EnhancerDB
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  3. vista24336[chr17:27619094-27619880]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24336[chr17:27619094-27619880]
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Tissue distribution of vista24336
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Transcription factor that possibly regulate vista24336[chr17:27619094-27619880]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 27619186 27621737 POLR2A UCSC Txn Factor no Conserved 108247138
chr17 27619597 27619889 E2F6 UCSC Txn Factor no Conserved 108247148
chr17 27619828 27620077 EGR1 UCSC Txn Factor no Conserved 108247156
chr17 27619871 27620287 YY1 UCSC Txn Factor no Conserved 108247159
chr17 27619127 27619141 RXRB JASPAR yes 21215272
chr17 27619127 27619141 RXRG JASPAR yes 21215273
chr17 27619127 27619142 NR2C2 JASPAR yes 21215274
chr17 27619127 27619142 PRDM1 JASPAR yes 21215275
chr17 27619157 27619168 DUX4 JASPAR yes 21215276
chr17 27619166 27619171 TFAP2A TRANSFAC yes 21215277
chr17 27619166 27619172 MZF1 JASPAR yes 21215278
chr17 27619168 27619176 RHOXF1 JASPAR yes 21215279
chr17 27619174 27619188 ONECUT1 JASPAR yes 21215280
chr17 27619174 27619188 ONECUT2 JASPAR yes 21215281
chr17 27619174 27619188 ONECUT3 JASPAR yes 21215282
chr17 27619175 27619185 CUX1 JASPAR yes 21215283
chr17 27619175 27619185 CUX2 JASPAR yes 21215284
chr17 27619211 27619214 MYB TRANSFAC yes 21215285
chr17 27619233 27619249 ZNF143 JASPAR yes 21215286
chr17 27619238 27619250 YY1 JASPAR yes 21215287
chr17 27619254 27619257 MYB TRANSFAC yes 21215288
chr17 27619289 27619303 STAT1 JASPAR yes 21215289
chr17 27619300 27619313 NR2F1 JASPAR yes 21215290
chr17 27619304 27619308 ESR1 TRANSFAC yes 21215291
chr17 27619323 27619333 MZF1 JASPAR yes 21215292
chr17 27619324 27619330 MZF1 JASPAR yes 21215293
chr17 27619333 27619336 MYB TRANSFAC yes 21215294
chr17 27619336 27619340 YY1 TRANSFAC yes 21215295
chr17 27619372 27619390 RARA JASPAR yes 21215296
chr17 27619397 27619403 MAZ TRANSFAC yes 21215297
chr17 27619418 27619439 IRF1 JASPAR yes 21215298
chr17 27619419 27619440 IRF1 JASPAR yes 21215299
chr17 27619420 27619441 IRF1 JASPAR yes 21215300
chr17 27619424 27619439 FOXP1 JASPAR yes 21215301
chr17 27619425 27619440 FOXP1 JASPAR yes 21215302
chr17 27619426 27619441 FOXP1 JASPAR yes 21215303
chr17 27619427 27619442 FOXP1 JASPAR yes 21215304
chr17 27619428 27619443 FOXP1 JASPAR yes 21215305
chr17 27619429 27619444 FOXP1 JASPAR yes 21215306
chr17 27619430 27619445 FOXP1 JASPAR yes 21215307
chr17 27619460 27619465 ETS2 TRANSFAC yes 21215308
chr17 27619480 27619493 TFAP2B JASPAR yes 21215309
chr17 27619488 27619493 SP1 TRANSFAC yes 21215310
chr17 27619493 27619507 MTF1 JASPAR yes 21215311
chr17 27619579 27619594 TFAP2A JASPAR yes 21215312
chr17 27619579 27619594 TFAP2C JASPAR yes 21215313
chr17 27619581 27619593 TFAP2B JASPAR yes 21215314
chr17 27619581 27619593 TFAP2C JASPAR yes 21215315
chr17 27619581 27619596 TFAP2A JASPAR yes 21215316
chr17 27619581 27619596 TFAP2C JASPAR yes 21215317
chr17 27619582 27619593 TFAP2A JASPAR yes 21215318
chr17 27619582 27619593 TFAP2B JASPAR yes 21215319
chr17 27619582 27619593 TFAP2C JASPAR yes 21215320
chr17 27619614 27619634 RREB1 JASPAR yes 21215321
chr17 27619615 27619629 PLAG1 JASPAR yes 21215322
chr17 27619616 27619622 SP1 TRANSFAC yes 21215323
chr17 27619616 27619626 SP1 JASPAR yes 21215324
chr17 27619619 27619629 SP1 JASPAR yes 21215325
chr17 27619621 27619626 SP1 TRANSFAC yes 21215326
chr17 27619621 27619627 SP1 TRANSFAC yes 21215327
chr17 27619621 27619628 SP1 TRANSFAC yes 21215328
chr17 27619622 27619637 TFAP2A JASPAR yes 21215329
chr17 27619622 27619637 TFAP2C JASPAR yes 21215330
chr17 27619623 27619633 ZNF740 JASPAR yes 21215331
chr17 27619624 27619636 TFAP2A JASPAR yes 21215332
