EnhancerDB
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  3. vista24327[chr17:27466057-27466305]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24327[chr17:27466057-27466305]
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Tissue distribution of vista24327
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Transcription factor that possibly regulate vista24327[chr17:27466057-27466305]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 27466062 27466068 NFIC JASPAR yes 21214789
chr17 27466062 27466068 NFIC JASPAR yes 53716243
chr17 27466063 27466083 ESR1 JASPAR yes 21214790
chr17 27466063 27466083 ESR1 JASPAR yes 53716244
chr17 27466067 27466085 ESR2 JASPAR yes 21214791
chr17 27466067 27466085 ESR2 JASPAR yes 53716245
chr17 27466068 27466083 ESR2 JASPAR yes 21214792
chr17 27466068 27466083 ESR2 JASPAR yes 53716246
chr17 27466077 27466091 NR2F1 JASPAR yes 21214793
chr17 27466077 27466091 NR2F1 JASPAR yes 53716247
chr17 27466109 27466124 RFX5 JASPAR yes 21214794
chr17 27466109 27466124 RFX5 JASPAR yes 53716248
chr17 27466110 27466116 MZF1 JASPAR yes 21214795
chr17 27466110 27466116 MZF1 JASPAR yes 53716249
chr17 27466112 27466120 SP1 TRANSFAC yes 21214796
chr17 27466112 27466120 SP1 TRANSFAC yes 53716250
chr17 27466112 27466127 TFAP2A JASPAR yes 21214797
chr17 27466112 27466127 TFAP2C JASPAR yes 21214798
chr17 27466112 27466127 TFAP2A JASPAR yes 53716251
chr17 27466112 27466127 TFAP2C JASPAR yes 53716252
chr17 27466115 27466127 TFAP2A JASPAR yes 21214799
chr17 27466115 27466127 TFAP2B JASPAR yes 21214800
chr17 27466115 27466127 TFAP2C JASPAR yes 21214801
chr17 27466115 27466127 TFAP2A JASPAR yes 53716253
chr17 27466115 27466127 TFAP2B JASPAR yes 53716254
chr17 27466115 27466127 TFAP2C JASPAR yes 53716255
chr17 27466116 27466125 TFAP2A JASPAR yes 21214802
chr17 27466116 27466125 TFAP2A JASPAR yes 53716256
chr17 27466117 27466126 TFAP2A JASPAR yes 21214803
chr17 27466117 27466126 TFAP2A JASPAR yes 53716257
chr17 27466121 27466127 SP1 TRANSFAC yes 21214804
chr17 27466121 27466127 SP1 TRANSFAC yes 53716258
chr17 27466121 27466142 IRF1 JASPAR yes 21214805
chr17 27466121 27466142 IRF1 JASPAR yes 53716259
chr17 27466122 27466127 SP1 TRANSFAC yes 21214806
chr17 27466122 27466127 SP1 TRANSFAC yes 53716260
chr17 27466125 27466139 STAT1 JASPAR yes 21214807
chr17 27466125 27466139 STAT1 JASPAR yes 53716261
chr17 27466125 27466140 STAT2 JASPAR yes 21214808
chr17 27466125 27466140 STAT2 JASPAR yes 53716262
chr17 27466141 27466152 NRF1 JASPAR yes 21214809
chr17 27466141 27466152 NRF1 JASPAR yes 53716263
chr17 27466142 27466146 LFA1 TRANSFAC yes 21214810
chr17 27466142 27466146 LFA1 TRANSFAC yes 53716264
chr17 27466170 27466177 SPIB JASPAR yes 21214811
chr17 27466170 27466177 SPIB JASPAR yes 53716265
chr17 27466170 27466181 FLI1 JASPAR yes 21214812
chr17 27466170 27466181 FLI1 JASPAR yes 53716266
chr17 27466176 27466185 SNAI2 JASPAR yes 21214813
chr17 27466176 27466185 SNAI2 JASPAR yes 53716267
