EnhancerDB
  1. Home
  2. Enhancers
  3. vista24369[chr17:28535067-28535437]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24369[chr17:28535067-28535437]
Back to top
Tissue distribution of vista24369
Back to top
Transcription factor that possibly regulate vista24369[chr17:28535067-28535437]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 28535204 28535617 RUNX3 UCSC Txn Factor no Conserved 108248439
chr17 28535219 28535585 NFIC UCSC Txn Factor no Conserved 108248441
chr17 28535311 28535560 SPI1 UCSC Txn Factor no Conserved 108248451
chr17 28535089 28535093 YY1 TRANSFAC yes 21217077
chr17 28535091 28535101 HOXA13 JASPAR yes 21217078
chr17 28535091 28535101 HOXB13 JASPAR yes 21217079
chr17 28535091 28535101 HOXD13 JASPAR yes 21217080
chr17 28535092 28535101 CDX1 JASPAR yes 21217081
chr17 28535092 28535103 CDX2 JASPAR yes 21217082
chr17 28535122 28535133 E2F6 JASPAR yes 21217083
chr17 28535123 28535128 SP1 TRANSFAC yes 21217084
chr17 28535135 28535144 HIC2 JASPAR yes 21217085
chr17 28535138 28535142 LFA1 TRANSFAC yes 21217086
chr17 28535161 28535165 YY1 TRANSFAC yes 21217087
chr17 28535175 28535184 HIC2 JASPAR yes 21217088
chr17 28535178 28535182 LFA1 TRANSFAC yes 21217089
chr17 28535181 28535192 STAT3 JASPAR yes 21217090
chr17 28535186 28535191 ETS2 TRANSFAC yes 21217091
chr17 28535223 28535231 EHF JASPAR yes 21217092
chr17 28535243 28535248 GATA1 TRANSFAC yes 21217093
chr17 28535249 28535254 H4TF1 TRANSFAC yes 21217094
chr17 28535255 28535264 SRY JASPAR yes 21217095
chr17 28535263 28535267 TEAD2 TRANSFAC yes 21217096
chr17 28535263 28535268 TBP TRANSFAC yes 21217097
chr17 28535263 28535269 TFIID TRANSFAC yes 21217098
chr17 28535270 28535275 MYC TRANSFAC yes 21217099
chr17 28535301 28535314 SMAD2 JASPAR yes 21217100
chr17 28535327 28535343 SOX4 JASPAR yes 21217101
chr17 28535327 28535343 SOX8 JASPAR yes 21217102
chr17 28535345 28535360 HNF1A JASPAR yes 21217103
chr17 28535346 28535359 HNF1B JASPAR yes 21217104
chr17 28535355 28535358 MYB TRANSFAC yes 21217105
chr17 28535355 28535364 RUNX2 JASPAR yes 21217106
chr17 28535355 28535365 RUNX3 JASPAR yes 21217107
chr17 28535355 28535366 RUNX1 JASPAR yes 21217108
chr17 28535387 28535402 HNF4G JASPAR yes 21217109
chr17 28535387 28535402 LEF1 JASPAR yes 21217110
chr17 28535388 28535403 HNF4A JASPAR yes 21217111
chr17 28535402 28535414 MEF2B JASPAR yes 21217112
chr17 28535404 28535408 TEAD2 TRANSFAC yes 21217113
chr17 28535404 28535409 TBP TRANSFAC yes 21217114
chr17 28535404 28535410 TFIID TRANSFAC yes 21217115
chr17 28535413 28535416 MYB TRANSFAC yes 21217116
chr17 28535421 28535426 ETS2 TRANSFAC yes 21217117
chr17 28535421 28535429 FEV JASPAR yes 21217118
chr17 28535422 28535429 SPI1 JASPAR yes 21217119
SNP sites on vista24369[chr17:28535067-28535437]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista24369[chr17:28535067-28535437]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 28442539 28513493 + NSRP1 ENSG00000126653.11 28442539 0.6 0.99 15607 7472
chr17 28521337 28563020 - SLC6A4 ENSG00000108576.5 28563020 0.96 0.95 15608 72417
chr17 28575218 28619074 - BLMH ENSG00000108578.10 28619074 0.72 0.99 15609 16363
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24369[chr17:28535067-28535437]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results