EnhancerDB
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  3. vista24385[chr17:29334745-29335135]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24385[chr17:29334745-29335135]
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Tissue distribution of vista24385
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Transcription factor that possibly regulate vista24385[chr17:29334745-29335135]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29334736 29334747 PHOX2A JASPAR yes 21217666
chr17 29334736 29334747 PHOX2A JASPAR yes 53816765
chr17 29334742 29334757 FOXP1 JASPAR yes 21217667
chr17 29334742 29334757 FOXP1 JASPAR yes 53816766
chr17 29334742 29334763 IRF1 JASPAR yes 21217668
chr17 29334742 29334763 IRF1 JASPAR yes 53816767
chr17 29334743 29334758 FOXP1 JASPAR yes 21217669
chr17 29334743 29334758 FOXP1 JASPAR yes 53816768
chr17 29334745 29334760 FOXP1 JASPAR yes 21217670
chr17 29334745 29334760 FOXP1 JASPAR yes 53816769
chr17 29334746 29334761 FOXP1 JASPAR yes 21217671
chr17 29334746 29334761 FOXP1 JASPAR yes 53816770
chr17 29334747 29334762 FOXP1 JASPAR yes 21217672
chr17 29334747 29334762 FOXP1 JASPAR yes 53816771
chr17 29334748 29334763 FOXP1 JASPAR yes 21217673
chr17 29334748 29334763 FOXP1 JASPAR yes 53816772
chr17 29334749 29334764 FOXP1 JASPAR yes 21217674
chr17 29334749 29334764 FOXP1 JASPAR yes 53816773
chr17 29334750 29334765 FOXP1 JASPAR yes 21217675
chr17 29334750 29334765 FOXP1 JASPAR yes 53816774
chr17 29334750 29334771 IRF1 JASPAR yes 21217676
chr17 29334750 29334771 IRF1 JASPAR yes 53816775
chr17 29334751 29334766 FOXP1 JASPAR yes 21217677
chr17 29334751 29334766 FOXP1 JASPAR yes 53816776
chr17 29334754 29334769 STAT2 JASPAR yes 21217678
chr17 29334754 29334769 STAT2 JASPAR yes 53816777
chr17 29334774 29334785 HOXA10 JASPAR yes 21217679
chr17 29334774 29334785 HOXA10 JASPAR yes 53816778
chr17 29334775 29334785 HOXB13 JASPAR yes 21217680
chr17 29334775 29334785 HOXD13 JASPAR yes 21217681
chr17 29334775 29334785 HOXB13 JASPAR yes 53816779
chr17 29334775 29334785 HOXD13 JASPAR yes 53816780
chr17 29334790 29334808 NR3C1 JASPAR yes 21217682
chr17 29334790 29334808 NR3C1 JASPAR yes 53816781
chr17 29334802 29334805 MYB TRANSFAC yes 21217683
chr17 29334802 29334805 MYB TRANSFAC yes 53816782
chr17 29334809 29334815 HiNF-A TRANSFAC yes 21217684
chr17 29334809 29334815 HiNF-A TRANSFAC yes 53816783
chr17 29334813 29334831 MAFF JASPAR yes 21217685
chr17 29334813 29334831 MAFF JASPAR yes 53816784
chr17 29334814 29334829 MAFK JASPAR yes 21217686
chr17 29334814 29334829 MAFK JASPAR yes 53816785
chr17 29334823 29334827 YY1 TRANSFAC yes 21217687
chr17 29334823 29334827 YY1 TRANSFAC yes 53816786
chr17 29334827 29334838 STAT3 JASPAR yes 21217688
chr17 29334827 29334838 STAT3 JASPAR yes 53816787
chr17 29334843 29334857 SPI1 JASPAR yes 21217689
chr17 29334843 29334857 SPI1 JASPAR yes 53816788
chr17 29334846 29334861 LEF1 JASPAR yes 21217690
chr17 29334846 29334861 LEF1 JASPAR yes 53816789
chr17 29334847 29334861 GATA2 JASPAR yes 21217691
chr17 29334847 29334861 TCF7L2 JASPAR yes 21217692
chr17 29334847 29334861 GATA2 JASPAR yes 53816790
chr17 29334847 29334861 TCF7L2 JASPAR yes 53816791
chr17 29334851 29334859 GATA3 JASPAR yes 21217693
chr17 29334851 29334859 GATA3 JASPAR yes 53816792
chr17 29334876 29334892 GLIS1 JASPAR yes 21217694
chr17 29334876 29334892 GLIS1 JASPAR yes 53816793
chr17 29334877 29334891 GLIS2 JASPAR yes 21217695
chr17 29334877 29334891 GLIS3 JASPAR yes 21217696
chr17 29334877 29334891 ZIC1 JASPAR yes 21217697
chr17 29334877 29334891 GLIS2 JASPAR yes 53816794
chr17 29334877 29334891 GLIS3 JASPAR yes 53816795
