EnhancerDB
  1. Home
  2. Enhancers
  3. vista24328[chr17:27473466-27473709]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24328[chr17:27473466-27473709]
Back to top
Tissue distribution of vista24328
Back to top
Transcription factor that possibly regulate vista24328[chr17:27473466-27473709]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 27473373 27473757 USF1 UCSC Txn Factor no Conserved 108246517
chr17 27473413 27473777 NFYB UCSC Txn Factor no Conserved 108246530
chr17 27473464 27473485 ZNF263 JASPAR yes 21214836
chr17 27473464 27473485 ZNF263 JASPAR yes 53717234
chr17 27473468 27473489 ZNF263 JASPAR yes 21214837
chr17 27473468 27473489 ZNF263 JASPAR yes 53717235
chr17 27473502 27473506 YY1 TRANSFAC yes 21214838
chr17 27473502 27473506 YY1 TRANSFAC yes 53717236
chr17 27473507 27473520 TFAP2A JASPAR yes 21214839
chr17 27473507 27473520 TFAP2B JASPAR yes 21214840
chr17 27473507 27473520 TFAP2C JASPAR yes 21214841
chr17 27473507 27473520 TFAP2A JASPAR yes 53717237
chr17 27473507 27473520 TFAP2B JASPAR yes 53717238
chr17 27473507 27473520 TFAP2C JASPAR yes 53717239
chr17 27473510 27473521 EBF1 JASPAR yes 21214842
chr17 27473510 27473521 EBF1 JASPAR yes 53717240
chr17 27473514 27473519 TFAP2A TRANSFAC yes 21214843
chr17 27473514 27473519 TFAP2A TRANSFAC yes 53717241
chr17 27473514 27473520 MZF1 JASPAR yes 21214844
chr17 27473514 27473520 MZF1 JASPAR yes 53717242
chr17 27473519 27473529 SP1 JASPAR yes 21214845
chr17 27473519 27473529 SP1 JASPAR yes 53717243
chr17 27473519 27473539 RREB1 JASPAR yes 21214846
chr17 27473519 27473539 RREB1 JASPAR yes 53717244
chr17 27473528 27473538 TFE3 JASPAR yes 21214847
chr17 27473528 27473538 TFEB JASPAR yes 21214848
chr17 27473528 27473538 TFEC JASPAR yes 21214849
chr17 27473528 27473538 TFE3 JASPAR yes 53717245
chr17 27473528 27473538 TFEB JASPAR yes 53717246
chr17 27473528 27473538 TFEC JASPAR yes 53717247
chr17 27473528 27473539 USF1 JASPAR yes 21214850
chr17 27473528 27473539 USF1 JASPAR yes 53717248
chr17 27473541 27473556 NFYB JASPAR yes 21214851
chr17 27473541 27473556 NFYB JASPAR yes 53717249
chr17 27473543 27473559 NFYA JASPAR yes 21214852
chr17 27473543 27473559 NFYA JASPAR yes 53717250
chr17 27473544 27473562 NFYA JASPAR yes 21214853
chr17 27473544 27473562 NFYA JASPAR yes 53717251
chr17 27473548 27473552 H1TF2 TRANSFAC yes 21214854
chr17 27473548 27473552 NFE TRANSFAC yes 21214855
chr17 27473548 27473552 SRF TRANSFAC yes 21214856
chr17 27473548 27473552 H1TF2 TRANSFAC yes 53717252
chr17 27473548 27473552 NFE TRANSFAC yes 53717253
chr17 27473548 27473552 SRF TRANSFAC yes 53717254
chr17 27473558 27473563 GATA2 JASPAR yes 21214857
chr17 27473558 27473563 GATA2 JASPAR yes 53717255
chr17 27473559 27473574 NFYB JASPAR yes 21214858
chr17 27473559 27473574 NFYB JASPAR yes 53717256
chr17 27473561 27473577 NFYA JASPAR yes 21214859
chr17 27473561 27473577 NFYA JASPAR yes 53717257
chr17 27473562 27473580 NFYA JASPAR yes 21214860
chr17 27473562 27473580 NFYA JASPAR yes 53717258
chr17 27473566 27473570 H1TF2 TRANSFAC yes 21214861
chr17 27473566 27473570 NFE TRANSFAC yes 21214862
chr17 27473566 27473570 SRF TRANSFAC yes 21214863
chr17 27473566 27473570 H1TF2 TRANSFAC yes 53717259
chr17 27473566 27473570 NFE TRANSFAC yes 53717260
chr17 27473566 27473570 SRF TRANSFAC yes 53717261
chr17 27473574 27473589 TFAP2A JASPAR yes 21214864
chr17 27473574 27473589 TFAP2C JASPAR yes 21214865
chr17 27473574 27473589 TFAP2A JASPAR yes 53717262
