EnhancerDB
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  3. vista2405[chr1:90321378-90321621]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2405[chr1:90321378-90321621]
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Tissue distribution of vista2405
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Transcription factor that possibly regulate vista2405[chr1:90321378-90321621]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90321294 90321610 NFIC UCSC Txn Factor no Conserved 107813780
chr1 90321333 90321639 RUNX3 UCSC Txn Factor no Conserved 107813784
chr1 90321362 90321381 RFX2 JASPAR yes 30625760
chr1 90321362 90321381 RFX2 JASPAR yes 118326195
chr1 90321376 90321387 ETV2 JASPAR yes 30625761
chr1 90321376 90321387 ETV2 JASPAR yes 118326196
chr1 90321377 90321395 NR3C1 JASPAR yes 30625762
chr1 90321377 90321395 NR3C1 JASPAR yes 118326197
chr1 90321391 90321406 MEF2C JASPAR yes 30625763
chr1 90321391 90321406 MEF2C JASPAR yes 118326198
chr1 90321392 90321407 MEF2A JASPAR yes 30625764
chr1 90321392 90321407 MEF2A JASPAR yes 118326199
chr1 90321393 90321405 MEF2A JASPAR yes 30625765
chr1 90321393 90321405 MEF2D JASPAR yes 30625766
chr1 90321393 90321405 MEF2A JASPAR yes 118326200
chr1 90321393 90321405 MEF2D JASPAR yes 118326201
chr1 90321431 90321435 H1TF2 TRANSFAC yes 30625767
chr1 90321431 90321435 NFE TRANSFAC yes 30625768
chr1 90321431 90321435 SRF TRANSFAC yes 30625769
chr1 90321431 90321435 H1TF2 TRANSFAC yes 118326202
chr1 90321431 90321435 NFE TRANSFAC yes 118326203
chr1 90321431 90321435 SRF TRANSFAC yes 118326204
chr1 90321431 90321437 NFYC TRANSFAC yes 30625770
chr1 90321431 90321437 NFYC TRANSFAC yes 118326205
chr1 90321436 90321450 TCF7L2 JASPAR yes 30625771
chr1 90321436 90321450 TCF7L2 JASPAR yes 118326206
chr1 90321436 90321451 LEF1 JASPAR yes 30625772
chr1 90321436 90321451 LEF1 JASPAR yes 118326207
chr1 90321437 90321455 RARA JASPAR yes 30625773
chr1 90321437 90321455 RARA JASPAR yes 118326208
chr1 90321447 90321464 PAX1 JASPAR yes 30625774
chr1 90321447 90321464 PAX9 JASPAR yes 30625775
chr1 90321447 90321464 PAX1 JASPAR yes 118326209
chr1 90321447 90321464 PAX9 JASPAR yes 118326210
chr1 90321448 90321462 PAX6 JASPAR yes 30625776
chr1 90321448 90321462 PAX6 JASPAR yes 118326211
chr1 90321477 90321488 BATF JASPAR yes 30625777
chr1 90321477 90321488 BATF JASPAR yes 118326212
chr1 90321482 90321486 YY1 TRANSFAC yes 30625778
chr1 90321482 90321486 YY1 TRANSFAC yes 118326213
chr1 90321489 90321504 RUNX2 JASPAR yes 30625779
chr1 90321489 90321504 RUNX2 JASPAR yes 118326214
chr1 90321490 90321493 MYB TRANSFAC yes 30625780
chr1 90321490 90321493 MYB TRANSFAC yes 118326215
chr1 90321490 90321499 RUNX2 JASPAR yes 30625781
chr1 90321490 90321499 RUNX2 JASPAR yes 118326216
chr1 90321490 90321500 RUNX3 JASPAR yes 30625782
chr1 90321490 90321500 RUNX3 JASPAR yes 118326217
chr1 90321490 90321501 RUNX1 JASPAR yes 30625783
chr1 90321490 90321501 RUNX1 JASPAR yes 118326218
chr1 90321513 90321533 RREB1 JASPAR yes 30625784
chr1 90321513 90321533 RREB1 JASPAR yes 118326219
chr1 90321518 90321538 RREB1 JASPAR yes 30625785
chr1 90321518 90321538 RREB1 JASPAR yes 118326220
chr1 90321530 90321536 TCF4 TRANSFAC yes 30625786
chr1 90321530 90321536 TCF4 TRANSFAC yes 118326221
chr1 90321555 90321571 POU4F3 JASPAR yes 30625787
chr1 90321555 90321571 POU4F3 JASPAR yes 118326222
chr1 90321557 90321565 FOXL1 JASPAR yes 30625788
chr1 90321557 90321565 FOXL1 JASPAR yes 118326223
chr1 90321557 90321571 POU4F1 JASPAR yes 30625789
chr1 90321557 90321571 POU4F1 JASPAR yes 118326224
chr1 90321561 90321565 TEAD2 TRANSFAC yes 30625790
chr1 90321561 90321565 TEAD2 TRANSFAC yes 118326225
chr1 90321565 90321580 AR JASPAR yes 30625791
chr1 90321565 90321580 AR JASPAR yes 118326226
chr1 90321580 90321586 NFIC JASPAR yes 30625792
chr1 90321580 90321586 NFIC JASPAR yes 118326227
chr1 90321586 90321590 YY1 TRANSFAC yes 30625793
chr1 90321586 90321590 YY1 TRANSFAC yes 118326228
chr1 90321614 90321618 NFE TRANSFAC yes 30625794
chr1 90321614 90321618 NFE TRANSFAC yes 118326229
chr1 90321614 90321619 GATA1 TRANSFAC yes 30625795
chr1 90321614 90321619 GATA1 TRANSFAC yes 118326230
chr1 90321614 90321620 GATA3 JASPAR yes 30625796
chr1 90321614 90321620 GATA3 JASPAR yes 118326231
SNP sites on vista2405[chr1:90321378-90321621]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90321527 rs12083359 T G
NFIC RREB1 RUNX3
471659
Genes possibly regulated by vista2405[chr1:90321378-90321621]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90286573 90402170 + LRRC8D ENSG00000171492.10 90286573 0.82 0.98 884 65195
Expression level of Genes
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miRNAs possibly regulated by vista2405[chr1:90321378-90321621]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results