EnhancerDB
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  3. vista24237[chr17:25410571-25410806]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24237[chr17:25410571-25410806]
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Tissue distribution of vista24237
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Transcription factor that possibly regulate vista24237[chr17:25410571-25410806]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 25406092 25412362 POLR2A UCSC Txn Factor no Conserved 108244720
chr17 25406092 25412362 POLR2A UCSC Txn Factor no Conserved 108244721
chr17 25410584 25410601 RXRA JASPAR yes 21210537
chr17 25410585 25410589 LFA1 TRANSFAC yes 21210538
chr17 25410591 25410609 NFYA JASPAR yes 21210539
chr17 25410594 25410602 MEIS2 JASPAR yes 21210540
chr17 25410594 25410602 MEIS3 JASPAR yes 21210541
chr17 25410594 25410610 NFYA JASPAR yes 21210542
chr17 25410595 25410599 NFE TRANSFAC yes 21210543
chr17 25410597 25410612 NFYB JASPAR yes 21210544
chr17 25410606 25410625 CTCF JASPAR yes 21210545
chr17 25410608 25410627 CTCF JASPAR yes 21210546
chr17 25410619 25410631 PKNOX2 JASPAR yes 21210547
chr17 25410619 25410631 TGIF1 JASPAR yes 21210548
chr17 25410619 25410631 TGIF2 JASPAR yes 21210549
chr17 25410654 25410661 NKX3-1 JASPAR yes 21210550
chr17 25410654 25410668 POU1F1 JASPAR yes 21210551
chr17 25410655 25410667 POU3F1 JASPAR yes 21210552
chr17 25410655 25410667 POU3F2 JASPAR yes 21210553
chr17 25410655 25410668 POU3F3 JASPAR yes 21210554
chr17 25410655 25410672 ZNF410 JASPAR yes 21210555
chr17 25410656 25410668 POU2F1 JASPAR yes 21210556
chr17 25410659 25410662 MYB TRANSFAC yes 21210557
chr17 25410682 25410686 NFE TRANSFAC yes 21210558
chr17 25410689 25410698 HIC2 JASPAR yes 21210559
chr17 25410692 25410696 LFA1 TRANSFAC yes 21210560
chr17 25410694 25410710 GLIS1 JASPAR yes 21210561
chr17 25410699 25410711 ZBTB7A JASPAR yes 21210562
chr17 25410701 25410706 SP1 TRANSFAC yes 21210563
chr17 25410761 25410772 EBF1 JASPAR yes 21210564
chr17 25410768 25410772 LFA1 TRANSFAC yes 21210565
chr17 25410778 25410793 AR JASPAR yes 21210566
SNP sites on vista24237[chr17:25410571-25410806]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 25410579 rs147956334 G A
POLR2A
4805743
chr17 25410639 rs11652017 T C
POLR2A
4805744
chr17 25410647 rs184509198 G A,C
POLR2A
4805745
chr17 25410679 rs141903718 C T
POLR2A
4805746
chr17 25410687 rs59585582 C G
POLR2A
4805747
chr17 25410690 rs376182503 T C
HIC2 POLR2A
4805748
chr17 25410709 rs529528581 G A
GLIS1 POLR2A ZBTB7A
4805749
chr17 25410718 rs113475964 A G
POLR2A
4805750
chr17 25410734 rs11650889 A G
POLR2A
4805751
Genes possibly regulated by vista24237[chr17:25410571-25410806]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista24237[chr17:25410571-25410806]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results