EnhancerDB
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  3. vista24292[chr17:26578258-26578420]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24292[chr17:26578258-26578420]
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Tissue distribution of vista24292
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Transcription factor that possibly regulate vista24292[chr17:26578258-26578420]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 26578115 26578519 CTCF UCSC Txn Factor no Conserved 108245986
chr17 26578197 26578459 RAD21 UCSC Txn Factor no Conserved 108245998
chr17 26578226 26578967 E2F6 UCSC Txn Factor no Conserved 108246008
chr17 26578226 26578967 E2F6 UCSC Txn Factor no Conserved 108246009
chr17 26578271 26578811 USF1 UCSC Txn Factor no Conserved 108246020
chr17 26578271 26578811 USF1 UCSC Txn Factor no Conserved 108246021
chr17 26578280 26578590 BHLHE40 UCSC Txn Factor no Conserved 108246022
chr17 26578292 26578571 USF2 UCSC Txn Factor no Conserved 108246028
chr17 26578289 26578299 ID4 JASPAR yes 21213230
chr17 26578289 26578299 TCF3 JASPAR yes 21213231
chr17 26578289 26578299 TCF4 JASPAR yes 21213232
chr17 26578289 26578299 ID4 JASPAR yes 53684006
chr17 26578289 26578299 TCF3 JASPAR yes 53684007
chr17 26578289 26578299 TCF4 JASPAR yes 53684008
chr17 26578290 26578299 SNAI2 JASPAR yes 21213233
chr17 26578290 26578299 SNAI2 JASPAR yes 53684009
chr17 26578291 26578296 USF2 TRANSFAC yes 21213234
chr17 26578291 26578296 USF2 TRANSFAC yes 53684010
chr17 26578296 26578315 REST JASPAR yes 21213235
chr17 26578296 26578315 REST JASPAR yes 53684011
chr17 26578306 26578315 TFAP2A JASPAR yes 21213236
chr17 26578306 26578315 TFAP2A JASPAR yes 53684012
chr17 26578311 26578330 CTCF JASPAR yes 21213237
chr17 26578311 26578330 CTCF JASPAR yes 53684013
chr17 26578314 26578326 TFAP2A JASPAR yes 21213238
chr17 26578314 26578326 TFAP2A JASPAR yes 53684014
chr17 26578392 26578402 SP1 JASPAR yes 21213239
chr17 26578392 26578402 SP1 JASPAR yes 53684015
chr17 26578394 26578398 LFA1 TRANSFAC yes 21213240
chr17 26578394 26578398 LFA1 TRANSFAC yes 53684016
chr17 26578398 26578404 SP1 TRANSFAC yes 21213241
chr17 26578398 26578404 SP1 TRANSFAC yes 53684017
chr17 26578399 26578404 SP1 TRANSFAC yes 21213242
chr17 26578399 26578404 SP1 TRANSFAC yes 53684018
chr17 26578408 26578423 ZIC4 JASPAR yes 21213243
chr17 26578408 26578423 ZIC4 JASPAR yes 53684019
chr17 26578408 26578424 GLIS1 JASPAR yes 21213244
chr17 26578408 26578424 GLIS1 JASPAR yes 53684020
chr17 26578409 26578420 TFAP2A JASPAR yes 21213245
chr17 26578409 26578420 TFAP2B JASPAR yes 21213246
chr17 26578409 26578420 TFAP2C JASPAR yes 21213247
chr17 26578409 26578420 TFAP2A JASPAR yes 53684021
chr17 26578409 26578420 TFAP2B JASPAR yes 53684022
chr17 26578409 26578420 TFAP2C JASPAR yes 53684023
chr17 26578409 26578423 ZIC1 JASPAR yes 21213248
chr17 26578409 26578423 ZIC1 JASPAR yes 53684024
chr17 26578410 26578419 TFAP2A JASPAR yes 21213249
chr17 26578410 26578419 TFAP2A JASPAR yes 53684025
chr17 26578415 26578420 SP1 TRANSFAC yes 21213250
chr17 26578415 26578420 SP1 TRANSFAC yes 53684026
chr17 26578418 26578432 CREB3 JASPAR yes 21213251
chr17 26578418 26578432 CREB3 JASPAR yes 53684027
chr17 26578419 26578423 ESR1 TRANSFAC yes 21213252
chr17 26578419 26578423 ESR1 TRANSFAC yes 53684028
chr17 26578419 26578429 MAX JASPAR yes 21213253
chr17 26578419 26578429 MAX JASPAR yes 53684029
chr17 26578419 26578430 USF1 JASPAR yes 21213254
chr17 26578419 26578430 USF2 JASPAR yes 21213255
chr17 26578419 26578430 USF1 JASPAR yes 53684030
chr17 26578419 26578430 USF2 JASPAR yes 53684031
chr17 26578420 26578430 BHLHE40 JASPAR yes 21213256
chr17 26578420 26578430 BHLHE41 JASPAR yes 21213257
chr17 26578420 26578430 MLXIPL JASPAR yes 21213258
chr17 26578420 26578430 MLX JASPAR yes 21213259
chr17 26578420 26578430 SREBF2 JASPAR yes 21213260
chr17 26578420 26578430 TFE3 JASPAR yes 21213261
chr17 26578420 26578430 TFEB JASPAR yes 21213262
chr17 26578420 26578430 TFEC JASPAR yes 21213263
chr17 26578420 26578430 BHLHE40 JASPAR yes 53684032
chr17 26578420 26578430 BHLHE41 JASPAR yes 53684033
chr17 26578420 26578430 MLXIPL JASPAR yes 53684034
chr17 26578420 26578430 MLX JASPAR yes 53684035
chr17 26578420 26578430 SREBF2 JASPAR yes 53684036
chr17 26578420 26578430 TFE3 JASPAR yes 53684037
chr17 26578420 26578430 TFEB JASPAR yes 53684038
chr17 26578420 26578430 TFEC JASPAR yes 53684039
chr17 26578420 26578431 USF1 JASPAR yes 21213264
chr17 26578420 26578431 USF2 JASPAR yes 21213265
chr17 26578420 26578431 USF1 JASPAR yes 53684040
chr17 26578420 26578431 USF2 JASPAR yes 53684041
SNP sites on vista24292[chr17:26578258-26578420]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 26578270 rs533804637 T G
CTCF E2F6 RAD21
4811764
chr17 26578310 rs558333005 C T
BHLHE40 CTCF E2F6 RAD21 REST TFAP2A USF1 USF2
4811765
Genes possibly regulated by vista24292[chr17:26578258-26578420]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 26638667 26642323 + AC061975.10 ENSG00000268206.1 26638667 0.0 0.0 15561 39753
chr17 26646121 26655707 + TMEM97 ENSG00000109084.9 26646121 0.82 0.99 15562 32299
chr17 26655352 26662515 - IFT20 ENSG00000109083.9 26662515 0.68 0.99 15563 15905
chr17 26662628 26674035 + TNFAIP1 ENSG00000109079.5 26662628 0.65 1.0 15564 15792
Expression level of Genes
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miRNAs possibly regulated by vista24292[chr17:26578258-26578420]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results