EnhancerDB
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  3. vista24310[chr17:27129097-27129445]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24310[chr17:27129097-27129445]
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Tissue distribution of vista24310
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Transcription factor that possibly regulate vista24310[chr17:27129097-27129445]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 27129092 27129101 NKX3-2 JASPAR yes 21214094
chr17 27129092 27129101 NKX3-2 JASPAR yes 53696272
chr17 27129092 27129102 NKX2-3 JASPAR yes 21214095
chr17 27129092 27129102 NKX2-3 JASPAR yes 53696273
chr17 27129093 27129101 ISL2 JASPAR yes 21214096
chr17 27129093 27129101 ISL2 JASPAR yes 53696274
chr17 27129093 27129102 NKX2-8 JASPAR yes 21214097
chr17 27129093 27129102 NKX2-8 JASPAR yes 53696275
chr17 27129117 27129132 STAT1 JASPAR yes 21214098
chr17 27129117 27129132 STAT1 JASPAR yes 53696276
chr17 27129119 27129130 STAT1 JASPAR yes 21214099
chr17 27129119 27129130 STAT3 JASPAR yes 21214100
chr17 27129119 27129130 STAT1 JASPAR yes 53696277
chr17 27129119 27129130 STAT3 JASPAR yes 53696278
chr17 27129146 27129156 ID4 JASPAR yes 21214101
chr17 27129146 27129156 TCF3 JASPAR yes 21214102
chr17 27129146 27129156 TCF4 JASPAR yes 21214103
chr17 27129146 27129156 ID4 JASPAR yes 53696279
chr17 27129146 27129156 TCF3 JASPAR yes 53696280
chr17 27129146 27129156 TCF4 JASPAR yes 53696281
chr17 27129156 27129166 SREBF1 JASPAR yes 21214104
chr17 27129156 27129166 SREBF2 JASPAR yes 21214105
chr17 27129156 27129166 TBX21 JASPAR yes 21214106
chr17 27129156 27129166 SREBF1 JASPAR yes 53696282
chr17 27129156 27129166 SREBF2 JASPAR yes 53696283
chr17 27129156 27129166 TBX21 JASPAR yes 53696284
chr17 27129157 27129165 MGA JASPAR yes 21214107
chr17 27129157 27129165 MGA JASPAR yes 53696285
chr17 27129258 27129271 SMAD2 JASPAR yes 21214108
chr17 27129258 27129271 SMAD2 JASPAR yes 53696286
chr17 27129268 27129284 GLIS1 JASPAR yes 21214109
chr17 27129268 27129284 GLIS1 JASPAR yes 53696287
chr17 27129276 27129284 HOXA5 JASPAR yes 21214110
chr17 27129276 27129284 HOXA5 JASPAR yes 53696288
chr17 27129284 27129299 MEF2A JASPAR yes 21214111
chr17 27129284 27129299 MEF2A JASPAR yes 53696289
chr17 27129285 27129300 MEF2C JASPAR yes 21214112
chr17 27129285 27129300 MEF2C JASPAR yes 53696290
chr17 27129286 27129298 MEF2A JASPAR yes 21214113
chr17 27129286 27129298 MEF2B JASPAR yes 21214114
chr17 27129286 27129298 MEF2D JASPAR yes 21214115
chr17 27129286 27129298 MEF2A JASPAR yes 53696291
chr17 27129286 27129298 MEF2B JASPAR yes 53696292
chr17 27129286 27129298 MEF2D JASPAR yes 53696293
chr17 27129288 27129292 YY1 TRANSFAC yes 21214116
chr17 27129288 27129292 YY1 TRANSFAC yes 53696294
chr17 27129298 27129312 GATA2 JASPAR yes 21214117
chr17 27129298 27129312 GATA2 JASPAR yes 53696295
chr17 27129300 27129308 GATA3 JASPAR yes 21214118
chr17 27129300 27129308 GATA5 JASPAR yes 21214119
chr17 27129300 27129308 GATA3 JASPAR yes 53696296
chr17 27129300 27129308 GATA5 JASPAR yes 53696297
chr17 27129306 27129317 CEBPB JASPAR yes 21214120
chr17 27129306 27129317 CEBPB JASPAR yes 53696298
chr17 27129309 27129321 YY1 JASPAR yes 21214121
chr17 27129309 27129321 YY1 JASPAR yes 53696299
chr17 27129338 27129351 NR2F1 JASPAR yes 21214122
chr17 27129338 27129351 NR2F1 JASPAR yes 53696300
chr17 27129342 27129350 CREB1 JASPAR yes 21214123
chr17 27129342 27129350 CREB1 JASPAR yes 53696301
chr17 27129354 27129360 ZNF354C JASPAR yes 21214124
chr17 27129354 27129360 ZNF354C JASPAR yes 53696302
chr17 27129359 27129373 PLAG1 JASPAR yes 21214125
chr17 27129359 27129373 PLAG1 JASPAR yes 53696303
chr17 27129383 27129391 RHOXF1 JASPAR yes 21214126
chr17 27129383 27129391 RHOXF1 JASPAR yes 53696304
chr17 27129395 27129406 FOSL2 JASPAR yes 21214127
chr17 27129395 27129406 FOSL2 JASPAR yes 53696305
chr17 27129431 27129442 NRL JASPAR yes 21214128
chr17 27129431 27129442 NRL JASPAR yes 53696306
chr17 27129431 27129446 MAFK JASPAR yes 21214129
chr17 27129431 27129446 MAFK JASPAR yes 53696307
chr17 27129445 27129463 SRF JASPAR yes 21214130
chr17 27129445 27129463 SRF JASPAR yes 53696308
SNP sites on vista24310[chr17:27129097-27129445]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 27129119 rs566622787 T TC
STAT1 STAT3
4813282
chr17 27129129 rs35397064 AAG A
STAT1 STAT3
4813283
chr17 27129129 rs397857863 AAG A
STAT1 STAT3
4813284
chr17 27129168 rs150343259 G A,C no 4813285
Genes possibly regulated by vista24310[chr17:27129097-27129445]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27030215 27038872 - PROCA1 ENSG00000167525.9 27038872 0.79 0.98 15582 9775
chr17 27041299 27045447 - RAB34 ENSG00000109113.13 27045447 0.72 0.96 15583 16350
chr17 27046411 27051377 + RPL23A ENSG00000198242.9 27046411 0.83 1.0 15584 17314
chr17 27051366 27054953 - TLCD1 ENSG00000160606.6 27054953 0.83 1.0 15585 25856
chr17 27052915 27070473 + NEK8 ENSG00000160602.9 27052915 0.79 1.0 15586 23818
chr17 27071002 27077974 + TRAF4 ENSG00000076604.10 27071002 0.83 1.0 15587 41905
chr17 27082996 27182250 - FAM222B ENSG00000173065.9 27182250 0.67 1.0 15588 47195
chr17 27181956 27188085 + ERAL1 ENSG00000132591.7 27181956 0.66 0.99 15589 47489
chr17 27206353 27224697 - FLOT2 ENSG00000132589.11 27224697 0.7 1.0 15590 4748
Expression level of Genes
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miRNAs possibly regulated by vista24310[chr17:27129097-27129445]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results