EnhancerDB
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  3. vista24243[chr17:25558342-25558695]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24243[chr17:25558342-25558695]
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Tissue distribution of vista24243
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Transcription factor that possibly regulate vista24243[chr17:25558342-25558695]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 25558357 25558367 TFE3 JASPAR yes 21210793
chr17 25558359 25558364 MYC TRANSFAC yes 21210794
chr17 25558359 25558364 USF1 TRANSFAC yes 21210795
chr17 25558359 25558364 USF2 TRANSFAC yes 21210796
chr17 25558359 25558366 USF1 JASPAR yes 21210797
chr17 25558365 25558371 PEA3 TRANSFAC yes 21210798
chr17 25558367 25558377 NFKB1 JASPAR yes 21210799
chr17 25558371 25558385 EBF1 JASPAR yes 21210800
chr17 25558397 25558414 RXRA JASPAR yes 21210801
chr17 25558434 25558454 ESR1 JASPAR yes 21210802
chr17 25558437 25558455 ESR1 JASPAR yes 21210803
chr17 25558438 25558455 ESR1 JASPAR yes 21210804
chr17 25558445 25558452 SP1 TRANSFAC yes 21210805
chr17 25558445 25558455 SP1 JASPAR yes 21210806
chr17 25558446 25558453 SP1 TRANSFAC yes 21210807
chr17 25558447 25558452 SP1 TRANSFAC yes 21210808
chr17 25558447 25558453 SP1 TRANSFAC yes 21210809
chr17 25558447 25558454 SP1 TRANSFAC yes 21210810
chr17 25558448 25558459 TFAP2A JASPAR yes 21210811
chr17 25558448 25558459 TFAP2B JASPAR yes 21210812
chr17 25558448 25558459 TFAP2C JASPAR yes 21210813
chr17 25558449 25558458 TFAP2A JASPAR yes 21210814
chr17 25558457 25558461 NFE TRANSFAC yes 21210815
chr17 25558462 25558483 ZNF263 JASPAR yes 21210816
chr17 25558485 25558489 NFE TRANSFAC yes 21210817
chr17 25558503 25558511 HOXA5 JASPAR yes 21210818
chr17 25558509 25558522 HSF2 JASPAR yes 21210819
chr17 25558529 25558545 SOX4 JASPAR yes 21210820
chr17 25558550 25558565 STAT2 JASPAR yes 21210821
chr17 25558551 25558565 STAT1 JASPAR yes 21210822
chr17 25558552 25558563 ETV2 JASPAR yes 21210823
chr17 25558554 25558560 ETS1 JASPAR yes 21210824
chr17 25558559 25558575 RFX5 JASPAR yes 21210825
chr17 25558560 25558579 RFX2 JASPAR yes 21210826
chr17 25558570 25558573 MYB TRANSFAC yes 21210827
chr17 25558586 25558596 HOXA13 JASPAR yes 21210828
chr17 25558586 25558596 HOXB13 JASPAR yes 21210829
chr17 25558586 25558596 HOXD13 JASPAR yes 21210830
chr17 25558612 25558632 RREB1 JASPAR yes 21210831
chr17 25558615 25558635 RREB1 JASPAR yes 21210832
chr17 25558616 25558636 RREB1 JASPAR yes 21210833
chr17 25558621 25558641 RREB1 JASPAR yes 21210834
chr17 25558623 25558628 SP1 TRANSFAC yes 21210835
chr17 25558624 25558634 ZNF740 JASPAR yes 21210836
chr17 25558624 25558638 PLAG1 JASPAR yes 21210837
chr17 25558626 25558636 SP1 JASPAR yes 21210838
chr17 25558626 25558647 ZNF263 JASPAR yes 21210839
chr17 25558628 25558648 RREB1 JASPAR yes 21210840
chr17 25558629 25558634 SP1 TRANSFAC yes 21210841
chr17 25558632 25558642 SP1 JASPAR yes 21210842
chr17 25558643 25558654 CEBPA JASPAR yes 21210843
chr17 25558644 25558655 CEBPB JASPAR yes 21210844
chr17 25558645 25558663 NFYA JASPAR yes 21210845
chr17 25558647 25558651 LFA1 TRANSFAC yes 21210846
chr17 25558657 25558668 E2F4 JASPAR yes 21210847
chr17 25558657 25558668 E2F6 JASPAR yes 21210848
chr17 25558658 25558669 E2F1 JASPAR yes 21210849
chr17 25558675 25558686 NFKB1 JASPAR yes 21210850
chr17 25558676 25558686 NFKB1 JASPAR yes 21210851
chr17 25558681 25558687 MZF1 JASPAR yes 21210852
SNP sites on vista24243[chr17:25558342-25558695]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 25558357 rs150882044 T C
TFE3
4806275
chr17 25558358 rs552460813 C T
TFE3
4806276
chr17 25558440 rs182267294 G T
ESR1
4806277
chr17 25558632 rs539613297 T G
PLAG1 RREB1 SP1 ZNF263 ZNF740
4806278
chr17 25558664 rs139291491 C T
E2F1 E2F4 E2F6
4806279
Genes possibly regulated by vista24243[chr17:25558342-25558695]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 25621102 25640657 + WSB1 ENSG00000109046.10 25621102 0.8 1.0 15553 37593
Expression level of Genes
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miRNAs possibly regulated by vista24243[chr17:25558342-25558695]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results