EnhancerDB
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  3. vista24373[chr17:28690653-28690812]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24373[chr17:28690653-28690812]
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Tissue distribution of vista24373
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Transcription factor that possibly regulate vista24373[chr17:28690653-28690812]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 28690642 28691232 IKZF1 UCSC Txn Factor no Conserved 108248581
chr17 28690651 28690902 SPI1 UCSC Txn Factor no Conserved 108248583
chr17 28690671 28691228 RUNX3 UCSC Txn Factor no Conserved 108248585
chr17 28690679 28690683 TEAD2 TRANSFAC yes 21217277
chr17 28690679 28690683 TEAD2 TRANSFAC yes 53794195
chr17 28690708 28690719 NFE2L2 JASPAR yes 21217278
chr17 28690708 28690719 NFE2L2 JASPAR yes 53794196
chr17 28690727 28690742 PRDM1 JASPAR yes 21217279
chr17 28690727 28690742 PRDM1 JASPAR yes 53794197
chr17 28690733 28690739 MYC TRANSFAC yes 21217280
chr17 28690733 28690739 MYC TRANSFAC yes 53794198
chr17 28690740 28690755 FOXP1 JASPAR yes 21217281
chr17 28690740 28690755 FOXP1 JASPAR yes 53794199
chr17 28690740 28690761 IRF1 JASPAR yes 21217282
chr17 28690740 28690761 IRF1 JASPAR yes 53794200
chr17 28690743 28690758 FOXP1 JASPAR yes 21217283
chr17 28690743 28690758 FOXP1 JASPAR yes 53794201
chr17 28690744 28690759 FOXP1 JASPAR yes 21217284
chr17 28690744 28690759 FOXP1 JASPAR yes 53794202
chr17 28690744 28690765 IRF1 JASPAR yes 21217285
chr17 28690744 28690765 IRF1 JASPAR yes 53794203
chr17 28690745 28690760 FOXP1 JASPAR yes 21217286
chr17 28690745 28690760 FOXP1 JASPAR yes 53794204
chr17 28690745 28690766 IRF1 JASPAR yes 21217287
chr17 28690745 28690766 IRF1 JASPAR yes 53794205
chr17 28690746 28690761 FOXP1 JASPAR yes 21217288
chr17 28690746 28690761 FOXP1 JASPAR yes 53794206
chr17 28690746 28690767 IRF1 JASPAR yes 21217289
chr17 28690746 28690767 IRF1 JASPAR yes 53794207
chr17 28690747 28690762 FOXP1 JASPAR yes 21217290
chr17 28690747 28690762 FOXP1 JASPAR yes 53794208
chr17 28690747 28690768 IRF1 JASPAR yes 21217291
chr17 28690747 28690768 IRF1 JASPAR yes 53794209
chr17 28690748 28690763 FOXP1 JASPAR yes 21217292
chr17 28690748 28690763 FOXP1 JASPAR yes 53794210
chr17 28690748 28690769 IRF1 JASPAR yes 21217293
chr17 28690748 28690769 IRF1 JASPAR yes 53794211
chr17 28690749 28690764 FOXP1 JASPAR yes 21217294
chr17 28690749 28690764 FOXP1 JASPAR yes 53794212
chr17 28690750 28690765 FOXP1 JASPAR yes 21217295
chr17 28690750 28690765 FOXP1 JASPAR yes 53794213
chr17 28690752 28690773 IRF1 JASPAR yes 21217296
chr17 28690752 28690773 IRF1 JASPAR yes 53794214
chr17 28690756 28690770 SPI1 JASPAR yes 21217297
chr17 28690756 28690770 SPIC JASPAR yes 21217298
chr17 28690756 28690770 SPI1 JASPAR yes 53794215
chr17 28690756 28690770 SPIC JASPAR yes 53794216
chr17 28690757 28690770 ELF1 JASPAR yes 21217299
chr17 28690757 28690770 ELF1 JASPAR yes 53794217
chr17 28690758 28690770 EHF JASPAR yes 21217300
chr17 28690758 28690770 EHF JASPAR yes 53794218
chr17 28690758 28690771 ELF3 JASPAR yes 21217301
chr17 28690758 28690771 ELF3 JASPAR yes 53794219
chr17 28690759 28690770 ELF5 JASPAR yes 21217302
chr17 28690759 28690770 ELF5 JASPAR yes 53794220
chr17 28690760 28690770 GABPA JASPAR yes 21217303
chr17 28690760 28690770 GABPA JASPAR yes 53794221
chr17 28690760 28690771 FLI1 JASPAR yes 21217304
chr17 28690760 28690771 FLI1 JASPAR yes 53794222
chr17 28690761 28690766 ETS2 TRANSFAC yes 21217305
chr17 28690761 28690766 ETS2 TRANSFAC yes 53794223
chr17 28690761 28690769 FEV JASPAR yes 21217306
chr17 28690761 28690769 FEV JASPAR yes 53794224
chr17 28690762 28690769 SPI1 JASPAR yes 21217307
chr17 28690762 28690769 SPI1 JASPAR yes 53794225
chr17 28690769 28690773 LFA1 TRANSFAC yes 21217308
chr17 28690769 28690773 LFA1 TRANSFAC yes 53794226
chr17 28690803 28690813 SREBF1 JASPAR yes 21217309
chr17 28690803 28690813 SREBF2 JASPAR yes 21217310
chr17 28690803 28690813 SREBF1 JASPAR yes 53794227
chr17 28690803 28690813 SREBF2 JASPAR yes 53794228
SNP sites on vista24373[chr17:28690653-28690812]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 28690726 rs573430105 T C
IKZF1 RUNX3 SPI1
4820824
chr17 28690748 rs9904829 A G
FOXP1 IKZF1 IRF1 RUNX3 SPI1
4820825
Genes possibly regulated by vista24373[chr17:28690653-28690812]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 28575218 28619074 - BLMH ENSG00000108578.10 28619074 0.72 0.99 15609 28421
chr17 28643351 28661077 - TMIGD1 ENSG00000182271.8 28661077 1.0 0.93 15610 70424
chr17 28705923 28797007 + CPD ENSG00000108582.7 28705923 0.79 0.99 15611 84889
Expression level of Genes
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miRNAs possibly regulated by vista24373[chr17:28690653-28690812]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results