EnhancerDB
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  3. vista24259[chr17:25784873-25785075]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24259[chr17:25784873-25785075]
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Tissue distribution of vista24259
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Transcription factor that possibly regulate vista24259[chr17:25784873-25785075]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 25784568 25785138 POLR2A UCSC Txn Factor no Conserved 108245436
chr17 25784862 25784875 ZBTB18 JASPAR yes 21211657
chr17 25784862 25784875 ZBTB18 JASPAR yes 53631649
chr17 25784870 25784885 ZIC3 JASPAR yes 21211658
chr17 25784870 25784885 ZIC4 JASPAR yes 21211659
chr17 25784870 25784885 ZIC3 JASPAR yes 53631650
chr17 25784870 25784885 ZIC4 JASPAR yes 53631651
chr17 25784878 25784898 TP53 JASPAR yes 21211660
chr17 25784878 25784898 TP53 JASPAR yes 53631652
chr17 25784881 25784901 RREB1 JASPAR yes 21211661
chr17 25784881 25784901 RREB1 JASPAR yes 53631653
chr17 25784885 25784890 TFAP2A TRANSFAC yes 21211662
chr17 25784885 25784890 TFAP2A TRANSFAC yes 53631654
chr17 25784885 25784891 MZF1 JASPAR yes 21211663
chr17 25784885 25784891 MZF1 JASPAR yes 53631655
chr17 25784893 25784899 TCF4 TRANSFAC yes 21211664
chr17 25784893 25784899 TCF4 TRANSFAC yes 53631656
chr17 25784897 25784907 HOXA13 JASPAR yes 21211665
chr17 25784897 25784907 HOXB13 JASPAR yes 21211666
chr17 25784897 25784907 HOXD13 JASPAR yes 21211667
chr17 25784897 25784907 HOXA13 JASPAR yes 53631657
chr17 25784897 25784907 HOXB13 JASPAR yes 53631658
chr17 25784897 25784907 HOXD13 JASPAR yes 53631659
chr17 25784897 25784908 HOXA10 JASPAR yes 21211668
chr17 25784897 25784908 HOXA10 JASPAR yes 53631660
chr17 25784898 25784907 CDX1 JASPAR yes 21211669
chr17 25784898 25784907 CDX1 JASPAR yes 53631661
chr17 25784898 25784909 CDX2 JASPAR yes 21211670
chr17 25784898 25784909 CDX2 JASPAR yes 53631662
chr17 25784907 25784928 ZNF263 JASPAR yes 21211671
chr17 25784907 25784928 ZNF263 JASPAR yes 53631663
chr17 25784918 25784928 SP1 JASPAR yes 21211672
chr17 25784918 25784928 SP1 JASPAR yes 53631664
chr17 25784919 25784940 ZNF263 JASPAR yes 21211673
chr17 25784919 25784940 ZNF263 JASPAR yes 53631665
chr17 25784921 25784933 INSM1 JASPAR yes 21211674
chr17 25784921 25784933 INSM1 JASPAR yes 53631666
chr17 25784922 25784936 PLAG1 JASPAR yes 21211675
chr17 25784922 25784936 PLAG1 JASPAR yes 53631667
chr17 25784923 25784943 RREB1 JASPAR yes 21211676
chr17 25784923 25784943 RREB1 JASPAR yes 53631668
chr17 25784925 25784945 RREB1 JASPAR yes 21211677
chr17 25784925 25784945 RREB1 JASPAR yes 53631669
chr17 25784930 25784940 SP1 JASPAR yes 21211678
chr17 25784930 25784940 SP1 JASPAR yes 53631670
chr17 25784931 25784941 SP1 JASPAR yes 21211679
chr17 25784931 25784941 SP1 JASPAR yes 53631671
chr17 25784931 25784952 ZNF263 JASPAR yes 21211680
chr17 25784931 25784952 ZNF263 JASPAR yes 53631672
chr17 25784936 25784945 SP1 TRANSFAC yes 21211681
chr17 25784936 25784945 SP1 TRANSFAC yes 53631673
chr17 25784937 25784943 SP1 TRANSFAC yes 21211682
chr17 25784937 25784943 SP1 TRANSFAC yes 53631674
chr17 25784937 25784947 SP1 JASPAR yes 21211683
chr17 25784937 25784947 SP1 JASPAR yes 53631675
chr17 25784938 25784945 SP1 TRANSFAC yes 21211684
chr17 25784938 25784945 SP1 TRANSFAC yes 53631676
chr17 25784939 25784944 SP1 TRANSFAC yes 21211685
chr17 25784939 25784944 SP1 TRANSFAC yes 53631677
chr17 25784939 25784945 SP1 TRANSFAC yes 21211686
chr17 25784939 25784945 SP1 TRANSFAC yes 53631678
chr17 25784951 25784961 EMX2 JASPAR yes 21211687
chr17 25784951 25784961 EN2 JASPAR yes 21211688
chr17 25784951 25784961 EVX1 JASPAR yes 21211689
chr17 25784951 25784961 EVX2 JASPAR yes 21211690
chr17 25784951 25784961 GBX1 JASPAR yes 21211691
chr17 25784951 25784961 GBX2 JASPAR yes 21211692
chr17 25784951 25784961 HESX1 JASPAR yes 21211693
chr17 25784951 25784961 HOXB3 JASPAR yes 21211694
