EnhancerDB
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  3. vista24388[chr17:29599453-29600092]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24388[chr17:29599453-29600092]
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Tissue distribution of vista24388
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Transcription factor that possibly regulate vista24388[chr17:29599453-29600092]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29599465 29599470 NFY TRANSFAC yes 21217875
chr17 29599477 29599481 YY1 TRANSFAC yes 21217876
chr17 29599491 29599504 POU2F2 JASPAR yes 21217877
chr17 29599518 29599522 ESR1 TRANSFAC yes 21217878
chr17 29599532 29599552 TP53 JASPAR yes 21217879
chr17 29599543 29599553 TEAD1 JASPAR yes 21217880
chr17 29599543 29599553 TEAD4 JASPAR yes 21217881
chr17 29599567 29599577 RORA JASPAR yes 21217882
chr17 29599570 29599587 ESR1 JASPAR yes 21217883
chr17 29599571 29599588 RARA JASPAR yes 21217884
chr17 29599572 29599576 ESR1 TRANSFAC yes 21217885
chr17 29599575 29599579 YY1 TRANSFAC yes 21217886
chr17 29599593 29599598 GATA2 JASPAR yes 21217887
chr17 29599601 29599606 NFY TRANSFAC yes 21217888
chr17 29599619 29599624 NFY TRANSFAC yes 21217889
chr17 29599627 29599637 GABPA JASPAR yes 21217890
chr17 29599627 29599640 ELF1 JASPAR yes 21217891
chr17 29599634 29599644 GSC2 JASPAR yes 21217892
chr17 29599634 29599644 GSC JASPAR yes 21217893
chr17 29599635 29599643 OTX1 JASPAR yes 21217894
chr17 29599635 29599644 PITX3 JASPAR yes 21217895
chr17 29599647 29599651 H4TF2 TRANSFAC yes 21217896
chr17 29599673 29599678 NFY TRANSFAC yes 21217897
chr17 29599677 29599682 GATA2 JASPAR yes 21217898
chr17 29599692 29599703 RUNX1 JASPAR yes 21217899
chr17 29599723 29599731 TEAD3 JASPAR yes 21217900
chr17 29599729 29599738 SRY JASPAR yes 21217901
chr17 29599731 29599734 MYB TRANSFAC yes 21217902
chr17 29599731 29599743 FOXI1 JASPAR yes 21217903
chr17 29599744 29599759 NFYB JASPAR yes 21217904
chr17 29599746 29599762 NFYA JASPAR yes 21217905
chr17 29599751 29599755 H1TF2 TRANSFAC yes 21217906
chr17 29599751 29599755 NFE TRANSFAC yes 21217907
chr17 29599751 29599755 SRF TRANSFAC yes 21217908
chr17 29599784 29599795 CEBPB JASPAR yes 21217909
chr17 29599784 29599796 HLF JASPAR yes 21217910
chr17 29599785 29599796 CEBPA JASPAR yes 21217911
chr17 29599792 29599802 MNX1 JASPAR yes 21217912
chr17 29599794 29599805 NFIL3 JASPAR yes 21217913
chr17 29599794 29599805 PHOX2A JASPAR yes 21217914
chr17 29599794 29599805 PROP1 JASPAR yes 21217915
chr17 29599795 29599807 DBP JASPAR yes 21217916
chr17 29599795 29599807 HLF JASPAR yes 21217917
chr17 29599795 29599807 TEF JASPAR yes 21217918
chr17 29599797 29599808 NFIL3 JASPAR yes 21217919
chr17 29599800 29599804 TEAD2 TRANSFAC yes 21217920
chr17 29599806 29599816 ALX3 JASPAR yes 21217921
chr17 29599806 29599816 GSX2 JASPAR yes 21217922
chr17 29599806 29599816 MIXL1 JASPAR yes 21217923
chr17 29599806 29599816 MNX1 JASPAR yes 21217924
chr17 29599807 29599815 ISX JASPAR yes 21217925
chr17 29599807 29599815 LHX9 JASPAR yes 21217926
chr17 29599807 29599815 LMX1B JASPAR yes 21217927
chr17 29599807 29599815 PRRX1 JASPAR yes 21217928
chr17 29599807 29599815 RAX2 JASPAR yes 21217929
chr17 29599807 29599815 SHOX JASPAR yes 21217930
chr17 29599807 29599815 UNCX JASPAR yes 21217931
chr17 29599810 29599815 MYB TRANSFAC yes 21217932
