EnhancerDB
  1. Home
  2. Enhancers
  3. vista24350[chr17:28019224-28019454]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24350[chr17:28019224-28019454]
Back to top
Tissue distribution of vista24350
Back to top
Transcription factor that possibly regulate vista24350[chr17:28019224-28019454]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 28019213 28019564 JUN UCSC Txn Factor no Conserved 108247415
chr17 28019224 28019499 FOS UCSC Txn Factor no Conserved 108247418
chr17 28019249 28019528 JUND UCSC Txn Factor no Conserved 108247426
chr17 28019217 28019231 RXRB JASPAR yes 21215973
chr17 28019217 28019231 RXRB JASPAR yes 53749612
chr17 28019225 28019228 MYB TRANSFAC yes 21215974
chr17 28019225 28019228 MYB TRANSFAC yes 53749613
chr17 28019236 28019252 SOX8 JASPAR yes 21215975
chr17 28019236 28019252 SOX8 JASPAR yes 53749614
chr17 28019256 28019260 YY1 TRANSFAC yes 21215976
chr17 28019256 28019260 YY1 TRANSFAC yes 53749615
chr17 28019267 28019270 MYB TRANSFAC yes 21215977
chr17 28019267 28019270 MYB TRANSFAC yes 53749616
chr17 28019267 28019282 FOXP1 JASPAR yes 21215978
chr17 28019267 28019282 FOXP1 JASPAR yes 53749617
chr17 28019272 28019284 IRF1 JASPAR yes 21215979
chr17 28019272 28019284 IRF1 JASPAR yes 53749618
chr17 28019284 28019290 TCF4 TRANSFAC yes 21215980
chr17 28019284 28019290 TCF4 TRANSFAC yes 53749619
chr17 28019326 28019336 NOTO JASPAR yes 21215981
chr17 28019326 28019336 NOTO JASPAR yes 53749620
chr17 28019336 28019347 ESRRB JASPAR yes 21215982
chr17 28019336 28019347 ESRRB JASPAR yes 53749621
chr17 28019351 28019362 BATF JASPAR yes 21215983
chr17 28019351 28019362 BATF JASPAR yes 53749622
chr17 28019353 28019364 FOS JASPAR yes 21215984
chr17 28019353 28019364 FOSL1 JASPAR yes 21215985
chr17 28019353 28019364 NFE2 JASPAR yes 21215986
chr17 28019353 28019364 FOS JASPAR yes 53749623
chr17 28019353 28019364 FOSL1 JASPAR yes 53749624
chr17 28019353 28019364 NFE2 JASPAR yes 53749625
chr17 28019354 28019363 JDP2 JASPAR yes 21215987
chr17 28019354 28019363 JDP2 JASPAR yes 53749626
chr17 28019354 28019365 JUNB JASPAR yes 21215988
chr17 28019354 28019365 JUNB JASPAR yes 53749627
chr17 28019354 28019368 JUN JASPAR yes 21215989
chr17 28019354 28019368 JUN JASPAR yes 53749628
chr17 28019355 28019366 BATF JASPAR yes 21215990
chr17 28019355 28019366 BATF JASPAR yes 53749629
chr17 28019360 28019364 YY1 TRANSFAC yes 21215991
chr17 28019360 28019364 YY1 TRANSFAC yes 53749630
chr17 28019368 28019382 JUN JASPAR yes 21215992
chr17 28019368 28019382 JUN JASPAR yes 53749631
chr17 28019370 28019381 BATF JASPAR yes 21215993
chr17 28019370 28019381 BATF JASPAR yes 53749632
chr17 28019371 28019382 FOSL2 JASPAR yes 21215994
chr17 28019371 28019382 JUNB JASPAR yes 21215995
chr17 28019371 28019382 FOSL2 JASPAR yes 53749633
chr17 28019371 28019382 JUNB JASPAR yes 53749634
chr17 28019372 28019383 FOS JASPAR yes 21215996
chr17 28019372 28019383 FOSL1 JASPAR yes 21215997
chr17 28019372 28019383 JUND JASPAR yes 21215998
chr17 28019372 28019383 NFE2 JASPAR yes 21215999
chr17 28019372 28019383 FOS JASPAR yes 53749635
chr17 28019372 28019383 FOSL1 JASPAR yes 53749636
chr17 28019372 28019383 JUND JASPAR yes 53749637
chr17 28019372 28019383 NFE2 JASPAR yes 53749638
chr17 28019373 28019382 JDP2 JASPAR yes 21216000
chr17 28019373 28019382 JDP2 JASPAR yes 53749639
chr17 28019373 28019384 FOSL2 JASPAR yes 21216001
chr17 28019373 28019384 JUNB JASPAR yes 21216002
chr17 28019373 28019384 FOSL2 JASPAR yes 53749640
chr17 28019373 28019384 JUNB JASPAR yes 53749641
chr17 28019373 28019387 JUN JASPAR yes 21216003
chr17 28019373 28019387 JUN JASPAR yes 53749642
chr17 28019396 28019406 MEOX2 JASPAR yes 21216004
chr17 28019396 28019406 MEOX2 JASPAR yes 53749643
chr17 28019415 28019418 MYB TRANSFAC yes 21216005
chr17 28019415 28019418 MYB TRANSFAC yes 53749644
chr17 28019425 28019438 ZBTB18 JASPAR yes 21216006
chr17 28019425 28019438 ZBTB18 JASPAR yes 53749645
chr17 28019429 28019444 MYBL2 JASPAR yes 21216007
chr17 28019429 28019444 MYBL2 JASPAR yes 53749646
chr17 28019444 28019458 RXRB JASPAR yes 21216008
chr17 28019444 28019458 RXRB JASPAR yes 53749647
chr17 28019447 28019451 YY1 TRANSFAC yes 21216009
chr17 28019447 28019451 YY1 TRANSFAC yes 53749648
chr17 28019450 28019465 HNF4A JASPAR yes 21216010
chr17 28019450 28019465 HNF4A JASPAR yes 53749649
chr17 28019451 28019465 NR2F1 JASPAR yes 21216011
chr17 28019451 28019465 RXRB JASPAR yes 21216012
chr17 28019451 28019465 RXRG JASPAR yes 21216013
chr17 28019451 28019465 NR2F1 JASPAR yes 53749650
chr17 28019451 28019465 RXRB JASPAR yes 53749651
chr17 28019451 28019465 RXRG JASPAR yes 53749652
chr17 28019451 28019466 HNF4G JASPAR yes 21216014
chr17 28019451 28019466 HNF4G JASPAR yes 53749653
SNP sites on vista24350[chr17:28019224-28019454]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 28019293 rs3115099 T C
FOS JUN JUND
4817828
chr17 28019440 rs117917832 C T
FOS JUN JUND MYBL2
4817829
Genes possibly regulated by vista24350[chr17:28019224-28019454]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27900487 27921072 - GIT1 ENSG00000108262.11 27921072 0.72 1.0 15602 1848
chr17 27941774 27949925 - CORO6 ENSG00000167549.14 27949925 0.94 1.0 15604 30701
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24350[chr17:28019224-28019454]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results