EnhancerDB
  1. Home
  2. Enhancers
  3. vista24371[chr17:28672650-28672985]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24371[chr17:28672650-28672985]
Back to top
Tissue distribution of vista24371
Back to top
Transcription factor that possibly regulate vista24371[chr17:28672650-28672985]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 28672750 28673026 JUND UCSC Txn Factor no Conserved 108248568
chr17 28672638 28672656 RARA JASPAR yes 21217148
chr17 28672638 28672656 RARA JASPAR yes 53792619
chr17 28672654 28672657 MYB TRANSFAC yes 21217149
chr17 28672654 28672657 MYB TRANSFAC yes 53792620
chr17 28672654 28672666 INSM1 JASPAR yes 21217150
chr17 28672654 28672666 INSM1 JASPAR yes 53792621
chr17 28672654 28672672 SRF JASPAR yes 21217151
chr17 28672654 28672672 SRF JASPAR yes 53792622
chr17 28672661 28672664 MYB TRANSFAC yes 21217152
chr17 28672661 28672664 MYB TRANSFAC yes 53792623
chr17 28672661 28672673 YY1 JASPAR yes 21217153
chr17 28672661 28672673 YY1 JASPAR yes 53792624
chr17 28672661 28672681 TP63 JASPAR yes 21217154
chr17 28672661 28672681 TP63 JASPAR yes 53792625
chr17 28672662 28672680 TP53 JASPAR yes 21217155
chr17 28672662 28672680 TP53 JASPAR yes 53792626
chr17 28672671 28672675 ESR1 TRANSFAC yes 21217156
chr17 28672671 28672675 ESR1 TRANSFAC yes 53792627
chr17 28672729 28672734 SP1 TRANSFAC yes 21217157
chr17 28672729 28672734 SP1 TRANSFAC yes 53792628
chr17 28672753 28672768 SCRT1 JASPAR yes 21217158
chr17 28672753 28672768 SCRT1 JASPAR yes 53792629
chr17 28672754 28672764 MSC JASPAR yes 21217159
chr17 28672754 28672764 MSC JASPAR yes 53792630
chr17 28672755 28672768 SCRT2 JASPAR yes 21217160
chr17 28672755 28672768 SCRT2 JASPAR yes 53792631
chr17 28672757 28672763 PTF TRANSFAC yes 21217161
chr17 28672757 28672763 PTF TRANSFAC yes 53792632
chr17 28672764 28672769 GATA1 TRANSFAC yes 21217162
chr17 28672764 28672769 GATA1 TRANSFAC yes 53792633
chr17 28672772 28672781 ZEB1 JASPAR yes 21217163
chr17 28672772 28672781 ZEB1 JASPAR yes 53792634
chr17 28672775 28672780 USF2 TRANSFAC yes 21217164
chr17 28672775 28672780 USF2 TRANSFAC yes 53792635
chr17 28672797 28672802 GATA2 JASPAR yes 21217165
chr17 28672797 28672802 GATA2 JASPAR yes 53792636
chr17 28672829 28672833 H1TF2 TRANSFAC yes 21217166
chr17 28672829 28672833 NFE TRANSFAC yes 21217167
chr17 28672829 28672833 SRF TRANSFAC yes 21217168
chr17 28672829 28672833 H1TF2 TRANSFAC yes 53792637
chr17 28672829 28672833 NFE TRANSFAC yes 53792638
chr17 28672829 28672833 SRF TRANSFAC yes 53792639
chr17 28672846 28672859 POU2F2 JASPAR yes 21217169
chr17 28672846 28672859 POU2F2 JASPAR yes 53792640
chr17 28672875 28672891 SRF JASPAR yes 21217170
chr17 28672875 28672891 SRF JASPAR yes 53792641
chr17 28672880 28672892 SRF JASPAR yes 21217171
chr17 28672880 28672892 SRF JASPAR yes 53792642
chr17 28672895 28672909 JUN JASPAR yes 21217172
chr17 28672895 28672909 JUN JASPAR yes 53792643
chr17 28672898 28672909 FOSL2 JASPAR yes 21217173
