EnhancerDB
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  3. vista24376[chr17:28928053-28928382]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24376[chr17:28928053-28928382]
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Tissue distribution of vista24376
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Transcription factor that possibly regulate vista24376[chr17:28928053-28928382]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 28927095 28928159 POLR2A UCSC Txn Factor no Conserved 108248694
chr17 28928037 28928058 ZNF263 JASPAR yes 21217387
chr17 28928037 28928058 ZNF263 JASPAR yes 53803073
chr17 28928051 28928059 EHF JASPAR yes 21217388
chr17 28928051 28928059 EHF JASPAR yes 53803074
chr17 28928062 28928079 RXRA JASPAR yes 21217389
chr17 28928062 28928079 RXRA JASPAR yes 53803075
chr17 28928074 28928082 BSX JASPAR yes 21217390
chr17 28928074 28928082 DLX6 JASPAR yes 21217391
chr17 28928074 28928082 MSX1 JASPAR yes 21217392
chr17 28928074 28928082 MSX2 JASPAR yes 21217393
chr17 28928074 28928082 BSX JASPAR yes 53803076
chr17 28928074 28928082 DLX6 JASPAR yes 53803077
chr17 28928074 28928082 MSX1 JASPAR yes 53803078
chr17 28928074 28928082 MSX2 JASPAR yes 53803079
chr17 28928080 28928090 RELA JASPAR yes 21217394
chr17 28928080 28928090 REL JASPAR yes 21217395
chr17 28928080 28928090 RELA JASPAR yes 53803080
chr17 28928080 28928090 REL JASPAR yes 53803081
chr17 28928134 28928144 SP1 JASPAR yes 21217396
chr17 28928134 28928144 SP1 JASPAR yes 53803082
chr17 28928135 28928145 SP1 JASPAR yes 21217397
chr17 28928135 28928145 SP1 JASPAR yes 53803083
chr17 28928136 28928141 SP1 TRANSFAC yes 21217398
chr17 28928136 28928141 SP1 TRANSFAC yes 53803084
chr17 28928137 28928142 SP1 TRANSFAC yes 21217399
chr17 28928137 28928142 SP1 TRANSFAC yes 53803085
chr17 28928137 28928143 SP1 TRANSFAC yes 21217400
chr17 28928137 28928143 SP1 TRANSFAC yes 53803086
chr17 28928142 28928162 RREB1 JASPAR yes 21217401
chr17 28928142 28928162 RREB1 JASPAR yes 53803087
chr17 28928163 28928168 GATA2 JASPAR yes 21217402
chr17 28928163 28928168 GATA2 JASPAR yes 53803088
chr17 28928188 28928193 H4TF1 TRANSFAC yes 21217403
chr17 28928188 28928193 H4TF1 TRANSFAC yes 53803089
chr17 28928209 28928213 ESR1 TRANSFAC yes 21217404
chr17 28928209 28928213 ESR1 TRANSFAC yes 53803090
chr17 28928227 28928240 TFAP2B JASPAR yes 21217405
chr17 28928227 28928240 TFAP2C JASPAR yes 21217406
chr17 28928227 28928240 TFAP2B JASPAR yes 53803091
chr17 28928227 28928240 TFAP2C JASPAR yes 53803092
chr17 28928249 28928264 TFAP2A JASPAR yes 21217407
chr17 28928249 28928264 TFAP2C JASPAR yes 21217408
chr17 28928249 28928264 TFAP2A JASPAR yes 53803093
chr17 28928249 28928264 TFAP2C JASPAR yes 53803094
chr17 28928252 28928264 TFAP2C JASPAR yes 21217409
chr17 28928252 28928264 TFAP2C JASPAR yes 53803095
chr17 28928252 28928267 TFAP2A JASPAR yes 21217410
chr17 28928252 28928267 TFAP2A JASPAR yes 53803096
chr17 28928268 28928278 TCF4 JASPAR yes 21217411
chr17 28928268 28928278 TCF4 JASPAR yes 53803097
chr17 28928270 28928279 ZEB1 JASPAR yes 21217412
chr17 28928270 28928279 ZEB1 JASPAR yes 53803098
chr17 28928272 28928277 SP1 TRANSFAC yes 21217413
chr17 28928272 28928277 SP1 TRANSFAC yes 53803099