chr17 27473574 27473589 TFAP2C JASPAR yes 53717263
chr17 27473576 27473581 GATA2 JASPAR yes 21214866
chr17 27473576 27473581 GATA2 JASPAR yes 53717264
chr17 27473576 27473591 TFAP2A JASPAR yes 21214867
chr17 27473576 27473591 TFAP2A JASPAR yes 53717265
chr17 27473596 27473616 PPARG JASPAR yes 21214868
chr17 27473596 27473616 PPARG JASPAR yes 53717266
chr17 27473601 27473605 LFA1 TRANSFAC yes 21214869
chr17 27473601 27473605 LFA1 TRANSFAC yes 53717267
chr17 27473602 27473612 TFEB JASPAR yes 21214870
chr17 27473602 27473612 TFEC JASPAR yes 21214871
chr17 27473602 27473612 TFEB JASPAR yes 53717268
chr17 27473602 27473612 TFEC JASPAR yes 53717269
chr17 27473602 27473613 USF1 JASPAR yes 21214872
chr17 27473602 27473613 USF2 JASPAR yes 21214873
chr17 27473602 27473613 USF1 JASPAR yes 53717270
chr17 27473602 27473613 USF2 JASPAR yes 53717271
chr17 27473605 27473620 NFYB JASPAR yes 21214874
chr17 27473605 27473620 NFYB JASPAR yes 53717272
chr17 27473607 27473620 DUXA JASPAR yes 21214875
chr17 27473607 27473620 DUXA JASPAR yes 53717273
chr17 27473608 27473619 DUX4 JASPAR yes 21214876
chr17 27473608 27473619 DUX4 JASPAR yes 53717274
chr17 27473612 27473616 H1TF2 TRANSFAC yes 21214877
chr17 27473612 27473616 NFE TRANSFAC yes 21214878
chr17 27473612 27473616 SRF TRANSFAC yes 21214879
chr17 27473612 27473616 H1TF2 TRANSFAC yes 53717275
chr17 27473612 27473616 NFE TRANSFAC yes 53717276
chr17 27473612 27473616 SRF TRANSFAC yes 53717277
chr17 27473624 27473635 DMRT3 JASPAR yes 21214880
chr17 27473624 27473635 DMRT3 JASPAR yes 53717278
chr17 27473626 27473631 GATA2 JASPAR yes 21214881
chr17 27473626 27473631 GATA2 JASPAR yes 53717279
chr17 27473631 27473643 IRF1 JASPAR yes 21214882
chr17 27473631 27473643 IRF1 JASPAR yes 53717280
chr17 27473643 27473648 TFAP2A TRANSFAC yes 21214883
chr17 27473643 27473648 TFAP2A TRANSFAC yes 53717281
chr17 27473643 27473649 MZF1 JASPAR yes 21214884
chr17 27473643 27473649 MZF1 JASPAR yes 53717282
chr17 27473644 27473654 GSC2 JASPAR yes 21214885
chr17 27473644 27473654 GSC JASPAR yes 21214886
chr17 27473644 27473654 GSC2 JASPAR yes 53717283
chr17 27473644 27473654 GSC JASPAR yes 53717284
chr17 27473645 27473653 RHOXF1 JASPAR yes 21214887
chr17 27473645 27473653 RHOXF1 JASPAR yes 53717285
chr17 27473645 27473654 PITX3 JASPAR yes 21214888
chr17 27473645 27473654 PITX3 JASPAR yes 53717286
chr17 27473652 27473658 TCF1 TRANSFAC yes 21214889
chr17 27473652 27473658 TCF1 TRANSFAC yes 53717287
chr17 27473671 27473675 NFE TRANSFAC yes 21214890
chr17 27473671 27473675 NFE TRANSFAC yes 53717288
chr17 27473672 27473677 GATA2 JASPAR yes 21214891
chr17 27473672 27473677 GATA2 JASPAR yes 53717289
chr17 27473673 27473679 ZNF354C JASPAR yes 21214892
chr17 27473673 27473679 ZNF354C JASPAR yes 53717290
chr17 27473702 27473706 YY1 TRANSFAC yes 21214893
chr17 27473702 27473706 YY1 TRANSFAC yes 53717291
SNP sites on vista24328[chr17:27473466-27473709]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 27473607 rs139666685 T A,C
DUXA NFYB PPARG TFEB TFEC USF1 USF2
4815143
Genes possibly regulated by vista24328[chr17:27473466-27473709]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27400528 27507430 - MYO18A ENSG00000196535.10 27507430 0.67 1.0 15595 66279
chr17 27400537 27418537 - TIAF1 ENSG00000221995.4 27418537 0.68 0.99 15596 45071
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24328[chr17:27473466-27473709]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results