chr17 27619624 27619638 PLAG1 JASPAR yes 21215333
chr17 27619624 27619645 ZNF263 JASPAR yes 21215334
chr17 27619625 27619636 TFAP2A JASPAR yes 21215335
chr17 27619625 27619639 PLAG1 JASPAR yes 21215336
chr17 27619626 27619635 TFAP2A JASPAR yes 21215337
chr17 27619662 27619667 SP1 TRANSFAC yes 21215338
chr17 27619663 27619674 TFAP2A JASPAR yes 21215339
chr17 27619664 27619673 TFAP2A JASPAR yes 21215340
chr17 27619671 27619692 ZNF263 JASPAR yes 21215341
chr17 27619675 27619686 E2F6 JASPAR yes 21215342
chr17 27619704 27619715 E2F4 JASPAR yes 21215343
chr17 27619706 27619716 SP1 JASPAR yes 21215344
chr17 27619707 27619713 SP1 TRANSFAC yes 21215345
chr17 27619707 27619717 SP1 JASPAR yes 21215346
chr17 27619708 27619715 SP1 TRANSFAC yes 21215347
chr17 27619709 27619714 SP1 TRANSFAC yes 21215348
chr17 27619709 27619715 SP1 TRANSFAC yes 21215349
chr17 27619725 27619740 ZIC3 JASPAR yes 21215350
chr17 27619726 27619737 E2F4 JASPAR yes 21215351
chr17 27619726 27619737 E2F6 JASPAR yes 21215352
chr17 27619743 27619754 E2F1 JASPAR yes 21215353
chr17 27619744 27619755 E2F4 JASPAR yes 21215354
chr17 27619744 27619755 E2F6 JASPAR yes 21215355
chr17 27619746 27619754 E2F1 JASPAR yes 21215356
chr17 27619771 27619776 SP1 TRANSFAC yes 21215357
chr17 27619790 27619803 TFAP2A JASPAR yes 21215358
chr17 27619803 27619814 E2F6 JASPAR yes 21215359
chr17 27619806 27619816 SP1 JASPAR yes 21215360
chr17 27619807 27619827 RREB1 JASPAR yes 21215361
chr17 27619808 27619818 ZNF740 JASPAR yes 21215362
chr17 27619810 27619831 ZNF263 JASPAR yes 21215363
chr17 27619811 27619831 RREB1 JASPAR yes 21215364
chr17 27619812 27619832 RREB1 JASPAR yes 21215365
chr17 27619816 27619836 RREB1 JASPAR yes 21215366
chr17 27619823 27619828 SP1 TRANSFAC yes 21215367
chr17 27619823 27619829 SP1 TRANSFAC yes 21215368
chr17 27619823 27619830 SP1 TRANSFAC yes 21215369
chr17 27619824 27619832 WT1 TRANSFAC yes 21215370
chr17 27619826 27619835 SP1 TRANSFAC yes 21215371
chr17 27619827 27619833 SP1 TRANSFAC yes 21215372
chr17 27619827 27619837 SP1 JASPAR yes 21215373
chr17 27619828 27619835 SP1 TRANSFAC yes 21215374
chr17 27619829 27619834 SP1 TRANSFAC yes 21215375
chr17 27619829 27619835 SP1 TRANSFAC yes 21215376
chr17 27619832 27619842 SP1 JASPAR yes 21215377
chr17 27619835 27619845 SREBF1 JASPAR yes 21215378
chr17 27619835 27619845 SREBF2 JASPAR yes 21215379
chr17 27619836 27619850 EBF1 JASPAR yes 21215380
chr17 27619837 27619851 PLAG1 JASPAR yes 21215381
chr17 27619849 27619854 SP1 TRANSFAC yes 21215382
chr17 27619851 27619860 TFAP2A JASPAR yes 21215383
chr17 27619855 27619860 SP1 TRANSFAC yes 21215384
SNP sites on vista24336[chr17:27619094-27619880]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 27619097 rs546305810 A G no 4816214
chr17 27619120 rs371947574 TTC T no 4816215
chr17 27619190 rs567056672 A G
POLR2A
4816216
chr17 27619227 rs112130648 C T
POLR2A
4816217
chr17 27619339 rs150175027 T G
POLR2A YY1
4816218
chr17 27619344 rs192982917 T A
POLR2A
4816219
chr17 27619384 rs138637053 G A
POLR2A RARA
4816220
chr17 27619550 rs4609913 C T
POLR2A
4816221
chr17 27619595 rs555952124 C G
POLR2A TFAP2A TFAP2C
4816222
chr17 27619641 rs34083754 G A
E2F6 POLR2A ZNF263
4816223
chr17 27619846 rs544899016 G A
E2F6 EBF1 EGR1 PLAG1 POLR2A
4816224
Genes possibly regulated by vista24336[chr17:27619094-27619880]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27573881 27581512 + CRYBA1 ENSG00000108255.3 27573881 0.81 1.0 15597 54787
chr17 27582854 27621136 - NUFIP2 ENSG00000108256.4 27621136 0.72 0.99 15598 98744
chr17 27717482 27878922 + TAOK1 ENSG00000160551.5 27717482 0.73 0.99 15599 2398
Expression level of Genes
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miRNAs possibly regulated by vista24336[chr17:27619094-27619880]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results