chr17 27466176 27466186 ID4 JASPAR yes 21214814
chr17 27466176 27466186 TCF3 JASPAR yes 21214815
chr17 27466176 27466186 TCF4 JASPAR yes 21214816
chr17 27466176 27466186 ID4 JASPAR yes 53716268
chr17 27466176 27466186 TCF3 JASPAR yes 53716269
chr17 27466176 27466186 TCF4 JASPAR yes 53716270
chr17 27466182 27466198 SOX4 JASPAR yes 21214817
chr17 27466182 27466198 SOX4 JASPAR yes 53716271
chr17 27466191 27466205 TLX1 JASPAR yes 21214818
chr17 27466191 27466205 TLX1 JASPAR yes 53716272
chr17 27466192 27466203 FLI1 JASPAR yes 21214819
chr17 27466192 27466203 FLI1 JASPAR yes 53716273
chr17 27466211 27466216 MYC TRANSFAC yes 21214820
chr17 27466211 27466216 MYC TRANSFAC yes 53716274
chr17 27466220 27466240 PPARG JASPAR yes 21214821
chr17 27466220 27466240 PPARG JASPAR yes 53716275
chr17 27466248 27466263 HSF1 JASPAR yes 21214822
chr17 27466248 27466263 HSF1 JASPAR yes 53716276
chr17 27466249 27466262 HSF4 JASPAR yes 21214823
chr17 27466249 27466262 HSF4 JASPAR yes 53716277
chr17 27466258 27466269 NFKB1 JASPAR yes 21214824
chr17 27466258 27466269 NFKB1 JASPAR yes 53716278
chr17 27466267 27466287 TP53 JASPAR yes 21214825
chr17 27466267 27466287 TP53 JASPAR yes 53716279
chr17 27466268 27466282 EBF1 JASPAR yes 21214826
chr17 27466268 27466282 EBF1 JASPAR yes 53716280
chr17 27466269 27466284 TFAP2C JASPAR yes 21214827
chr17 27466269 27466284 TFAP2C JASPAR yes 53716281
chr17 27466270 27466281 EBF1 JASPAR yes 21214828
chr17 27466270 27466281 EBF1 JASPAR yes 53716282
chr17 27466274 27466279 TFAP2A TRANSFAC yes 21214829
chr17 27466274 27466279 TFAP2A TRANSFAC yes 53716283
chr17 27466274 27466280 MZF1 JASPAR yes 21214830
chr17 27466274 27466280 MZF1 JASPAR yes 53716284
chr17 27466275 27466286 NFKB1 JASPAR yes 21214831
chr17 27466275 27466286 NFKB1 JASPAR yes 53716285
chr17 27466286 27466292 NFE2 TRANSFAC yes 21214832
chr17 27466286 27466292 NFE2 TRANSFAC yes 53716286
chr17 27466291 27466302 EBF1 JASPAR yes 21214833
chr17 27466291 27466302 EBF1 JASPAR yes 53716287
chr17 27466299 27466303 LFA1 TRANSFAC yes 21214834
chr17 27466299 27466303 LFA1 TRANSFAC yes 53716288
chr17 27466304 27466310 TCF4 TRANSFAC yes 21214835
chr17 27466304 27466310 TCF4 TRANSFAC yes 53716289
SNP sites on vista24327[chr17:27466057-27466305]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 27466127 rs529264946 G A
IRF1 SP1 STAT1 STAT2 TFAP2A TFAP2B TFAP2C
4815065
chr17 27466169 rs145845751 C CCA no 4815066
chr17 27466169 rs565709903 C CCA no 4815067
chr17 27466210 rs56769926 T C no 4815068
Genes possibly regulated by vista24327[chr17:27466057-27466305]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27400528 27507430 - MYO18A ENSG00000196535.10 27507430 0.67 1.0 15595 58875
chr17 27400537 27418537 - TIAF1 ENSG00000221995.4 27418537 0.68 0.99 15596 52480
Expression level of Genes
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miRNAs possibly regulated by vista24327[chr17:27466057-27466305]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results