EnhancerDB
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  3. vista24367[chr17:28431711-28432027]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24367[chr17:28431711-28432027]
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Tissue distribution of vista24367
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Transcription factor that possibly regulate vista24367[chr17:28431711-28432027]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 28431458 28431904 CTCF UCSC Txn Factor no Conserved 108248309
chr17 28431573 28431867 SMC3 UCSC Txn Factor no Conserved 108248324
chr17 28431574 28431838 RAD21 UCSC Txn Factor no Conserved 108248325
chr17 28431668 28432218 GATA2 UCSC Txn Factor no Conserved 108248350
chr17 28431695 28432029 CEBPB UCSC Txn Factor no Conserved 108248356
chr17 28431876 28432074 BHLHE40 UCSC Txn Factor no Conserved 108248376
chr17 28431707 28431721 PAX6 JASPAR yes 21216932
chr17 28431707 28431721 PAX6 JASPAR yes 53781452
chr17 28431722 28431741 REST JASPAR yes 21216933
chr17 28431722 28431741 REST JASPAR yes 53781453
chr17 28431745 28431755 POU6F2 JASPAR yes 21216934
chr17 28431745 28431755 POU6F2 JASPAR yes 53781454
chr17 28431746 28431756 NOTO JASPAR yes 21216935
chr17 28431746 28431756 NOTO JASPAR yes 53781455
chr17 28431749 28431753 YY1 TRANSFAC yes 21216936
chr17 28431749 28431753 YY1 TRANSFAC yes 53781456
chr17 28431753 28431760 SPIB JASPAR yes 21216937
chr17 28431753 28431760 SPIB JASPAR yes 53781457
chr17 28431771 28431782 HOXC11 JASPAR yes 21216938
chr17 28431771 28431782 HOXC12 JASPAR yes 21216939
chr17 28431771 28431782 HOXC11 JASPAR yes 53781458
chr17 28431771 28431782 HOXC12 JASPAR yes 53781459
chr17 28431772 28431784 MYBL1 JASPAR yes 21216940
chr17 28431772 28431784 MYBL1 JASPAR yes 53781460
chr17 28431777 28431780 MYB TRANSFAC yes 21216941
chr17 28431777 28431780 MYB TRANSFAC yes 53781461
chr17 28431785 28431798 ZBTB18 JASPAR yes 21216942
chr17 28431785 28431798 ZBTB18 JASPAR yes 53781462
chr17 28431794 28431815 IRF1 JASPAR yes 21216943
chr17 28431794 28431815 IRF1 JASPAR yes 53781463
chr17 28431798 28431812 STAT1 JASPAR yes 21216944
chr17 28431798 28431812 STAT1 JASPAR yes 53781464
chr17 28431800 28431821 IRF1 JASPAR yes 21216945
chr17 28431800 28431821 IRF1 JASPAR yes 53781465
chr17 28431804 28431818 SPI1 JASPAR yes 21216946
chr17 28431804 28431818 STAT1 JASPAR yes 21216947
chr17 28431804 28431818 SPI1 JASPAR yes 53781466
chr17 28431804 28431818 STAT1 JASPAR yes 53781467
chr17 28431804 28431819 STAT2 JASPAR yes 21216948
chr17 28431804 28431819 STAT2 JASPAR yes 53781468
chr17 28431811 28431823 ZBTB7C JASPAR yes 21216949
chr17 28431811 28431823 ZBTB7C JASPAR yes 53781469
chr17 28431816 28431821 MYC TRANSFAC yes 21216950
chr17 28431816 28431821 MYC TRANSFAC yes 53781470
chr17 28431819 28431829 SMAD3 JASPAR yes 21216951
chr17 28431819 28431829 SMAD3 JASPAR yes 53781471
chr17 28431841 28431845 NFE TRANSFAC yes 21216952
chr17 28431841 28431845 NFE TRANSFAC yes 53781472
chr17 28431848 28431857 SRY JASPAR yes 21216953
chr17 28431848 28431857 SRY JASPAR yes 53781473
chr17 28431850 28431853 MYB TRANSFAC yes 21216954
chr17 28431850 28431853 MYB TRANSFAC yes 53781474
chr17 28431856 28431859 MYB TRANSFAC yes 21216955
chr17 28431856 28431859 MYB TRANSFAC yes 53781475
chr17 28431857 28431870 ELF1 JASPAR yes 21216956
chr17 28431857 28431870 ELF1 JASPAR yes 53781476
chr17 28431859 28431870 ETV2 JASPAR yes 21216957
chr17 28431859 28431870 ETV2 JASPAR yes 53781477
chr17 28431860 28431870 ERF JASPAR yes 21216958
chr17 28431860 28431870 ERG JASPAR yes 21216959
chr17 28431860 28431870 ETS1 JASPAR yes 21216960
