EnhancerDB
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  3. vista24331[chr17:27506307-27506816]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24331[chr17:27506307-27506816]
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Tissue distribution of vista24331
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Transcription factor that possibly regulate vista24331[chr17:27506307-27506816]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 27505085 27507023 POLR2A UCSC Txn Factor no Conserved 108246781
chr17 27506149 27506861 TAF1 UCSC Txn Factor no Conserved 108246807
chr17 27506158 27506618 MYC UCSC Txn Factor no Conserved 108246809
chr17 27506165 27506624 MAX UCSC Txn Factor no Conserved 108246815
chr17 27506183 27506533 STAT5A UCSC Txn Factor no Conserved 108246819
chr17 27506196 27506644 EP300 UCSC Txn Factor no Conserved 108246823
chr17 27506235 27506945 GATA1 UCSC Txn Factor no Conserved 108246837
chr17 27506249 27506479 TAL1 UCSC Txn Factor no Conserved 108246839
chr17 27506253 27506484 TEAD4 UCSC Txn Factor no Conserved 108246843
chr17 27506310 27506328 RARA JASPAR yes 21215013
chr17 27506324 27506334 LHX6 JASPAR yes 21215014
chr17 27506334 27506347 ZBTB18 JASPAR yes 21215015
chr17 27506335 27506345 MAX JASPAR yes 21215016
chr17 27506339 27506349 MAX JASPAR yes 21215017
chr17 27506356 27506360 LFA1 TRANSFAC yes 21215018
chr17 27506360 27506381 ZNF263 JASPAR yes 21215019
chr17 27506373 27506383 ZNF740 JASPAR yes 21215020
chr17 27506373 27506393 RREB1 JASPAR yes 21215021
chr17 27506374 27506386 INSM1 JASPAR yes 21215022
chr17 27506377 27506397 RREB1 JASPAR yes 21215023
chr17 27506384 27506390 SOX10 JASPAR yes 21215024
chr17 27506392 27506396 H1TF2 TRANSFAC yes 21215025
chr17 27506392 27506396 NFE TRANSFAC yes 21215026
chr17 27506392 27506396 SRF TRANSFAC yes 21215027
chr17 27506404 27506408 NFE TRANSFAC yes 21215028
chr17 27506458 27506479 REST JASPAR yes 21215029
chr17 27506459 27506478 REST JASPAR yes 21215030
chr17 27506474 27506484 ZNF740 JASPAR yes 21215031
chr17 27506484 27506487 MYB TRANSFAC yes 21215032
chr17 27506490 27506500 SP1 JASPAR yes 21215033
chr17 27506491 27506495 LFA1 TRANSFAC yes 21215034
chr17 27506494 27506509 NR2C2 JASPAR yes 21215035
chr17 27506495 27506509 RXRB JASPAR yes 21215036
chr17 27506495 27506509 RXRG JASPAR yes 21215037
chr17 27506496 27506506 SP1 JASPAR yes 21215038
chr17 27506504 27506508 LFA1 TRANSFAC yes 21215039
chr17 27506509 27506530 ZNF263 JASPAR yes 21215040
chr17 27506525 27506543 NFYA JASPAR yes 21215041
chr17 27506528 27506544 NFYA JASPAR yes 21215042
chr17 27506541 27506554 ZBTB18 JASPAR yes 21215043
chr17 27506552 27506560 MEIS2 JASPAR yes 21215044
chr17 27506552 27506560 MEIS3 JASPAR yes 21215045
chr17 27506556 27506575 PAX5 JASPAR yes 21215046
chr17 27506565 27506571 SP1 TRANSFAC yes 21215047
chr17 27506566 27506571 SP1 TRANSFAC yes 21215048
chr17 27506567 27506572 SP1 TRANSFAC yes 21215049
chr17 27506567 27506573 SP1 TRANSFAC yes 21215050
chr17 27506579 27506584 SP1 TRANSFAC yes 21215051
chr17 27506583 27506602 REST JASPAR yes 21215052
chr17 27506586 27506597 EBF1 JASPAR yes 21215053
chr17 27506594 27506606 TFAP2A JASPAR yes 21215054