chr17 25784951 25784961 LBX2 JASPAR yes 21211695
chr17 25784951 25784961 RAX JASPAR yes 21211696
chr17 25784951 25784961 EMX2 JASPAR yes 53631679
chr17 25784951 25784961 EN2 JASPAR yes 53631680
chr17 25784951 25784961 EVX1 JASPAR yes 53631681
chr17 25784951 25784961 EVX2 JASPAR yes 53631682
chr17 25784951 25784961 GBX1 JASPAR yes 53631683
chr17 25784951 25784961 GBX2 JASPAR yes 53631684
chr17 25784951 25784961 HESX1 JASPAR yes 53631685
chr17 25784951 25784961 HOXB3 JASPAR yes 53631686
chr17 25784951 25784961 LBX2 JASPAR yes 53631687
chr17 25784951 25784961 RAX JASPAR yes 53631688
chr17 25784952 25784960 BARX1 JASPAR yes 21211697
chr17 25784952 25784960 EN1 JASPAR yes 21211698
chr17 25784952 25784960 ISL2 JASPAR yes 21211699
chr17 25784952 25784960 MSX1 JASPAR yes 21211700
chr17 25784952 25784960 MSX2 JASPAR yes 21211701
chr17 25784952 25784960 PDX1 JASPAR yes 21211702
chr17 25784952 25784960 BARX1 JASPAR yes 53631689
chr17 25784952 25784960 EN1 JASPAR yes 53631690
chr17 25784952 25784960 ISL2 JASPAR yes 53631691
chr17 25784952 25784960 MSX1 JASPAR yes 53631692
chr17 25784952 25784960 MSX2 JASPAR yes 53631693
chr17 25784952 25784960 PDX1 JASPAR yes 53631694
chr17 25784963 25784975 PKNOX1 JASPAR yes 21211703
chr17 25784963 25784975 PKNOX2 JASPAR yes 21211704
chr17 25784963 25784975 TGIF1 JASPAR yes 21211705
chr17 25784963 25784975 TGIF2 JASPAR yes 21211706
chr17 25784963 25784975 PKNOX1 JASPAR yes 53631695
chr17 25784963 25784975 PKNOX2 JASPAR yes 53631696
chr17 25784963 25784975 TGIF1 JASPAR yes 53631697
chr17 25784963 25784975 TGIF2 JASPAR yes 53631698
chr17 25784964 25784974 MSC JASPAR yes 21211707
chr17 25784964 25784974 MSC JASPAR yes 53631699
chr17 25784968 25784976 MEIS2 JASPAR yes 21211708
chr17 25784968 25784976 MEIS3 JASPAR yes 21211709
chr17 25784968 25784976 MEIS2 JASPAR yes 53631700
chr17 25784968 25784976 MEIS3 JASPAR yes 53631701
chr17 25784969 25784973 NFE TRANSFAC yes 21211710
chr17 25784969 25784973 NFE TRANSFAC yes 53631702
chr17 25784994 25785004 EMX1 JASPAR yes 21211711
chr17 25784994 25785004 EVX1 JASPAR yes 21211712
chr17 25784994 25785004 EVX2 JASPAR yes 21211713
chr17 25784994 25785004 HOXA2 JASPAR yes 21211714
chr17 25784994 25785004 MEOX1 JASPAR yes 21211715
chr17 25784994 25785004 MEOX2 JASPAR yes 21211716
chr17 25784994 25785004 EMX1 JASPAR yes 53631703
chr17 25784994 25785004 EVX1 JASPAR yes 53631704
chr17 25784994 25785004 EVX2 JASPAR yes 53631705
chr17 25784994 25785004 HOXA2 JASPAR yes 53631706
chr17 25784994 25785004 MEOX1 JASPAR yes 53631707
chr17 25784994 25785004 MEOX2 JASPAR yes 53631708
chr17 25785010 25785014 H1TF2 TRANSFAC yes 21211717
chr17 25785010 25785014 NFE TRANSFAC yes 21211718
chr17 25785010 25785014 SRF TRANSFAC yes 21211719
chr17 25785010 25785014 H1TF2 TRANSFAC yes 53631709
chr17 25785010 25785014 NFE TRANSFAC yes 53631710
chr17 25785010 25785014 SRF TRANSFAC yes 53631711
chr17 25785015 25785023 EHF JASPAR yes 21211720
chr17 25785015 25785023 EHF JASPAR yes 53631712
chr17 25785015 25785030 TFAP2C JASPAR yes 21211721
chr17 25785015 25785030 TFAP2C JASPAR yes 53631713
chr17 25785033 25785039 SOX10 JASPAR yes 21211722
chr17 25785033 25785039 SOX10 JASPAR yes 53631714
SNP sites on vista24259[chr17:25784873-25785075]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 25784873 rs535762419 C T
POLR2A ZBTB18 ZIC3 ZIC4
4807953
chr17 25784907 rs572308678 G C
CDX1 CDX2 HOXA10 HOXA13 HOXB13 HOXD13 POLR2A ZNF263
4807954
chr17 25784975 rs190032368 A G,T
MEIS2 MEIS3 PKNOX1 PKNOX2 POLR2A TGIF1 TGIF2
4807955
Genes possibly regulated by vista24259[chr17:25784873-25785075]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 25783670 25953461 + KSR1 ENSG00000141068.9 25783670 0.82 0.99 15554 98797
Expression level of Genes
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miRNAs possibly regulated by vista24259[chr17:25784873-25785075]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results