EnhancerDB
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  3. vista24284[chr17:26307415-26307616]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24284[chr17:26307415-26307616]
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Tissue distribution of vista24284
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Transcription factor that possibly regulate vista24284[chr17:26307415-26307616]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 26307099 26307439 JUN UCSC Txn Factor no Conserved 108245918
chr17 26307159 26307432 FOS UCSC Txn Factor no Conserved 108245926
chr17 26307429 26307437 FOXL1 JASPAR yes 21212869
chr17 26307429 26307437 FOXL1 JASPAR yes 53663298
chr17 26307435 26307438 MYB TRANSFAC yes 21212870
chr17 26307435 26307438 MYB TRANSFAC yes 53663299
chr17 26307475 26307493 SRF JASPAR yes 21212871
chr17 26307475 26307493 SRF JASPAR yes 53663300
chr17 26307477 26307493 SRF JASPAR yes 21212872
chr17 26307477 26307493 SRF JASPAR yes 53663301
chr17 26307477 26307495 SRF JASPAR yes 21212873
chr17 26307477 26307495 SRF JASPAR yes 53663302
chr17 26307480 26307492 SRF JASPAR yes 21212874
chr17 26307480 26307492 SRF JASPAR yes 53663303
chr17 26307515 26307529 TCF7L2 JASPAR yes 21212875
chr17 26307515 26307529 TCF7L2 JASPAR yes 53663304
chr17 26307519 26307525 TCF1 TRANSFAC yes 21212876
chr17 26307519 26307525 TCF1 TRANSFAC yes 53663305
chr17 26307536 26307542 ZNF354C JASPAR yes 21212877
chr17 26307536 26307542 ZNF354C JASPAR yes 53663306
chr17 26307548 26307562 SPIC JASPAR yes 21212878
chr17 26307548 26307562 SPIC JASPAR yes 53663307
chr17 26307560 26307575 SOX21 JASPAR yes 21212879
chr17 26307560 26307575 SOX21 JASPAR yes 53663308
chr17 26307571 26307586 FOXA1 JASPAR yes 21212880
chr17 26307571 26307586 FOXA1 JASPAR yes 53663309
chr17 26307575 26307579 YY1 TRANSFAC yes 21212881
chr17 26307575 26307579 YY1 TRANSFAC yes 53663310
chr17 26307575 26307586 FOXA1 JASPAR yes 21212882
chr17 26307575 26307586 FOXA1 JASPAR yes 53663311
chr17 26307582 26307593 FOXB1 JASPAR yes 21212883
chr17 26307582 26307593 FOXB1 JASPAR yes 53663312
chr17 26307586 26307593 NKX3-1 JASPAR yes 21212884
chr17 26307586 26307593 NKX3-1 JASPAR yes 53663313
chr17 26307591 26307595 TEAD2 TRANSFAC yes 21212885
chr17 26307591 26307595 TEAD2 TRANSFAC yes 53663314
chr17 26307593 26307596 MYB TRANSFAC yes 21212886
chr17 26307593 26307596 MYB TRANSFAC yes 53663315
chr17 26307615 26307627 NHLH1 JASPAR yes 21212887
chr17 26307615 26307627 NHLH1 JASPAR yes 53663316
chr17 26307616 26307626 NHLH1 JASPAR yes 21212888
chr17 26307616 26307626 NHLH1 JASPAR yes 53663317
SNP sites on vista24284[chr17:26307415-26307616]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 26307430 rs12948818 T C
FOS FOXL1 JUN
4810420
chr17 26307615 rs113682333 C CAT
NHLH1
4810421
Genes possibly regulated by vista24284[chr17:26307415-26307616]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 26125832 26220391 - RP1-66C13.4 ENSG00000266202.1 26220391 0.97 0.0 15558 12976
chr17 26205340 26221778 - LYRM9 ENSG00000232859.5 26221778 0.72 1.0 15559 14363
chr17 26368763 26523407 + NLK ENSG00000087095.8 26368763 0.79 0.98 15560 38853
Expression level of Genes
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miRNAs possibly regulated by vista24284[chr17:26307415-26307616]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results