EnhancerDB
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  3. vista24288[chr17:26368091-26368384]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24288[chr17:26368091-26368384]
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Tissue distribution of vista24288
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Transcription factor that possibly regulate vista24288[chr17:26368091-26368384]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 26368147 26368822 NFYB UCSC Txn Factor no Conserved 108245958
chr17 26368185 26368826 NFYA UCSC Txn Factor no Conserved 108245961
chr17 26368190 26368842 SP1 UCSC Txn Factor no Conserved 108245963
chr17 26368238 26368831 SP2 UCSC Txn Factor no Conserved 108245970
chr17 26368243 26368922 GABPA UCSC Txn Factor no Conserved 108245972
chr17 26368258 26369167 POLR2A UCSC Txn Factor no Conserved 108245974
chr17 26368381 26368709 TCF12 UCSC Txn Factor no Conserved 108245981
chr17 26368127 26368145 ESR1 JASPAR yes 21213050
chr17 26368129 26368133 H4TF2 TRANSFAC yes 21213051
chr17 26368133 26368138 SP1 TRANSFAC yes 21213052
chr17 26368147 26368157 SP1 JASPAR yes 21213053
chr17 26368165 26368174 SP1 TRANSFAC yes 21213054
chr17 26368166 26368172 SP1 TRANSFAC yes 21213055
chr17 26368166 26368176 SP1 JASPAR yes 21213056
chr17 26368167 26368174 SP1 TRANSFAC yes 21213057
chr17 26368168 26368173 SP1 TRANSFAC yes 21213058
chr17 26368168 26368174 SP1 TRANSFAC yes 21213059
chr17 26368184 26368197 ZBED1 JASPAR yes 21213060
chr17 26368191 26368209 MAFF JASPAR yes 21213061
chr17 26368194 26368202 MEIS2 JASPAR yes 21213062
chr17 26368194 26368202 MEIS3 JASPAR yes 21213063
chr17 26368217 26368221 NFE TRANSFAC yes 21213064
chr17 26368239 26368244 SP1 TRANSFAC yes 21213065
chr17 26368244 26368255 NFIL3 JASPAR yes 21213066
chr17 26368257 26368272 FOXP1 JASPAR yes 21213067
chr17 26368261 26368271 NFATC3 JASPAR yes 21213068
chr17 26368262 26368269 NFATC2 JASPAR yes 21213069
chr17 26368267 26368271 YY1 TRANSFAC yes 21213070
chr17 26368268 26368283 FOXP1 JASPAR yes 21213071
chr17 26368269 26368280 FOXP2 JASPAR yes 21213072
chr17 26368269 26368281 FOXC2 JASPAR yes 21213073
chr17 26368277 26368286 NKX2-8 JASPAR yes 21213074
chr17 26368277 26368287 NKX2-3 JASPAR yes 21213075
chr17 26368287 26368291 YY1 TRANSFAC yes 21213076
chr17 26368313 26368317 YY1 TRANSFAC yes 21213077
chr17 26368328 26368333 NFY TRANSFAC yes 21213078
chr17 26368344 26368350 SOX10 JASPAR yes 21213079
chr17 26368353 26368371 NFYA JASPAR yes 21213080
chr17 26368356 26368372 NFYA JASPAR yes 21213081
chr17 26368359 26368374 NFYB JASPAR yes 21213082
chr17 26368361 26368366 NFY TRANSFAC yes 21213083
chr17 26368377 26368382 SP1 TRANSFAC yes 21213084
chr17 26368377 26368383 SP1 TRANSFAC yes 21213085
SNP sites on vista24288[chr17:26368091-26368384]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 26368193 rs547482587 A C
MAFF NFYA NFYB SP1 ZBED1
4810798
chr17 26368235 rs35667337 T C
NFYA NFYB SP1
4810799
chr17 26368257 rs34690763 C T
FOXP1 GABPA NFYA NFYB SP1 SP2
4810800
chr17 26368320 rs186757874 C T
GABPA NFYA NFYB POLR2A SP1 SP2
4810801
Genes possibly regulated by vista24288[chr17:26368091-26368384]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 26368763 26523407 + NLK ENSG00000087095.8 26368763 0.79 0.98 15560 99621
Expression level of Genes
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miRNAs possibly regulated by vista24288[chr17:26368091-26368384]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results