chr17 28928286 28928296 GSC2 JASPAR yes 21217414
chr17 28928286 28928296 GSC JASPAR yes 21217415
chr17 28928286 28928296 GSC2 JASPAR yes 53803100
chr17 28928286 28928296 GSC JASPAR yes 53803101
chr17 28928287 28928295 RHOXF1 JASPAR yes 21217416
chr17 28928287 28928295 RHOXF1 JASPAR yes 53803102
chr17 28928287 28928296 PITX3 JASPAR yes 21217417
chr17 28928287 28928296 PITX3 JASPAR yes 53803103
chr17 28928293 28928298 MYB TRANSFAC yes 21217418
chr17 28928293 28928298 MYB TRANSFAC yes 53803104
chr17 28928295 28928306 SPDEF JASPAR yes 21217419
chr17 28928295 28928306 SPDEF JASPAR yes 53803105
chr17 28928297 28928307 TFCP2 JASPAR yes 21217420
chr17 28928297 28928307 TFCP2 JASPAR yes 53803106
chr17 28928303 28928317 MTF1 JASPAR yes 21217421
chr17 28928303 28928317 MTF1 JASPAR yes 53803107
chr17 28928315 28928329 FOXF2 JASPAR yes 21217422
chr17 28928315 28928329 FOXF2 JASPAR yes 53803108
chr17 28928318 28928329 FOXP2 JASPAR yes 21217423
chr17 28928318 28928329 FOXP2 JASPAR yes 53803109
chr17 28928320 28928327 FOXD2 JASPAR yes 21217424
chr17 28928320 28928327 FOXI1 JASPAR yes 21217425
chr17 28928320 28928327 FOXL1 JASPAR yes 21217426
chr17 28928320 28928327 FOXO4 JASPAR yes 21217427
chr17 28928320 28928327 FOXO6 JASPAR yes 21217428
chr17 28928320 28928327 FOXP3 JASPAR yes 21217429
chr17 28928320 28928327 FOXD2 JASPAR yes 53803110
chr17 28928320 28928327 FOXI1 JASPAR yes 53803111
chr17 28928320 28928327 FOXL1 JASPAR yes 53803112
chr17 28928320 28928327 FOXO4 JASPAR yes 53803113
chr17 28928320 28928327 FOXO6 JASPAR yes 53803114
chr17 28928320 28928327 FOXP3 JASPAR yes 53803115
chr17 28928320 28928328 FOXD1 JASPAR yes 21217430
chr17 28928320 28928328 FOXG1 JASPAR yes 21217431
chr17 28928320 28928328 FOXO3 JASPAR yes 21217432
chr17 28928320 28928328 FOXD1 JASPAR yes 53803116
chr17 28928320 28928328 FOXG1 JASPAR yes 53803117
chr17 28928320 28928328 FOXO3 JASPAR yes 53803118
chr17 28928347 28928350 MYB TRANSFAC yes 21217433
chr17 28928347 28928350 MYB TRANSFAC yes 53803119
chr17 28928351 28928357 MAZ TRANSFAC yes 21217434
chr17 28928351 28928357 MAZ TRANSFAC yes 53803120
SNP sites on vista24376[chr17:28928053-28928382]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 28928086 rs191375180 G A
POLR2A REL RELA
4821836
chr17 28928114 rs184325376 A G
POLR2A
4821837
chr17 28928140 rs188676733 C T
POLR2A SP1
4821838
chr17 28928142 rs142063447 G A
POLR2A RREB1 SP1
4821839
chr17 28928174 rs181881908 G T no 4821840
chr17 28928182 rs9890961 C A no 4821841
chr17 28928203 rs555801167 A G no 4821842
chr17 28928229 rs542782737 G A
TFAP2B TFAP2C
4821843
chr17 28928309 rs216440 A T
MTF1
4821844
chr17 28928331 rs9891428 C T no 4821845
chr17 28928356 rs528718380 G GGGT
MAZ
4821846
chr17 28928362 rs150734688 A G no 4821847
chr17 28928375 rs9891459 C T no 4821848
Genes possibly regulated by vista24376[chr17:28928053-28928382]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 28884130 28890511 + TBC1D29 ENSG00000266733.1 28884130 0.79 1.0 15613 56077
Expression level of Genes
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miRNAs possibly regulated by vista24376[chr17:28928053-28928382]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results