EnhancerDB
  1. Home
  2. Enhancers
  3. vista24304[chr17:27072804-27073286]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24304[chr17:27072804-27073286]
Back to top
Tissue distribution of vista24304
Back to top
Transcription factor that possibly regulate vista24304[chr17:27072804-27073286]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 27069870 27079874 POLR2A UCSC Txn Factor no Conserved 108246142
chr17 27072740 27073060 MAFK UCSC Txn Factor no Conserved 108246149
chr17 27072760 27073040 MAFF UCSC Txn Factor no Conserved 108246154
chr17 27073089 27073433 STAT3 UCSC Txn Factor no Conserved 108246171
chr17 27073179 27073332 TFAP2C UCSC Txn Factor no Conserved 108246176
chr17 27072822 27072836 TLX1 JASPAR yes 21213845
chr17 27072850 27072865 TFAP2A JASPAR yes 21213846
chr17 27072852 27072867 TFAP2C JASPAR yes 21213847
chr17 27072853 27072864 TFAP2A JASPAR yes 21213848
chr17 27072877 27072881 NFE TRANSFAC yes 21213849
chr17 27072881 27072887 SP1 TRANSFAC yes 21213850
chr17 27072897 27072918 MAFG JASPAR yes 21213851
chr17 27072902 27072920 MAFF JASPAR yes 21213852
chr17 27072903 27072918 MAFK JASPAR yes 21213853
chr17 27072907 27072918 NRL JASPAR yes 21213854
chr17 27072912 27072922 TEAD1 JASPAR yes 21213855
chr17 27072912 27072922 TEAD4 JASPAR yes 21213856
chr17 27072912 27072924 TEAD1 JASPAR yes 21213857
chr17 27072913 27072921 TEAD3 JASPAR yes 21213858
chr17 27072937 27072947 SP1 JASPAR yes 21213859
chr17 27072938 27072944 SP1 TRANSFAC yes 21213860
chr17 27072938 27072948 SP1 JASPAR yes 21213861
chr17 27072938 27072953 ZIC3 JASPAR yes 21213862
chr17 27072939 27072954 TFAP2C JASPAR yes 21213863
chr17 27072942 27072953 EBF1 JASPAR yes 21213864
chr17 27072942 27072956 PLAG1 JASPAR yes 21213865
chr17 27072943 27072957 PLAG1 JASPAR yes 21213866
chr17 27072964 27072970 MZF1 JASPAR yes 21213867
chr17 27072995 27073002 ETS1 TRANSFAC yes 21213868
chr17 27072996 27073004 EHF JASPAR yes 21213869
chr17 27073000 27073015 ESR2 JASPAR yes 21213870
chr17 27073000 27073020 ESR1 JASPAR yes 21213871
chr17 27073007 27073022 TFAP2A JASPAR yes 21213872
chr17 27073009 27073022 TFAP2A JASPAR yes 21213873
chr17 27073009 27073022 TFAP2B JASPAR yes 21213874
chr17 27073009 27073022 TFAP2C JASPAR yes 21213875
chr17 27073014 27073023 THAP1 JASPAR yes 21213876
chr17 27073017 27073021 LFA1 TRANSFAC yes 21213877
chr17 27073035 27073050 RUNX2 JASPAR yes 21213878
chr17 27073047 27073068 REST JASPAR yes 21213879
chr17 27073050 27073061 ESRRA JASPAR yes 21213880
chr17 27073050 27073061 ESRRB JASPAR yes 21213881
chr17 27073056 27073075 PAX5 JASPAR yes 21213882
chr17 27073057 27073063 NFIC JASPAR yes 21213883
chr17 27073059 27073076 PAX1 JASPAR yes 21213884
chr17 27073059 27073076 PAX9 JASPAR yes 21213885
chr17 27073062 27073067 MYB TRANSFAC yes 21213886
chr17 27073084 27073099 LEF1 JASPAR yes 21213887
chr17 27073085 27073093 RHOXF1 JASPAR yes 21213888
chr17 27073086 27073107 ZNF263 JASPAR yes 21213889
chr17 27073095 27073116 ZNF263 JASPAR yes 21213890
chr17 27073101 27073106 SP1 TRANSFAC yes 21213891
chr17 27073115 27073130 TFAP2A JASPAR yes 21213892
chr17 27073122 27073126 LFA1 TRANSFAC yes 21213893
chr17 27073125 27073130 MYC TRANSFAC yes 21213894
chr17 27073131 27073135 LFA1 TRANSFAC yes 21213895
chr17 27073147 27073151 H4TF2 TRANSFAC yes 21213896
chr17 27073225 27073236 FOS JASPAR yes 21213897
chr17 27073225 27073236 FOSL1 JASPAR yes 21213898
chr17 27073225 27073236 JUND JASPAR yes 21213899
chr17 27073226 27073240 JUN JASPAR yes 21213900
chr17 27073227 27073238 BATF JASPAR yes 21213901
chr17 27073237 27073248 STAT1 JASPAR yes 21213902
chr17 27073237 27073248 STAT3 JASPAR yes 21213903
chr17 27073239 27073251 TEAD1 JASPAR yes 21213904
chr17 27073242 27073250 TEAD3 JASPAR yes 21213905
chr17 27073248 27073257 SP1 TRANSFAC yes 21213906
chr17 27073249 27073264 TFAP2A JASPAR yes 21213907
chr17 27073249 27073264 TFAP2C JASPAR yes 21213908
chr17 27073251 27073257 NFE2 TRANSFAC yes 21213909
chr17 27073252 27073264 TFAP2A JASPAR yes 21213910
chr17 27073252 27073264 TFAP2B JASPAR yes 21213911
chr17 27073252 27073264 TFAP2C JASPAR yes 21213912
chr17 27073252 27073267 TFAP2A JASPAR yes 21213913
chr17 27073253 27073262 TFAP2A JASPAR yes 21213914
chr17 27073254 27073263 TFAP2A JASPAR yes 21213915
SNP sites on vista24304[chr17:27072804-27073286]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 27072847 rs532731447 A G
MAFF MAFK POLR2A
4813045
chr17 27073132 rs529696224 G A
LFA1 POLR2A STAT3
4813046
chr17 27073248 rs533610910 T C
POLR2A SP1 STAT1 STAT3 TEAD1 TEAD3 TFAP2C
4813047
chr17 27073273 rs545576473 T TGCTGGGTGAGCCATTGC
POLR2A STAT3 TFAP2C
4813048
Genes possibly regulated by vista24304[chr17:27072804-27073286]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 26975374 26989207 - SDF2 ENSG00000132581.5 26989207 0.63 1.0 15580 16403
chr17 26989109 27029697 + SUPT6H ENSG00000109111.10 26989109 0.61 1.0 15581 16305
chr17 27030215 27038872 - PROCA1 ENSG00000167525.9 27038872 0.79 0.98 15582 66068
chr17 27041299 27045447 - RAB34 ENSG00000109113.13 27045447 0.72 0.96 15583 72643
chr17 27046411 27051377 + RPL23A ENSG00000198242.9 27046411 0.83 1.0 15584 73607
chr17 27051366 27054953 - TLCD1 ENSG00000160606.6 27054953 0.83 1.0 15585 82149
chr17 27052915 27070473 + NEK8 ENSG00000160602.9 27052915 0.79 1.0 15586 80111
chr17 27071002 27077974 + TRAF4 ENSG00000076604.10 27071002 0.83 1.0 15587 98198
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24304[chr17:27072804-27073286]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results