chr17 27506594 27506606 TFAP2B JASPAR yes 21215055
chr17 27506594 27506606 TFAP2C JASPAR yes 21215056
chr17 27506594 27506609 TFAP2A JASPAR yes 21215057
chr17 27506594 27506609 TFAP2C JASPAR yes 21215058
chr17 27506595 27506606 TFAP2A JASPAR yes 21215059
chr17 27506595 27506606 TFAP2B JASPAR yes 21215060
chr17 27506595 27506606 TFAP2C JASPAR yes 21215061
chr17 27506595 27506607 INSM1 JASPAR yes 21215062
chr17 27506595 27506615 ESR1 JASPAR yes 21215063
chr17 27506596 27506605 TFAP2A JASPAR yes 21215064
chr17 27506600 27506615 ESR2 JASPAR yes 21215065
chr17 27506601 27506605 LFA1 TRANSFAC yes 21215066
chr17 27506619 27506633 PLAG1 JASPAR yes 21215067
chr17 27506620 27506640 RREB1 JASPAR yes 21215068
chr17 27506629 27506639 SP1 JASPAR yes 21215069
chr17 27506640 27506651 STAT3 JASPAR yes 21215070
chr17 27506652 27506662 SREBF1 JASPAR yes 21215071
chr17 27506674 27506678 LFA1 TRANSFAC yes 21215072
chr17 27506674 27506689 AR JASPAR yes 21215073
chr17 27506691 27506700 PITX3 JASPAR yes 21215074
chr17 27506691 27506701 GSC2 JASPAR yes 21215075
chr17 27506691 27506701 GSC JASPAR yes 21215076
chr17 27506692 27506700 OTX1 JASPAR yes 21215077
chr17 27506696 27506702 MZF1 JASPAR yes 21215078
chr17 27506710 27506724 PLAG1 JASPAR yes 21215079
chr17 27506713 27506731 RARA JASPAR yes 21215080
chr17 27506717 27506732 LEF1 JASPAR yes 21215081
chr17 27506731 27506735 NFE TRANSFAC yes 21215082
chr17 27506733 27506744 EBF1 JASPAR yes 21215083
chr17 27506739 27506749 SP1 JASPAR yes 21215084
chr17 27506739 27506760 ZNF263 JASPAR yes 21215085
chr17 27506740 27506747 CEBPA TRANSFAC yes 21215086
chr17 27506746 27506751 SP1 TRANSFAC yes 21215087
chr17 27506754 27506759 ETS2 TRANSFAC yes 21215088
chr17 27506755 27506765 SP1 JASPAR yes 21215089
chr17 27506768 27506777 SOX9 JASPAR yes 21215090
chr17 27506770 27506779 SRY JASPAR yes 21215091
chr17 27506777 27506789 PKNOX1 JASPAR yes 21215092
chr17 27506777 27506789 PKNOX2 JASPAR yes 21215093
chr17 27506777 27506789 TGIF1 JASPAR yes 21215094
chr17 27506777 27506789 TGIF2 JASPAR yes 21215095
chr17 27506778 27506788 MSC JASPAR yes 21215096
chr17 27506783 27506787 NFE TRANSFAC yes 21215097
chr17 27506783 27506796 SMAD2 JASPAR yes 21215098
chr17 27506788 27506800 NHLH1 JASPAR yes 21215099
chr17 27506789 27506799 MSC JASPAR yes 21215100
chr17 27506789 27506799 NHLH1 JASPAR yes 21215101
SNP sites on vista24331[chr17:27506307-27506816]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 27506558 rs62065188 A G
EP300 GATA1 MAX MEIS2 MEIS3 MYC PAX5 POLR2A TAF1
4815446
chr17 27506653 rs150333812 G A
GATA1 POLR2A SREBF1 TAF1
4815447
Genes possibly regulated by vista24331[chr17:27506307-27506816]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27400528 27507430 - MYO18A ENSG00000196535.10 27507430 0.67 1.0 15595 99386
chr17 27400537 27418537 - TIAF1 ENSG00000221995.4 27418537 0.68 0.99 15596 12230
chr17 27573881 27581512 + CRYBA1 ENSG00000108255.3 27573881 0.81 1.0 15597 32935
Expression level of Genes
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miRNAs possibly regulated by vista24331[chr17:27506307-27506816]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results