EnhancerDB
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  3. vista24332[chr17:27530741-27530989]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24332[chr17:27530741-27530989]
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Tissue distribution of vista24332
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Transcription factor that possibly regulate vista24332[chr17:27530741-27530989]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 27530724 27530742 RARA JASPAR yes 21215102
chr17 27530724 27530742 RARA JASPAR yes 53722103
chr17 27530736 27530751 MEF2C JASPAR yes 21215103
chr17 27530736 27530751 MEF2C JASPAR yes 53722104
chr17 27530737 27530752 MEF2A JASPAR yes 21215104
chr17 27530737 27530752 MEF2A JASPAR yes 53722105
chr17 27530738 27530750 MEF2A JASPAR yes 21215105
chr17 27530738 27530750 MEF2D JASPAR yes 21215106
chr17 27530738 27530750 MEF2A JASPAR yes 53722106
chr17 27530738 27530750 MEF2D JASPAR yes 53722107
chr17 27530760 27530775 FOXA1 JASPAR yes 21215107
chr17 27530760 27530775 FOXA1 JASPAR yes 53722108
chr17 27530762 27530774 FOXC2 JASPAR yes 21215108
chr17 27530762 27530774 FOXC2 JASPAR yes 53722109
chr17 27530763 27530771 FOXG1 JASPAR yes 21215109
chr17 27530763 27530771 FOXG1 JASPAR yes 53722110
chr17 27530763 27530774 FOXB1 JASPAR yes 21215110
chr17 27530763 27530774 FOXC1 JASPAR yes 21215111
chr17 27530763 27530774 FOXB1 JASPAR yes 53722111
chr17 27530763 27530774 FOXC1 JASPAR yes 53722112
chr17 27530764 27530775 FOXA1 JASPAR yes 21215112
chr17 27530764 27530775 FOXA1 JASPAR yes 53722113
chr17 27530777 27530783 HiNF-A TRANSFAC yes 21215113
chr17 27530777 27530783 HiNF-A TRANSFAC yes 53722114
chr17 27530785 27530788 MYB TRANSFAC yes 21215114
chr17 27530785 27530788 MYB TRANSFAC yes 53722115
chr17 27530813 27530819 NFIC JASPAR yes 21215115
chr17 27530813 27530819 NFIC JASPAR yes 53722116
chr17 27530817 27530838 IRF1 JASPAR yes 21215116
chr17 27530817 27530838 IRF1 JASPAR yes 53722117
chr17 27530820 27530834 STAT1 JASPAR yes 21215117
chr17 27530820 27530834 STAT1 JASPAR yes 53722118
chr17 27530828 27530848 RREB1 JASPAR yes 21215118
chr17 27530828 27530848 RREB1 JASPAR yes 53722119
chr17 27530834 27530838 YY1 TRANSFAC yes 21215119
chr17 27530834 27530838 YY1 TRANSFAC yes 53722120
chr17 27530847 27530862 MEF2A JASPAR yes 21215120
chr17 27530847 27530862 MEF2A JASPAR yes 53722121
chr17 27530855 27530876 IRF1 JASPAR yes 21215121
chr17 27530855 27530876 IRF1 JASPAR yes 53722122
chr17 27530856 27530860 TEAD2 TRANSFAC yes 21215122
chr17 27530856 27530860 TEAD2 TRANSFAC yes 53722123
chr17 27530857 27530872 PRDM1 JASPAR yes 21215123
chr17 27530857 27530872 STAT2 JASPAR yes 21215124
chr17 27530857 27530872 PRDM1 JASPAR yes 53722124
chr17 27530857 27530872 STAT2 JASPAR yes 53722125
chr17 27530858 27530869 PHOX2A JASPAR yes 21215125
chr17 27530858 27530869 PROP1 JASPAR yes 21215126
chr17 27530858 27530869 PHOX2A JASPAR yes 53722126
chr17 27530858 27530869 PROP1 JASPAR yes 53722127
chr17 27530858 27530872 STAT1 JASPAR yes 21215127
chr17 27530858 27530872 STAT1 JASPAR yes 53722128
chr17 27530859 27530873 IRF7 JASPAR yes 21215128
chr17 27530859 27530873 IRF7 JASPAR yes 53722129
chr17 27530859 27530874 IRF9 JASPAR yes 21215129
chr17 27530859 27530874 IRF9 JASPAR yes 53722130
chr17 27530861 27530875 POU4F1 JASPAR yes 21215130
chr17 27530861 27530875 POU4F1 JASPAR yes 53722131
chr17 27530864 27530868 YY1 TRANSFAC yes 21215131
chr17 27530864 27530868 YY1 TRANSFAC yes 53722132
chr17 27530877 27530881 YY1 TRANSFAC yes 21215132
chr17 27530877 27530881 YY1 TRANSFAC yes 53722133
chr17 27530901 27530905 NFE TRANSFAC yes 21215133
chr17 27530901 27530905 NFE TRANSFAC yes 53722134
chr17 27530908 27530919 PHOX2A JASPAR yes 21215134
chr17 27530908 27530919 PHOX2A JASPAR yes 53722135
chr17 27530916 27530926 NFATC3 JASPAR yes 21215135
chr17 27530916 27530926 NFATC3 JASPAR yes 53722136
chr17 27530917 27530924 NFATC2 JASPAR yes 21215136
chr17 27530917 27530924 NFATC2 JASPAR yes 53722137
chr17 27530925 27530938 TFAP2B JASPAR yes 21215137
chr17 27530925 27530938 TFAP2B JASPAR yes 53722138
chr17 27530943 27530949 HiNF-A TRANSFAC yes 21215138
chr17 27530943 27530949 HiNF-A TRANSFAC yes 53722139
chr17 27530967 27530982 LEF1 JASPAR yes 21215139
chr17 27530967 27530982 LEF1 JASPAR yes 53722140
chr17 27530989 27531003 XBP1 JASPAR yes 21215140
chr17 27530989 27531003 XBP1 JASPAR yes 53722141
SNP sites on vista24332[chr17:27530741-27530989]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista24332[chr17:27530741-27530989]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27400528 27507430 - MYO18A ENSG00000196535.10 27507430 0.67 1.0 15595 76689
chr17 27573881 27581512 + CRYBA1 ENSG00000108255.3 27573881 0.81 1.0 15597 57108
chr17 27582854 27621136 - NUFIP2 ENSG00000108256.4 27621136 0.72 0.99 15598 9853
Expression level of Genes
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miRNAs possibly regulated by vista24332[chr17:27530741-27530989]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results