chr17 29334877 29334891 ZIC1 JASPAR yes 53816796
chr17 29334877 29334892 ZIC3 JASPAR yes 21217698
chr17 29334877 29334892 ZIC4 JASPAR yes 21217699
chr17 29334877 29334892 ZIC3 JASPAR yes 53816797
chr17 29334877 29334892 ZIC4 JASPAR yes 53816798
chr17 29334878 29334888 SP1 JASPAR yes 21217700
chr17 29334878 29334888 ZNF740 JASPAR yes 21217701
chr17 29334878 29334888 SP1 JASPAR yes 53816799
chr17 29334878 29334888 ZNF740 JASPAR yes 53816800
chr17 29334879 29334889 ZNF740 JASPAR yes 21217702
chr17 29334879 29334889 ZNF740 JASPAR yes 53816801
chr17 29334888 29334894 ZNF354C JASPAR yes 21217703
chr17 29334888 29334894 ZNF354C JASPAR yes 53816802
chr17 29334890 29334895 GATA2 JASPAR yes 21217704
chr17 29334890 29334895 GATA2 JASPAR yes 53816803
chr17 29334896 29334917 REST JASPAR yes 21217705
chr17 29334896 29334917 REST JASPAR yes 53816804
chr17 29334923 29334931 FOXL1 JASPAR yes 21217706
chr17 29334923 29334931 FOXL1 JASPAR yes 53816805
chr17 29334936 29334942 TCF4 TRANSFAC yes 21217707
chr17 29334936 29334942 TCF4 TRANSFAC yes 53816806
chr17 29334958 29334972 NR2F1 JASPAR yes 21217708
chr17 29334958 29334972 NR2F1 JASPAR yes 53816807
chr17 29334960 29334975 HNF1A JASPAR yes 21217709
chr17 29334960 29334975 HNF1A JASPAR yes 53816808
chr17 29334975 29334979 TEAD2 TRANSFAC yes 21217710
chr17 29334975 29334979 TEAD2 TRANSFAC yes 53816809
chr17 29334975 29334980 TBP TRANSFAC yes 21217711
chr17 29334975 29334980 TBP TRANSFAC yes 53816810
chr17 29334990 29335003 HNF1B JASPAR yes 21217712
chr17 29334990 29335003 HNF1B JASPAR yes 53816811
chr17 29335014 29335018 TEAD2 TRANSFAC yes 21217713
chr17 29335014 29335018 TEAD2 TRANSFAC yes 53816812
chr17 29335016 29335019 MYB TRANSFAC yes 21217714
chr17 29335016 29335019 MYB TRANSFAC yes 53816813
chr17 29335056 29335071 MEF2C JASPAR yes 21217715
chr17 29335056 29335071 MEF2C JASPAR yes 53816814
chr17 29335057 29335072 MEF2A JASPAR yes 21217716
chr17 29335057 29335072 MEF2A JASPAR yes 53816815
chr17 29335058 29335070 MEF2A JASPAR yes 21217717
chr17 29335058 29335070 MEF2B JASPAR yes 21217718
chr17 29335058 29335070 MEF2D JASPAR yes 21217719
chr17 29335058 29335070 MEF2A JASPAR yes 53816816
chr17 29335058 29335070 MEF2B JASPAR yes 53816817
chr17 29335058 29335070 MEF2D JASPAR yes 53816818
chr17 29335059 29335069 MEF2A JASPAR yes 21217720
chr17 29335059 29335069 MEF2A JASPAR yes 53816819
chr17 29335090 29335093 MYB TRANSFAC yes 21217721
chr17 29335090 29335093 MYB TRANSFAC yes 53816820
chr17 29335103 29335108 GATA2 JASPAR yes 21217722
chr17 29335103 29335108 GATA2 JASPAR yes 53816821
SNP sites on vista24385[chr17:29334745-29335135]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29334759 rs201152905 A AC
FOXP1 IRF1 STAT2
4823577
chr17 29334869 rs368863673 C A no 4823578
chr17 29334879 rs111915563 A AC
GLIS1 GLIS2 GLIS3 SP1 ZIC1 ZIC3 ZIC4 ZNF740
4823579
chr17 29334911 rs59830923 C T
REST
4823580
chr17 29335130 rs74742342 G A no 4823581
Genes possibly regulated by vista24385[chr17:29334745-29335135]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29295803 29326929 + RNF135 ENSG00000181481.9 29295803 0.63 0.99 15618 61058
chr17 29421945 29709134 + NF1 ENSG00000196712.12 29421945 0.76 0.98 15619 13190
Expression level of Genes
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miRNAs possibly regulated by vista24385[chr17:29334745-29335135]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 29421376 29421397 - hsa-miR-4733-3p MIMAT0019858 29422507 0.006112483483656001 0.86673 0.0 687
Expression level of miRNAs
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