EnhancerDB
  1. Home
  2. Enhancers
  3. vista24293[chr17:26578773-26579067]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24293[chr17:26578773-26579067]
Back to top
Tissue distribution of vista24293
Back to top
Transcription factor that possibly regulate vista24293[chr17:26578773-26579067]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 26578226 26578967 E2F6 UCSC Txn Factor no Conserved 108246008
chr17 26578226 26578967 E2F6 UCSC Txn Factor no Conserved 108246009
chr17 26578271 26578811 USF1 UCSC Txn Factor no Conserved 108246020
chr17 26578271 26578811 USF1 UCSC Txn Factor no Conserved 108246021
chr17 26578648 26579036 CTCF UCSC Txn Factor no Conserved 108246051
chr17 26578682 26578946 RAD21 UCSC Txn Factor no Conserved 108246058
chr17 26578770 26578783 SMAD2 JASPAR yes 21213266
chr17 26578770 26578783 SMAD2 JASPAR yes 53684088
chr17 26578774 26578792 ESR2 JASPAR yes 21213267
chr17 26578774 26578792 ESR2 JASPAR yes 53684089
chr17 26578776 26578796 ESR1 JASPAR yes 21213268
chr17 26578776 26578796 ESR1 JASPAR yes 53684090
chr17 26578833 26578837 NFE TRANSFAC yes 21213269
chr17 26578833 26578837 NFE TRANSFAC yes 53684091
chr17 26578834 26578853 CTCF JASPAR yes 21213270
chr17 26578834 26578853 CTCF JASPAR yes 53684092
chr17 26578839 26578852 TFAP2A JASPAR yes 21213271
chr17 26578839 26578852 TFAP2B JASPAR yes 21213272
chr17 26578839 26578852 TFAP2C JASPAR yes 21213273
chr17 26578839 26578852 TFAP2A JASPAR yes 53684093
chr17 26578839 26578852 TFAP2B JASPAR yes 53684094
chr17 26578839 26578852 TFAP2C JASPAR yes 53684095
chr17 26578839 26578854 TFAP2C JASPAR yes 21213274
chr17 26578839 26578854 TFAP2C JASPAR yes 53684096
chr17 26578840 26578851 EBF1 JASPAR yes 21213275
chr17 26578840 26578851 EBF1 JASPAR yes 53684097
chr17 26578840 26578852 TFAP2A JASPAR yes 21213276
chr17 26578840 26578852 TFAP2B JASPAR yes 21213277
chr17 26578840 26578852 TFAP2C JASPAR yes 21213278
chr17 26578840 26578852 TFAP2A JASPAR yes 53684098
chr17 26578840 26578852 TFAP2B JASPAR yes 53684099
chr17 26578840 26578852 TFAP2C JASPAR yes 53684100
chr17 26578850 26578854 YY1 TRANSFAC yes 21213279
chr17 26578850 26578854 YY1 TRANSFAC yes 53684101
chr17 26578862 26578868 ZNF354C JASPAR yes 21213280
chr17 26578862 26578868 ZNF354C JASPAR yes 53684102
chr17 26578883 26578888 GATA2 JASPAR yes 21213281
chr17 26578883 26578888 GATA2 JASPAR yes 53684103
chr17 26578931 26578943 PKNOX1 JASPAR yes 21213282
chr17 26578931 26578943 TGIF1 JASPAR yes 21213283
chr17 26578931 26578943 TGIF2 JASPAR yes 21213284
chr17 26578931 26578943 PKNOX1 JASPAR yes 53684104
chr17 26578931 26578943 TGIF1 JASPAR yes 53684105
chr17 26578931 26578943 TGIF2 JASPAR yes 53684106
chr17 26578940 26578961 LUN1 TRANSFAC yes 21213285
chr17 26578940 26578961 LUN1 TRANSFAC yes 53684107
chr17 26578957 26578971 PLAG1 JASPAR yes 21213286
chr17 26578957 26578971 PLAG1 JASPAR yes 53684108
chr17 26578964 26578969 SP1 TRANSFAC yes 21213287
chr17 26578964 26578969 SP1 TRANSFAC yes 53684109
chr17 26578965 26578970 SP1 TRANSFAC yes 21213288
chr17 26578965 26578970 SP1 TRANSFAC yes 53684110
chr17 26578968 26578973 SP1 TRANSFAC yes 21213289
chr17 26578968 26578973 SP1 TRANSFAC yes 53684111
chr17 26579003 26579012 THAP1 JASPAR yes 21213290
chr17 26579003 26579012 THAP1 JASPAR yes 53684112
chr17 26579006 26579010 LFA1 TRANSFAC yes 21213291
chr17 26579006 26579010 LFA1 TRANSFAC yes 53684113
chr17 26579012 26579032 ESR1 JASPAR yes 21213292
chr17 26579012 26579032 ESR1 JASPAR yes 53684114
chr17 26579024 26579042 MAFF JASPAR yes 21213293
chr17 26579024 26579042 MAFF JASPAR yes 53684115
chr17 26579025 26579029 NFE TRANSFAC yes 21213294
chr17 26579025 26579029 NFE TRANSFAC yes 53684116
chr17 26579039 26579045 TBP TRANSFAC yes 21213295
chr17 26579039 26579045 TBP TRANSFAC yes 53684117
chr17 26579040 26579054 ONECUT3 JASPAR yes 21213296
chr17 26579040 26579054 ONECUT3 JASPAR yes 53684118
chr17 26579052 26579058 TBP TRANSFAC yes 21213297
chr17 26579052 26579058 TBP TRANSFAC yes 53684119
chr17 26579055 26579070 STAT2 JASPAR yes 21213298
chr17 26579055 26579070 STAT2 JASPAR yes 53684120
SNP sites on vista24293[chr17:26578773-26579067]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 26578914 rs532618980 C G
CTCF E2F6 RAD21
4811770
Genes possibly regulated by vista24293[chr17:26578773-26579067]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 26638667 26642323 + AC061975.10 ENSG00000268206.1 26638667 0.0 0.0 15561 40400
chr17 26646121 26655707 + TMEM97 ENSG00000109084.9 26646121 0.82 0.99 15562 32946
chr17 26655352 26662515 - IFT20 ENSG00000109083.9 26662515 0.68 0.99 15563 16552
chr17 26662628 26674035 + TNFAIP1 ENSG00000109079.5 26662628 0.65 1.0 15564 16439
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24293[chr17:26578773-26579067]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results