chr17 28672898 28672909 JUNB JASPAR yes 21217174
chr17 28672898 28672909 FOSL2 JASPAR yes 53792644
chr17 28672898 28672909 JUNB JASPAR yes 53792645
chr17 28672899 28672910 FOS JASPAR yes 21217175
chr17 28672899 28672910 FOSL1 JASPAR yes 21217176
chr17 28672899 28672910 JUND JASPAR yes 21217177
chr17 28672899 28672910 NFE2 JASPAR yes 21217178
chr17 28672899 28672910 FOS JASPAR yes 53792646
chr17 28672899 28672910 FOSL1 JASPAR yes 53792647
chr17 28672899 28672910 JUND JASPAR yes 53792648
chr17 28672899 28672910 NFE2 JASPAR yes 53792649
chr17 28672900 28672907 JUN TRANSFAC yes 21217179
chr17 28672900 28672907 JUN TRANSFAC yes 53792650
chr17 28672900 28672909 JDP2 JASPAR yes 21217180
chr17 28672900 28672909 JDP2 JASPAR yes 53792651
chr17 28672900 28672911 FOSL2 JASPAR yes 21217181
chr17 28672900 28672911 JUNB JASPAR yes 21217182
chr17 28672900 28672911 FOSL2 JASPAR yes 53792652
chr17 28672900 28672911 JUNB JASPAR yes 53792653
chr17 28672900 28672914 JUN JASPAR yes 21217183
chr17 28672900 28672914 JUN JASPAR yes 53792654
chr17 28672901 28672912 BATF JASPAR yes 21217184
chr17 28672901 28672912 BATF JASPAR yes 53792655
chr17 28672906 28672910 YY1 TRANSFAC yes 21217185
chr17 28672906 28672910 YY1 TRANSFAC yes 53792656
chr17 28672920 28672934 SPIC JASPAR yes 21217186
chr17 28672920 28672934 SPIC JASPAR yes 53792657
chr17 28672923 28672938 NR2C2 JASPAR yes 21217187
chr17 28672923 28672938 NR2C2 JASPAR yes 53792658
chr17 28672926 28672930 LFA1 TRANSFAC yes 21217188
chr17 28672926 28672930 LFA1 TRANSFAC yes 53792659
chr17 28672942 28672946 NFE TRANSFAC yes 21217189
chr17 28672942 28672946 NFE TRANSFAC yes 53792660
chr17 28672954 28672965 RUNX1 JASPAR yes 21217190
chr17 28672954 28672965 RUNX1 JASPAR yes 53792661
chr17 28672970 28672985 FOXP1 JASPAR yes 21217191
chr17 28672970 28672985 FOXP1 JASPAR yes 53792662
chr17 28672971 28672982 FOXP2 JASPAR yes 21217192
chr17 28672971 28672982 FOXP2 JASPAR yes 53792663
chr17 28672973 28672984 FOXA1 JASPAR yes 21217193
chr17 28672973 28672984 FOXA1 JASPAR yes 53792664
SNP sites on vista24371[chr17:28672650-28672985]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 28672658 rs183581719 C T
INSM1 SRF
4820692
chr17 28672660 rs557118647 C T
INSM1 SRF
4820693
chr17 28672885 rs8071110 A G
JUND SRF
4820694
chr17 28672920 rs113385866 T C
JUND SPIC
4820695
chr17 28672940 rs534403386 G A
JUND
4820696
chr17 28672945 rs73275797 A G
JUND NFE
4820697
Genes possibly regulated by vista24371[chr17:28672650-28672985]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 28575218 28619074 - BLMH ENSG00000108578.10 28619074 0.72 0.99 15609 46424
chr17 28643351 28661077 - TMIGD1 ENSG00000182271.8 28661077 1.0 0.93 15610 88427
chr17 28705923 28797007 + CPD ENSG00000108582.7 28705923 0.79 0.99 15611 67062
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24371[chr17:28672650-28672985]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results