EnhancerDB
  1. Home
  2. Enhancers
  3. vista24343[chr17:27918115-27918172]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24343[chr17:27918115-27918172]
Back to top
Tissue distribution of vista24343
Back to top
Transcription factor that possibly regulate vista24343[chr17:27918115-27918172]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 27917391 27919728 POLR2A UCSC Txn Factor no Conserved 108247168
chr17 27917391 27919728 POLR2A UCSC Txn Factor no Conserved 108247169
chr17 27917391 27919728 POLR2A UCSC Txn Factor no Conserved 108247170
chr17 27918096 27918532 MAX UCSC Txn Factor no Conserved 108247177
chr17 27918104 27918115 E2F4 JASPAR yes 21215644
chr17 27918104 27918115 E2F4 JASPAR yes 53742993
chr17 27918108 27918120 INSM1 JASPAR yes 21215645
chr17 27918108 27918120 INSM1 JASPAR yes 53742995
chr17 27918112 27918127 NR2C2 JASPAR yes 21215646
chr17 27918112 27918127 NR2C2 JASPAR yes 53742996
chr17 27918113 27918127 PLAG1 JASPAR yes 21215647
chr17 27918113 27918127 PLAG1 JASPAR yes 53742997
chr17 27918113 27918134 ZNF263 JASPAR yes 21215648
chr17 27918113 27918134 ZNF263 JASPAR yes 53742998
chr17 27918115 27918136 ZNF263 JASPAR yes 21215649
chr17 27918115 27918136 ZNF263 JASPAR yes 53742999
chr17 27918120 27918130 SP1 JASPAR yes 21215650
chr17 27918120 27918130 SP1 JASPAR yes 53743000
chr17 27918121 27918129 SP1 TRANSFAC yes 21215651
chr17 27918121 27918129 SP1 TRANSFAC yes 53743001
chr17 27918122 27918127 SP1 TRANSFAC yes 21215652
chr17 27918122 27918127 SP1 TRANSFAC yes 53743002
chr17 27918123 27918128 SP1 TRANSFAC yes 21215653
chr17 27918123 27918128 SP1 TRANSFAC yes 53743003
chr17 27918123 27918129 SP1 TRANSFAC yes 21215654
chr17 27918123 27918129 SP1 TRANSFAC yes 53743004
chr17 27918127 27918148 ZNF263 JASPAR yes 21215655
chr17 27918127 27918148 ZNF263 JASPAR yes 53743005
chr17 27918129 27918142 SMAD2 JASPAR yes 21215656
chr17 27918129 27918142 SMAD2 JASPAR yes 53743006
chr17 27918144 27918159 RFX5 JASPAR yes 21215657
chr17 27918144 27918159 RFX5 JASPAR yes 53743007
chr17 27918156 27918168 HES7 JASPAR yes 21215658
chr17 27918156 27918168 HES7 JASPAR yes 53743008
SNP sites on vista24343[chr17:27918115-27918172]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 27918123 rs571668852 G A
MAX NR2C2 PLAG1 POLR2A SP1 ZNF263
4817346
Genes possibly regulated by vista24343[chr17:27918115-27918172]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27887565 27894155 - ABHD15 ENSG00000168792.4 27894155 0.66 0.99 15600 76040
chr17 27893070 27900175 + TP53I13 ENSG00000167543.11 27893070 0.6 1.0 15601 74955
chr17 27900487 27921072 - GIT1 ENSG00000108262.11 27921072 0.72 1.0 15602 97100
chr17 27916787 27941779 + ANKRD13B ENSG00000198720.8 27916787 0.8 1.0 15603 98672
chr17 27941774 27949925 - CORO6 ENSG00000167549.14 27949925 0.94 1.0 15604 68247
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24343[chr17:27918115-27918172]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results