EnhancerDB
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  3. vista24375[chr17:28878844-28878974]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24375[chr17:28878844-28878974]
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Tissue distribution of vista24375
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Transcription factor that possibly regulate vista24375[chr17:28878844-28878974]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 28878844 28878859 TFAP2C JASPAR yes 21217363
chr17 28878846 28878861 TFAP2A JASPAR yes 21217364
chr17 28878846 28878861 TFAP2C JASPAR yes 21217365
chr17 28878847 28878858 TFAP2A JASPAR yes 21217366
chr17 28878847 28878858 TFAP2B JASPAR yes 21217367
chr17 28878847 28878858 TFAP2C JASPAR yes 21217368
chr17 28878858 28878864 ZNF354C JASPAR yes 21217369
chr17 28878860 28878865 GATA2 JASPAR yes 21217370
chr17 28878865 28878872 JUN TRANSFAC yes 21217371
chr17 28878872 28878889 ESR1 JASPAR yes 21217372
chr17 28878872 28878890 ESR1 JASPAR yes 21217373
chr17 28878873 28878888 ESR2 JASPAR yes 21217374
chr17 28878873 28878893 ESR1 JASPAR yes 21217375
chr17 28878888 28878892 LFA1 TRANSFAC yes 21217376
chr17 28878912 28878925 NR2F1 JASPAR yes 21217377
chr17 28878915 28878928 JUN JASPAR yes 21217378
chr17 28878916 28878924 CREB1 JASPAR yes 21217379
chr17 28878916 28878933 RARA JASPAR yes 21217380
chr17 28878941 28878951 ID4 JASPAR yes 21217381
chr17 28878941 28878951 NHLH1 JASPAR yes 21217382
chr17 28878941 28878951 TCF3 JASPAR yes 21217383
chr17 28878941 28878951 TCF4 JASPAR yes 21217384
chr17 28878942 28878951 SNAI2 JASPAR yes 21217385
chr17 28878943 28878948 USF2 TRANSFAC yes 21217386
SNP sites on vista24375[chr17:28878844-28878974]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 28878958 rs548420371 C T no 4821570
chr17 28878966 rs73987947 C T no 4821571
Genes possibly regulated by vista24375[chr17:28878844-28878974]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 28804380 28854610 + GOSR1 ENSG00000108587.10 28804380 0.67 1.0 15612 25536
chr17 28884130 28890511 + TBC1D29 ENSG00000266733.1 28884130 0.79 1.0 15613 94844
Expression level of Genes
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miRNAs possibly regulated by vista24375[chr17:28878844-28878974]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results