chr17 28431860 28431870 FEV JASPAR yes 21216961
chr17 28431860 28431870 FLI1 JASPAR yes 21216962
chr17 28431860 28431870 ERF JASPAR yes 53781478
chr17 28431860 28431870 ERG JASPAR yes 53781479
chr17 28431860 28431870 ETS1 JASPAR yes 53781480
chr17 28431860 28431870 FEV JASPAR yes 53781481
chr17 28431860 28431870 FLI1 JASPAR yes 53781482
chr17 28431860 28431871 FLI1 JASPAR yes 21216963
chr17 28431860 28431871 FLI1 JASPAR yes 53781483
chr17 28431861 28431869 FEV JASPAR yes 21216964
chr17 28431861 28431869 FEV JASPAR yes 53781484
chr17 28431869 28431884 SCRT1 JASPAR yes 21216965
chr17 28431869 28431884 SCRT1 JASPAR yes 53781485
chr17 28431882 28431895 SMAD2 JASPAR yes 21216966
chr17 28431882 28431895 SMAD2 JASPAR yes 53781486
chr17 28431922 28431928 JUN TRANSFAC yes 21216967
chr17 28431922 28431928 JUN TRANSFAC yes 53781487
chr17 28431936 28431942 YY1 JASPAR yes 21216968
chr17 28431936 28431942 YY1 JASPAR yes 53781488
chr17 28431979 28431984 MYC TRANSFAC yes 21216969
chr17 28431979 28431984 USF1 TRANSFAC yes 21216970
chr17 28431979 28431984 USF2 TRANSFAC yes 21216971
chr17 28431979 28431984 MYC TRANSFAC yes 53781489
chr17 28431979 28431984 USF1 TRANSFAC yes 53781490
chr17 28431979 28431984 USF2 TRANSFAC yes 53781491
chr17 28431979 28431986 USF1 JASPAR yes 21216972
chr17 28431979 28431986 USF1 JASPAR yes 53781492
chr17 28431982 28431988 ZNF354C JASPAR yes 21216973
chr17 28431982 28431988 ZNF354C JASPAR yes 53781493
chr17 28431990 28431998 GATA1 TRANSFAC yes 21216974
chr17 28431990 28431998 GATA1 TRANSFAC yes 53781494
chr17 28431990 28432004 GATA2 JASPAR yes 21216975
chr17 28431990 28432004 GATA2 JASPAR yes 53781495
chr17 28431992 28432000 GATA3 JASPAR yes 21216976
chr17 28431992 28432000 GATA5 JASPAR yes 21216977
chr17 28431992 28432000 GATA3 JASPAR yes 53781496
chr17 28431992 28432000 GATA5 JASPAR yes 53781497
chr17 28431996 28432011 AR JASPAR yes 21216978
chr17 28431996 28432011 AR JASPAR yes 53781498
chr17 28432003 28432018 NR2C2 JASPAR yes 21216979
chr17 28432003 28432018 NR2C2 JASPAR yes 53781499
chr17 28432006 28432018 INSM1 JASPAR yes 21216980
chr17 28432006 28432018 PKNOX1 JASPAR yes 21216981
chr17 28432006 28432018 TGIF1 JASPAR yes 21216982
chr17 28432006 28432018 TGIF2 JASPAR yes 21216983
chr17 28432006 28432018 INSM1 JASPAR yes 53781500
chr17 28432006 28432018 PKNOX1 JASPAR yes 53781501
chr17 28432006 28432018 TGIF1 JASPAR yes 53781502
chr17 28432006 28432018 TGIF2 JASPAR yes 53781503
chr17 28432009 28432022 NR2F1 JASPAR yes 21216984
chr17 28432009 28432022 NR2F1 JASPAR yes 53781504
chr17 28432010 28432025 LEF1 JASPAR yes 21216985
chr17 28432010 28432025 LEF1 JASPAR yes 53781505
chr17 28432013 28432017 ESR1 TRANSFAC yes 21216986
chr17 28432013 28432017 ESR1 TRANSFAC yes 53781506
chr17 28432018 28432023 ETS2 TRANSFAC yes 21216987
chr17 28432018 28432023 ETS2 TRANSFAC yes 53781507
SNP sites on vista24367[chr17:28431711-28432027]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 28431732 rs145625306 A C
CEBPB CTCF GATA2 RAD21 REST SMC3
4819641
chr17 28431788 rs73987688 A G
CEBPB CTCF GATA2 RAD21 SMC3 ZBTB18
4819642
chr17 28431880 rs530756250 G A
BHLHE40 CEBPB CTCF GATA2 SCRT1
4819643
chr17 28432007 rs372322217 T C
AR BHLHE40 CEBPB GATA2 INSM1 NR2C2 PKNOX1 TGIF1 TGIF2
4819644
Genes possibly regulated by vista24367[chr17:28431711-28432027]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 28442539 28513493 + NSRP1 ENSG00000126653.11 28442539 0.6 0.99 15607 89488
Expression level of Genes
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miRNAs possibly regulated by vista24367[chr17:28431711-28432027]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results