EnhancerDB
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  3. vista24271[chr17:25858035-25858294]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24271[chr17:25858035-25858294]
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Tissue distribution of vista24271
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Transcription factor that possibly regulate vista24271[chr17:25858035-25858294]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 25857929 25858169 FOXA1 UCSC Txn Factor no Conserved 108245723
chr17 25858000 25858316 EBF1 UCSC Txn Factor no Conserved 108245726
chr17 25858000 25858316 EBF1 UCSC Txn Factor no Conserved 108245727
chr17 25858019 25858039 RREB1 JASPAR yes 21212142
chr17 25858019 25858039 RREB1 JASPAR yes 53641869
chr17 25858030 25858045 FOXA1 JASPAR yes 21212143
chr17 25858030 25858045 FOXA1 JASPAR yes 53641870
chr17 25858034 25858045 FOXA1 JASPAR yes 21212144
chr17 25858034 25858045 FOXA1 JASPAR yes 53641871
chr17 25858037 25858052 AR JASPAR yes 21212145
chr17 25858037 25858052 HNF4A JASPAR yes 21212146
chr17 25858037 25858052 AR JASPAR yes 53641872
chr17 25858037 25858052 HNF4A JASPAR yes 53641873
chr17 25858050 25858065 FOXP1 JASPAR yes 21212147
chr17 25858050 25858065 FOXP1 JASPAR yes 53641874
chr17 25858051 25858062 HOXC13 JASPAR yes 21212148
chr17 25858051 25858062 HOXC13 JASPAR yes 53641875
chr17 25858053 25858064 FOXP2 JASPAR yes 21212149
chr17 25858053 25858064 FOXP2 JASPAR yes 53641876
chr17 25858054 25858062 FOXO3 JASPAR yes 21212150
chr17 25858054 25858062 FOXO3 JASPAR yes 53641877
chr17 25858055 25858062 FOXD2 JASPAR yes 21212151
chr17 25858055 25858062 FOXI1 JASPAR yes 21212152
chr17 25858055 25858062 FOXL1 JASPAR yes 21212153
chr17 25858055 25858062 FOXO4 JASPAR yes 21212154
chr17 25858055 25858062 FOXO6 JASPAR yes 21212155
chr17 25858055 25858062 FOXP3 JASPAR yes 21212156
chr17 25858055 25858062 FOXD2 JASPAR yes 53641878
chr17 25858055 25858062 FOXI1 JASPAR yes 53641879
chr17 25858055 25858062 FOXL1 JASPAR yes 53641880
chr17 25858055 25858062 FOXO4 JASPAR yes 53641881
chr17 25858055 25858062 FOXO6 JASPAR yes 53641882
chr17 25858055 25858062 FOXP3 JASPAR yes 53641883
chr17 25858055 25858063 FOXD1 JASPAR yes 21212157
chr17 25858055 25858063 FOXG1 JASPAR yes 21212158
chr17 25858055 25858063 FOXO3 JASPAR yes 21212159
chr17 25858055 25858063 FOXD1 JASPAR yes 53641884
chr17 25858055 25858063 FOXG1 JASPAR yes 53641885
chr17 25858055 25858063 FOXO3 JASPAR yes 53641886
chr17 25858055 25858064 SRY JASPAR yes 21212160
chr17 25858055 25858064 SRY JASPAR yes 53641887
chr17 25858057 25858073 SOX4 JASPAR yes 21212161
chr17 25858057 25858073 SOX4 JASPAR yes 53641888
chr17 25858072 25858092 TP63 JASPAR yes 21212162
chr17 25858072 25858092 TP63 JASPAR yes 53641889
chr17 25858087 25858097 REL JASPAR yes 21212163
chr17 25858087 25858097 REL JASPAR yes 53641890
chr17 25858087 25858098 NFKB1 JASPAR yes 21212164
