EnhancerDB
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  3. vista24299[chr17:26827709-26827953]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24299[chr17:26827709-26827953]
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Tissue distribution of vista24299
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Transcription factor that possibly regulate vista24299[chr17:26827709-26827953]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 26827900 26828538 RELA UCSC Txn Factor no Conserved 108246104
chr17 26827900 26828538 RELA UCSC Txn Factor no Conserved 108246105
chr17 26827721 26827736 RUNX2 JASPAR yes 21213529
chr17 26827730 26827740 FIGLA JASPAR yes 21213530
chr17 26827731 26827740 SNAI2 JASPAR yes 21213531
chr17 26827732 26827737 USF2 TRANSFAC yes 21213532
chr17 26827778 26827793 AR JASPAR yes 21213533
chr17 26827805 26827815 GCM2 JASPAR yes 21213534
chr17 26827811 26827815 YY1 TRANSFAC yes 21213535
chr17 26827826 26827846 TP53 JASPAR yes 21213536
chr17 26827851 26827855 YY1 TRANSFAC yes 21213537
chr17 26827875 26827891 RFX3 JASPAR yes 21213538
chr17 26827875 26827891 RFX4 JASPAR yes 21213539
chr17 26827886 26827896 MAX JASPAR yes 21213540
chr17 26827887 26827897 BHLHE40 JASPAR yes 21213541
chr17 26827887 26827897 HEY1 JASPAR yes 21213542
chr17 26827887 26827897 MLXIPL JASPAR yes 21213543
chr17 26827887 26827897 MLX JASPAR yes 21213544
chr17 26827889 26827894 MYC TRANSFAC yes 21213545
chr17 26827889 26827894 USF1 TRANSFAC yes 21213546
chr17 26827889 26827894 USF2 TRANSFAC yes 21213547
chr17 26827889 26827910 IRF1 JASPAR yes 21213548
chr17 26827895 26827905 TBX21 JASPAR yes 21213549
chr17 26827895 26827908 EOMES JASPAR yes 21213550
chr17 26827908 26827919 FOXA1 JASPAR yes 21213551
chr17 26827908 26827920 POU3F1 JASPAR yes 21213552
chr17 26827908 26827921 POU2F2 JASPAR yes 21213553
chr17 26827908 26827923 FOXA1 JASPAR yes 21213554
chr17 26827909 26827918 POU3F4 JASPAR yes 21213555
chr17 26827909 26827918 POU5F1B JASPAR yes 21213556
chr17 26827909 26827920 FOXB1 JASPAR yes 21213557
chr17 26827909 26827920 FOXC1 JASPAR yes 21213558
chr17 26827946 26827953 NKX3-1 JASPAR yes 21213559
SNP sites on vista24299[chr17:26827709-26827953]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 26827711 rs12103672 C T no 4812500
chr17 26827772 rs538301309 C T no 4812501
chr17 26827773 rs77920659 G A no 4812502
chr17 26827798 rs574954168 C A no 4812503
chr17 26827838 rs8078229 C T
TP53
4812504
chr17 26827893 rs140868361 G A
BHLHE40 HEY1 IRF1 MAX MLX MLXIPL MYC USF1 USF2
4812505
Genes possibly regulated by vista24299[chr17:26827709-26827953]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 26721661 26734215 - SLC46A1 ENSG00000076351.8 26734215 0.78 1.0 15570 6506
chr17 26800311 26824799 + SLC13A2 ENSG00000007216.10 26800311 0.99 1.0 15572 72602
chr17 26833261 26865914 + FOXN1 ENSG00000109101.3 26833261 0.99 0.99 15573 94692
chr17 26873725 26879686 - UNC119 ENSG00000109103.7 26879686 0.75 1.0 15574 48267
chr17 26880401 26898890 - PIGS ENSG00000087111.16 26898890 0.73 1.0 15575 29063
chr17 26900133 26904282 - ALDOC ENSG00000109107.9 26904282 0.88 1.0 15576 23671
chr17 26904588 26926297 - SPAG5 ENSG00000076382.12 26926297 0.92 1.0 15577 1656
Expression level of Genes
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miRNAs possibly regulated by vista24299[chr17:26827709-26827953]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results