EnhancerDB
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  3. vista24370[chr17:28572073-28572289]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24370[chr17:28572073-28572289]
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Tissue distribution of vista24370
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Transcription factor that possibly regulate vista24370[chr17:28572073-28572289]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 28572088 28572108 TP63 JASPAR yes 21217120
chr17 28572088 28572108 TP63 JASPAR yes 53786652
chr17 28572089 28572107 TP53 JASPAR yes 21217121
chr17 28572089 28572107 TP63 JASPAR yes 21217122
chr17 28572089 28572107 TP73 JASPAR yes 21217123
chr17 28572089 28572107 TP53 JASPAR yes 53786653
chr17 28572089 28572107 TP63 JASPAR yes 53786654
chr17 28572089 28572107 TP73 JASPAR yes 53786655
chr17 28572090 28572105 TP53 JASPAR yes 21217124
chr17 28572090 28572105 TP53 JASPAR yes 53786656
chr17 28572091 28572106 TP53 JASPAR yes 21217125
chr17 28572091 28572106 TP53 JASPAR yes 53786657
chr17 28572114 28572129 RUNX2 JASPAR yes 21217126
chr17 28572114 28572129 RUNX2 JASPAR yes 53786658
chr17 28572132 28572143 NFE2 JASPAR yes 21217127
chr17 28572132 28572143 NFE2 JASPAR yes 53786659
chr17 28572133 28572142 JDP2 JASPAR yes 21217128
chr17 28572133 28572142 JDP2 JASPAR yes 53786660
chr17 28572135 28572145 POU6F2 JASPAR yes 21217129
chr17 28572135 28572145 POU6F2 JASPAR yes 53786661
chr17 28572139 28572143 YY1 TRANSFAC yes 21217130
chr17 28572139 28572143 YY1 TRANSFAC yes 53786662
chr17 28572143 28572161 TP53 JASPAR yes 21217131
chr17 28572143 28572161 TP53 JASPAR yes 53786663
chr17 28572145 28572160 TP53 JASPAR yes 21217132
chr17 28572145 28572160 TP53 JASPAR yes 53786664
chr17 28572165 28572185 ESR1 JASPAR yes 21217133
chr17 28572165 28572185 ESR1 JASPAR yes 53786665
chr17 28572168 28572188 PPARG JASPAR yes 21217134
chr17 28572168 28572188 PPARG JASPAR yes 53786666
chr17 28572171 28572175 ESR1 TRANSFAC yes 21217135
chr17 28572171 28572175 ESR1 TRANSFAC yes 53786667
chr17 28572177 28572181 YY1 TRANSFAC yes 21217136
chr17 28572177 28572181 YY1 TRANSFAC yes 53786668
chr17 28572190 28572201 NFKB1 JASPAR yes 21217137
chr17 28572190 28572201 NFKB1 JASPAR yes 53786669
chr17 28572195 28572210 TFAP2A JASPAR yes 21217138
chr17 28572195 28572210 TFAP2C JASPAR yes 21217139
chr17 28572195 28572210 TFAP2A JASPAR yes 53786670
chr17 28572195 28572210 TFAP2C JASPAR yes 53786671
chr17 28572236 28572247 FOS JASPAR yes 21217140
chr17 28572236 28572247 FOSL1 JASPAR yes 21217141
chr17 28572236 28572247 JUND JASPAR yes 21217142
chr17 28572236 28572247 FOS JASPAR yes 53786672
chr17 28572236 28572247 FOSL1 JASPAR yes 53786673
chr17 28572236 28572247 JUND JASPAR yes 53786674
chr17 28572244 28572265 IRF1 JASPAR yes 21217143
chr17 28572244 28572265 IRF1 JASPAR yes 53786675
chr17 28572273 28572294 ZNF263 JASPAR yes 21217144
chr17 28572273 28572294 ZNF263 JASPAR yes 53786676
chr17 28572277 28572281 YY1 TRANSFAC yes 21217145
chr17 28572277 28572281 YY1 TRANSFAC yes 53786677
chr17 28572278 28572286 FEV JASPAR yes 21217146
chr17 28572278 28572286 FEV JASPAR yes 53786678
chr17 28572281 28572295 SPIC JASPAR yes 21217147
chr17 28572281 28572295 SPIC JASPAR yes 53786679
SNP sites on vista24370[chr17:28572073-28572289]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 28572207 rs10656884 C CAG
TFAP2A TFAP2C
4820142
chr17 28572207 rs397945816 C CAG
TFAP2A TFAP2C
4820143
chr17 28572210 rs573763640 T C
TFAP2A TFAP2C
4820144
Genes possibly regulated by vista24370[chr17:28572073-28572289]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 28521337 28563020 - SLC6A4 ENSG00000108576.5 28563020 0.96 0.95 15608 90947
chr17 28575218 28619074 - BLMH ENSG00000108578.10 28619074 0.72 0.99 15609 53215
chr17 28643351 28661077 - TMIGD1 ENSG00000182271.8 28661077 1.0 0.93 15610 11212
Expression level of Genes
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miRNAs possibly regulated by vista24370[chr17:28572073-28572289]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results