chr17 25858087 25858098 NFKB1 JASPAR yes 53641891
chr17 25858093 25858098 ETS2 TRANSFAC yes 21212165
chr17 25858093 25858098 ETS2 TRANSFAC yes 53641892
chr17 25858113 25858120 JUN TRANSFAC yes 21212166
chr17 25858113 25858120 JUN TRANSFAC yes 53641893
chr17 25858124 25858144 TP63 JASPAR yes 21212167
chr17 25858124 25858144 TP63 JASPAR yes 53641894
chr17 25858141 25858162 ZNF263 JASPAR yes 21212168
chr17 25858141 25858162 ZNF263 JASPAR yes 53641895
chr17 25858144 25858165 ZNF263 JASPAR yes 21212169
chr17 25858144 25858165 ZNF263 JASPAR yes 53641896
chr17 25858160 25858174 EBF1 JASPAR yes 21212170
chr17 25858160 25858174 EBF1 JASPAR yes 53641897
chr17 25858162 25858173 EBF1 JASPAR yes 21212171
chr17 25858162 25858173 EBF1 JASPAR yes 53641898
chr17 25858162 25858177 TFAP2A JASPAR yes 21212172
chr17 25858162 25858177 TFAP2A JASPAR yes 53641899
chr17 25858164 25858184 PPARG JASPAR yes 21212173
chr17 25858164 25858184 PPARG JASPAR yes 53641900
chr17 25858168 25858173 SP1 TRANSFAC yes 21212174
chr17 25858168 25858173 SP1 TRANSFAC yes 53641901
chr17 25858173 25858191 RARA JASPAR yes 21212175
chr17 25858173 25858191 RARA JASPAR yes 53641902
chr17 25858192 25858206 STAT1 JASPAR yes 21212176
chr17 25858192 25858206 STAT1 JASPAR yes 53641903
chr17 25858221 25858231 OLIG2 JASPAR yes 21212177
chr17 25858221 25858231 OLIG3 JASPAR yes 21212178
chr17 25858221 25858231 OLIG2 JASPAR yes 53641904
chr17 25858221 25858231 OLIG3 JASPAR yes 53641905
chr17 25858237 25858251 STAT1 JASPAR yes 21212179
chr17 25858237 25858251 STAT1 JASPAR yes 53641906
chr17 25858238 25858252 SPI1 JASPAR yes 21212180
chr17 25858238 25858252 SPIC JASPAR yes 21212181
chr17 25858238 25858252 SPI1 JASPAR yes 53641907
chr17 25858238 25858252 SPIC JASPAR yes 53641908
chr17 25858241 25858246 ETS2 TRANSFAC yes 21212182
chr17 25858241 25858246 ETS2 TRANSFAC yes 53641909
chr17 25858244 25858259 STAT1 JASPAR yes 21212183
chr17 25858244 25858259 STAT1 JASPAR yes 53641910
chr17 25858246 25858257 STAT3 JASPAR yes 21212184
chr17 25858246 25858257 STAT3 JASPAR yes 53641911
chr17 25858292 25858298 SOX10 JASPAR yes 21212185
chr17 25858292 25858298 SOX10 JASPAR yes 53641912
SNP sites on vista24271[chr17:25858035-25858294]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 25858067 rs1010026 C T
EBF1 FOXA1 SOX4
4808671
chr17 25858194 rs115091941 G A
EBF1 STAT1
4808672
Genes possibly regulated by vista24271[chr17:25858035-25858294]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 25783670 25953461 + KSR1 ENSG00000141068.9 25783670 0.82 0.99 15554 25635
chr17 25950390 25967803 + AC015688.3 ENSG00000266728.1 25950390 0.96 0.88 15555 7904
chr17 25956824 25976586 + LGALS9 ENSG00000168961.12 25956824 0.83 1.0 15556 1470
Expression level of Genes
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miRNAs possibly regulated by vista24271[chr17:25858035-25858294]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results