EnhancerDB
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  3. vista24257[chr17:25691108-25691369]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24257[chr17:25691108-25691369]
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Tissue distribution of vista24257
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Transcription factor that possibly regulate vista24257[chr17:25691108-25691369]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 25691124 25691142 RARA JASPAR yes 21211576
chr17 25691124 25691142 RARA JASPAR yes 53624760
chr17 25691151 25691155 NFE TRANSFAC yes 21211577
chr17 25691151 25691155 NFE TRANSFAC yes 53624761
chr17 25691151 25691156 GATA1 TRANSFAC yes 21211578
chr17 25691151 25691156 GATA1 TRANSFAC yes 53624762
chr17 25691151 25691157 GATA3 JASPAR yes 21211579
chr17 25691151 25691157 GATA3 JASPAR yes 53624763
chr17 25691157 25691171 TCF7L2 JASPAR yes 21211580
chr17 25691157 25691171 TCF7L2 JASPAR yes 53624764
chr17 25691173 25691180 SPIB JASPAR yes 21211581
chr17 25691173 25691180 SPIB JASPAR yes 53624765
chr17 25691174 25691195 ZNF263 JASPAR yes 21211582
chr17 25691174 25691195 ZNF263 JASPAR yes 53624766
chr17 25691200 25691209 NFIX JASPAR yes 21211583
chr17 25691200 25691209 NFIX JASPAR yes 53624767
chr17 25691202 25691208 NFIC JASPAR yes 21211584
chr17 25691202 25691208 NFIC JASPAR yes 53624768
chr17 25691239 25691246 MEIS1 JASPAR yes 21211585
chr17 25691239 25691246 MEIS1 JASPAR yes 53624769
chr17 25691239 25691247 MEIS2 JASPAR yes 21211586
chr17 25691239 25691247 MEIS2 JASPAR yes 53624770
chr17 25691242 25691257 JUND JASPAR yes 21211587
chr17 25691242 25691257 JUND JASPAR yes 53624771
chr17 25691243 25691256 JUN JASPAR yes 21211588
chr17 25691243 25691256 JUN JASPAR yes 53624772
chr17 25691247 25691255 CREB1 JASPAR yes 21211589
chr17 25691247 25691255 CREB1 JASPAR yes 53624773
chr17 25691249 25691266 RARA JASPAR yes 21211590
chr17 25691249 25691266 RARA JASPAR yes 53624774
chr17 25691250 25691254 ESR1 TRANSFAC yes 21211591
chr17 25691250 25691254 ESR1 TRANSFAC yes 53624775
chr17 25691254 25691271 RXRA JASPAR yes 21211592
chr17 25691254 25691271 RXRA JASPAR yes 53624776
chr17 25691262 25691272 NHLH1 JASPAR yes 21211593
chr17 25691262 25691272 NHLH1 JASPAR yes 53624777
chr17 25691304 25691318 NR2F1 JASPAR yes 21211594
chr17 25691304 25691318 NR2F1 JASPAR yes 53624778
chr17 25691313 25691317 ESR1 TRANSFAC yes 21211595
chr17 25691313 25691317 ESR1 TRANSFAC yes 53624779
chr17 25691314 25691330 SOX8 JASPAR yes 21211596
chr17 25691314 25691330 SOX8 JASPAR yes 53624780
chr17 25691339 25691360 ZNF263 JASPAR yes 21211597
chr17 25691339 25691360 ZNF263 JASPAR yes 53624781
chr17 25691340 25691346 MZF1 JASPAR yes 21211598
chr17 25691340 25691346 MZF1 JASPAR yes 53624782
chr17 25691358 25691379 ZNF263 JASPAR yes 21211599
chr17 25691358 25691379 ZNF263 JASPAR yes 53624783
SNP sites on vista24257[chr17:25691108-25691369]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 25691145 rs322207 T G no 4807246
chr17 25691175 rs149172259 T C
SPIB ZNF263
4807247
chr17 25691209 rs73982781 G T
NFIX
4807248
chr17 25691296 rs11080143 C T no 4807249
chr17 25691314 rs139080042 G C
ESR1 NR2F1 SOX8
4807250
chr17 25691319 rs73982782 T C
SOX8
4807251
Genes possibly regulated by vista24257[chr17:25691108-25691369]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 25621102 25640657 + WSB1 ENSG00000109046.10 25621102 0.8 1.0 15553 29994
chr17 25783670 25953461 + KSR1 ENSG00000141068.9 25783670 0.82 0.99 15554 7699
Expression level of Genes
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miRNAs possibly regulated by vista24257[chr17:25691108-25691369]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results