EnhancerDB
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  3. vista2404[chr1:90319744-90319959]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2404[chr1:90319744-90319959]
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Tissue distribution of vista2404
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Transcription factor that possibly regulate vista2404[chr1:90319744-90319959]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90319750 90319756 YY1 JASPAR yes 30625554
chr1 90319750 90319756 YY1 JASPAR yes 118326170
chr1 90319758 90319763 GATA2 JASPAR yes 30625555
chr1 90319758 90319763 GATA2 JASPAR yes 118326171
chr1 90319761 90319765 YY1 TRANSFAC yes 30625556
chr1 90319761 90319765 YY1 TRANSFAC yes 118326172
chr1 90319783 90319801 MAFF JASPAR yes 30625557
chr1 90319783 90319801 MAFF JASPAR yes 118326173
chr1 90319785 90319796 NRL JASPAR yes 30625558
chr1 90319785 90319796 NRL JASPAR yes 118326174
chr1 90319785 90319800 MAFK JASPAR yes 30625559
chr1 90319785 90319800 MAFK JASPAR yes 118326175
chr1 90319801 90319806 SP1 TRANSFAC yes 30625560
chr1 90319801 90319806 SP1 TRANSFAC yes 118326176
chr1 90319801 90319815 PLAG1 JASPAR yes 30625561
chr1 90319801 90319815 PLAG1 JASPAR yes 118326177
chr1 90319811 90319826 HSF1 JASPAR yes 30625562
chr1 90319811 90319826 HSF1 JASPAR yes 118326178
chr1 90319813 90319825 PKNOX2 JASPAR yes 30625563
chr1 90319813 90319825 PKNOX2 JASPAR yes 118326179
chr1 90319813 90319826 ZBTB18 JASPAR yes 30625564
chr1 90319813 90319826 ZBTB18 JASPAR yes 118326180
chr1 90319824 90319844 PPARG JASPAR yes 30625565
chr1 90319824 90319844 PPARG JASPAR yes 118326181
chr1 90319830 90319833 MYB TRANSFAC yes 30625566
chr1 90319830 90319833 MYB TRANSFAC yes 118326182
chr1 90319840 90319846 LEF1 TRANSFAC yes 30625567
chr1 90319840 90319846 SOX10 JASPAR yes 30625568
chr1 90319840 90319846 LEF1 TRANSFAC yes 118326183
chr1 90319840 90319846 SOX10 JASPAR yes 118326184
chr1 90319865 90319876 BATF JASPAR yes 30625569
chr1 90319865 90319876 BATF JASPAR yes 118326185
chr1 90319888 90319893 MYB TRANSFAC yes 30625570
chr1 90319888 90319893 MYB TRANSFAC yes 118326186
chr1 90319898 90319903 MYC TRANSFAC yes 30625571
chr1 90319898 90319903 MYC TRANSFAC yes 118326187
chr1 90319902 90319922 RREB1 JASPAR yes 30625572
chr1 90319902 90319922 RREB1 JASPAR yes 118326188
chr1 90319923 90319934 NRL JASPAR yes 30625573
chr1 90319923 90319934 NRL JASPAR yes 118326189
chr1 90319923 90319938 MAFK JASPAR yes 30625574
chr1 90319923 90319938 MAFK JASPAR yes 118326190
chr1 90319923 90319944 MAFG JASPAR yes 30625575
chr1 90319923 90319944 MAFG JASPAR yes 118326191
chr1 90319940 90319955 FOXP1 JASPAR yes 30625576
chr1 90319940 90319955 FOXP1 JASPAR yes 118326192
chr1 90319941 90319956 FOXP1 JASPAR yes 30625577
chr1 90319941 90319956 FOXP1 JASPAR yes 118326193
chr1 90319942 90319957 FOXP1 JASPAR yes 30625578
chr1 90319942 90319957 FOXP1 JASPAR yes 118326194
SNP sites on vista2404[chr1:90319744-90319959]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90319847 rs184331723 A G no 471644
chr1 90319940 rs11379936 A AT
FOXP1 MAFG
471645
chr1 90319940 rs397688080 A AT
FOXP1 MAFG
471646
chr1 90319940 rs560811152 A AT
FOXP1 MAFG
471647
Genes possibly regulated by vista2404[chr1:90319744-90319959]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90286573 90402170 + LRRC8D ENSG00000171492.10 90286573 0.82 0.98 884 66829
Expression level of Genes
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miRNAs possibly regulated by vista2404[chr1:90319744-90319959]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results