EnhancerDB
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  3. vista24270[chr17:25856308-25856397]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24270[chr17:25856308-25856397]
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Tissue distribution of vista24270
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Transcription factor that possibly regulate vista24270[chr17:25856308-25856397]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 25856208 25856748 EP300 UCSC Txn Factor no Conserved 108245673
chr17 25856220 25856639 CEBPB UCSC Txn Factor no Conserved 108245679
chr17 25856235 25856590 STAT3 UCSC Txn Factor no Conserved 108245685
chr17 25856259 25856595 TBL1XR1 UCSC Txn Factor no Conserved 108245694
chr17 25856270 25856749 MYC UCSC Txn Factor no Conserved 108245697
chr17 25856351 25856684 JUND UCSC Txn Factor no Conserved 108245714
chr17 25856307 25856322 FOXP1 JASPAR yes 21212115
chr17 25856307 25856322 FOXP1 JASPAR yes 53641605
chr17 25856309 25856315 TBP TRANSFAC yes 21212116
chr17 25856309 25856315 TBP TRANSFAC yes 53641606
chr17 25856310 25856325 PRDM1 JASPAR yes 21212117
chr17 25856310 25856325 STAT2 JASPAR yes 21212118
chr17 25856310 25856325 PRDM1 JASPAR yes 53641607
chr17 25856310 25856325 STAT2 JASPAR yes 53641608
chr17 25856321 25856334 JUN JASPAR yes 21212119
chr17 25856321 25856334 JUN JASPAR yes 53641609
chr17 25856367 25856381 SPI1 JASPAR yes 21212120
chr17 25856367 25856381 SPIC JASPAR yes 21212121
chr17 25856367 25856381 SPI1 JASPAR yes 53641610
chr17 25856367 25856381 SPIC JASPAR yes 53641611
chr17 25856371 25856377 MZF1 JASPAR yes 21212122
chr17 25856371 25856377 MZF1 JASPAR yes 53641612
chr17 25856371 25856387 SRF JASPAR yes 21212123
chr17 25856371 25856387 SRF JASPAR yes 53641613
chr17 25856371 25856389 SRF JASPAR yes 21212124
chr17 25856371 25856389 SRF JASPAR yes 53641614
chr17 25856381 25856396 MEF2A JASPAR yes 21212125
chr17 25856381 25856396 MEF2A JASPAR yes 53641615
chr17 25856382 25856397 MEF2C JASPAR yes 21212126
chr17 25856382 25856397 MEF2C JASPAR yes 53641616
chr17 25856383 25856395 MEF2A JASPAR yes 21212127
chr17 25856383 25856395 MEF2B JASPAR yes 21212128
chr17 25856383 25856395 MEF2D JASPAR yes 21212129
chr17 25856383 25856395 MEF2A JASPAR yes 53641617
chr17 25856383 25856395 MEF2B JASPAR yes 53641618
chr17 25856383 25856395 MEF2D JASPAR yes 53641619
chr17 25856384 25856394 MEF2A JASPAR yes 21212130
chr17 25856384 25856394 MEF2A JASPAR yes 53641620
chr17 25856385 25856389 YY1 TRANSFAC yes 21212131
chr17 25856385 25856389 YY1 TRANSFAC yes 53641621
chr17 25856387 25856405 IRF2 JASPAR yes 21212132
chr17 25856387 25856405 IRF2 JASPAR yes 53641622
chr17 25856390 25856405 STAT2 JASPAR yes 21212133
chr17 25856390 25856405 STAT2 JASPAR yes 53641623
chr17 25856393 25856412 PAX5 JASPAR yes 21212134
chr17 25856393 25856412 PAX5 JASPAR yes 53641624
chr17 25856396 25856409 ELF3 JASPAR yes 21212135
chr17 25856396 25856409 ELF3 JASPAR yes 53641625
chr17 25856397 25856407 ETV6 JASPAR yes 21212136
chr17 25856397 25856407 GABPA JASPAR yes 21212137
chr17 25856397 25856407 ETV6 JASPAR yes 53641626
chr17 25856397 25856407 GABPA JASPAR yes 53641627
chr17 25856397 25856408 ELF5 JASPAR yes 21212138
chr17 25856397 25856408 ELF5 JASPAR yes 53641628
chr17 25856397 25856409 EHF JASPAR yes 21212139
chr17 25856397 25856409 ELF1 JASPAR yes 21212140
chr17 25856397 25856409 ELF4 JASPAR yes 21212141
chr17 25856397 25856409 EHF JASPAR yes 53641629
chr17 25856397 25856409 ELF1 JASPAR yes 53641630
chr17 25856397 25856409 ELF4 JASPAR yes 53641631
SNP sites on vista24270[chr17:25856308-25856397]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 25856325 rs62057793 G A
CEBPB EP300 JUN MYC PRDM1 STAT2 STAT3 TBL1XR1
4808658
chr17 25856330 rs562453120 A G
CEBPB EP300 JUN MYC STAT3 TBL1XR1
4808659
Genes possibly regulated by vista24270[chr17:25856308-25856397]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 25783670 25953461 + KSR1 ENSG00000141068.9 25783670 0.82 0.99 15554 27362
chr17 25950390 25967803 + AC015688.3 ENSG00000266728.1 25950390 0.96 0.88 15555 6007
Expression level of Genes
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miRNAs possibly regulated by vista24270[chr17:25856308-25856397]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results