 90309955 POU4F2 JASPAR yes 30625231
chr1 90309939 90309955 POU4F3 JASPAR yes 30625232
chr1 90309939 90309955 POU4F2 JASPAR yes 118326134
chr1 90309939 90309955 POU4F3 JASPAR yes 118326135
chr1 90309941 90309955 POU4F1 JASPAR yes 30625233
chr1 90309941 90309955 POU4F1 JASPAR yes 118326136
chr1 90309959 90309969 ELK1 JASPAR yes 30625234
chr1 90309959 90309969 ELK1 JASPAR yes 118326137
chr1 90309960 90309971 ETV2 JASPAR yes 30625235
chr1 90309960 90309971 ETV2 JASPAR yes 118326138
chr1 90309961 90309971 ERF JASPAR yes 30625236
chr1 90309961 90309971 ERG JASPAR yes 30625237
chr1 90309961 90309971 ETS1 JASPAR yes 30625238
chr1 90309961 90309971 FEV JASPAR yes 30625239
chr1 90309961 90309971 FLI1 JASPAR yes 30625240
chr1 90309961 90309971 ERF JASPAR yes 118326139
chr1 90309961 90309971 ERG JASPAR yes 118326140
chr1 90309961 90309971 ETS1 JASPAR yes 118326141
chr1 90309961 90309971 FEV JASPAR yes 118326142
chr1 90309961 90309971 FLI1 JASPAR yes 118326143
chr1 90309963 90309969 ETS1 JASPAR yes 30625241
chr1 90309963 90309969 ETS1 JASPAR yes 118326144
chr1 90309995 90310013 TP73 JASPAR yes 30625242
chr1 90309995 90310013 TP73 JASPAR yes 118326145
chr1 90310033 90310036 MYB TRANSFAC yes 30625243
chr1 90310033 90310036 MYB TRANSFAC yes 118326146
chr1 90310039 90310050 RUNX1 JASPAR yes 30625244
chr1 90310039 90310050 RUNX1 JASPAR yes 118326147
chr1 90310040 90310050 RUNX3 JASPAR yes 30625245
chr1 90310040 90310050 RUNX3 JASPAR yes 118326148
chr1 90310041 90310050 RUNX2 JASPAR yes 30625246
chr1 90310041 90310050 RUNX2 JASPAR yes 118326149
chr1 90310082 90310094 POU3F1 JASPAR yes 30625247
chr1 90310082 90310094 POU3F2 JASPAR yes 30625248
chr1 90310082 90310094 POU3F1 JASPAR yes 118326150
chr1 90310082 90310094 POU3F2 JASPAR yes 118326151
chr1 90310086 90310089 MYB TRANSFAC yes 30625249
chr1 90310086 90310089 MYB TRANSFAC yes 118326152
chr1 90310111 90310122 PHOX2A JASPAR yes 30625250
chr1 90310111 90310122 PROP1 JASPAR yes 30625251
chr1 90310111 90310122 PHOX2A JASPAR yes 118326153
chr1 90310111 90310122 PROP1 JASPAR yes 118326154
chr1 90310117 90310121 YY1 TRANSFAC yes 30625252
chr1 90310117 90310121 YY1 TRANSFAC yes 118326155
chr1 90310121 90310135 TCF7L2 JASPAR yes 30625253
chr1 90310121 90310135 TCF7L2 JASPAR yes 118326156
chr1 90310121 90310136 LEF1 JASPAR yes 30625254
chr1 90310121 90310136 LEF1 JASPAR yes 118326157
chr1 90310125 90310133 LEF1 TRANSFAC yes 30625255
chr1 90310125 90310133 LEF1 TRANSFAC yes 118326158
chr1 90310126 90310141 PRDM1 JASPAR yes 30625256
chr1 90310126 90310141 PRDM1 JASPAR yes 118326159
chr1 90310128 90310149 IRF1 JASPAR yes 30625257
chr1 90310128 90310149 IRF1 JASPAR yes 118326160
chr1 90310132 90310147 PRDM1 JASPAR yes 30625258
chr1 90310132 90310147 PRDM1 JASPAR yes 118326161
chr1 90310170 90310188 IRF2 JASPAR yes 30625259
chr1 90310170 90310188 IRF2 JASPAR yes 118326162
chr1 90310171 90310192 IRF1 JASPAR yes 30625260
chr1 90310171 90310192 IRF1 JASPAR yes 118326163
chr1 90310173 90310188 PRDM1 JASPAR yes 30625261
chr1 90310173 90310188 STAT2 JASPAR yes 30625262
chr1 90310173 90310188 PRDM1 JASPAR yes 118326164
chr1 90310173 90310188 STAT2 JASPAR yes 118326165
chr1 90310174 90310188 STAT1 JASPAR yes 30625263
chr1 90310174 90310188 STAT1 JASPAR yes 118326166
chr1 90310175 90310187 IRF1 JASPAR yes 30625264
chr1 90310175 90310187 IRF1 JASPAR yes 118326167
chr1 90310265 90310269 YY1 TRANSFAC yes 30625265
chr1 90310265 90310269 YY1 TRANSFAC yes 118326168
chr1 90310278 90310282 H4TF2 TRANSFAC yes 30625266
chr1 90310278 90310282 H4TF2 TRANSFAC yes 118326169
SNP sites on vista2403[chr1:90309838-90310280]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90310183 rs72716315 C T
IRF1 IRF2 PRDM1 STAT1 STAT2
471605
Genes possibly regulated by vista2403[chr1:90309838-90310280]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90286573 90402170 + LRRC8D ENSG00000171492.10 90286573 0.82 0.98 884 76735
Expression level of Genes
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miRNAs possibly regulated by vista2403[chr1:90309838-90310280]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results