chr17 29599843 29599848 GATA2 JASPAR yes 21217933
chr17 29599848 29599856 BARX1 JASPAR yes 21217934
chr17 29599852 29599866 GATA2 JASPAR yes 21217935
chr17 29599852 29599867 FOXP1 JASPAR yes 21217936
chr17 29599853 29599864 FOXP2 JASPAR yes 21217937
chr17 29599853 29599867 FOXF2 JASPAR yes 21217938
chr17 29599854 29599862 FOXG1 JASPAR yes 21217939
chr17 29599867 29599871 YY1 TRANSFAC yes 21217940
chr17 29599872 29599883 NFIL3 JASPAR yes 21217941
chr17 29599873 29599885 HLF JASPAR yes 21217942
chr17 29599874 29599886 POU2F1 JASPAR yes 21217943
chr17 29599874 29599887 POU3F3 JASPAR yes 21217944
chr17 29599874 29599888 POU1F1 JASPAR yes 21217945
chr17 29599875 29599887 POU3F1 JASPAR yes 21217946
chr17 29599875 29599887 POU3F2 JASPAR yes 21217947
chr17 29599875 29599888 POU2F2 JASPAR yes 21217948
chr17 29599876 29599884 FOXL1 JASPAR yes 21217949
chr17 29599876 29599885 POU3F4 JASPAR yes 21217950
chr17 29599876 29599885 POU5F1B JASPAR yes 21217951
chr17 29599876 29599887 FOXB1 JASPAR yes 21217952
chr17 29599876 29599887 FOXC1 JASPAR yes 21217953
chr17 29599880 29599895 FOXA1 JASPAR yes 21217954
chr17 29599882 29599894 FOXC2 JASPAR yes 21217955
chr17 29599883 29599894 FOXC1 JASPAR yes 21217956
chr17 29599884 29599895 FOXA1 JASPAR yes 21217957
chr17 29599909 29599921 IRF1 JASPAR yes 21217958
chr17 29599917 29599931 STAT1 JASPAR yes 21217959
chr17 29599926 29599940 TCF7L2 JASPAR yes 21217960
chr17 29599929 29599935 LEF1 TRANSFAC yes 21217961
chr17 29599929 29599935 SOX10 JASPAR yes 21217962
chr17 29599937 29599949 TAL1 JASPAR yes 21217963
chr17 29599938 29599951 ZBTB18 JASPAR yes 21217964
chr17 29599939 29599957 MAFF JASPAR yes 21217965
chr17 29599941 29599952 NRL JASPAR yes 21217966
chr17 29599941 29599956 MAFK JASPAR yes 21217967
chr17 29599960 29599964 YY1 TRANSFAC yes 21217968
chr17 29599991 29600000 SRY JASPAR yes 21217969
chr17 29600012 29600033 MAFG JASPAR yes 21217970
chr17 29600018 29600028 EN2 JASPAR yes 21217971
chr17 29600018 29600028 ESX1 JASPAR yes 21217972
chr17 29600018 29600028 GBX1 JASPAR yes 21217973
chr17 29600018 29600028 GBX2 JASPAR yes 21217974
chr17 29600018 29600028 HESX1 JASPAR yes 21217975
chr17 29600018 29600028 LBX2 JASPAR yes 21217976
chr17 29600018 29600028 LHX2 JASPAR yes 21217977
chr17 29600018 29600028 MIXL1 JASPAR yes 21217978
chr17 29600018 29600028 MNX1 JASPAR yes 21217979
chr17 29600018 29600028 RAX JASPAR yes 21217980
chr17 29600019 29600027 BARX1 JASPAR yes 21217981
chr17 29600019 29600027 BSX JASPAR yes 21217982
chr17 29600019 29600027 DLX6 JASPAR yes 21217983
chr17 29600019 29600027 ISX JASPAR yes 21217984
chr17 29600019 29600027 LBX1 JASPAR yes 21217985
chr17 29600019 29600027 LHX9 JASPAR yes 21217986
chr17 29600019 29600027 MSX1 JASPAR yes 21217987
chr17 29600019 29600027 MSX2 JASPAR yes 21217988
chr17 29600019 29600027 NKX6-2 JASPAR yes 21217989
chr17 29600019 29600027 PRRX1 JASPAR yes 21217990
chr17 29600019 29600027 RAX2 JASPAR yes 21217991
chr17 29600019 29600027 SHOX JASPAR yes 21217992
chr17 29600019 29600027 UNCX JASPAR yes 21217993
chr17 29600019 29600033 POU1F1 JASPAR yes 21217994
chr17 29600023 29600029 NFIC JASPAR yes 21217995
chr17 29600027 29600031 YY1 TRANSFAC yes 21217996
chr17 29600031 29600046 MEF2A JASPAR yes 21217997
chr17 29600032 29600047 MEF2C JASPAR yes 21217998
chr17 29600033 29600045 MEF2A JASPAR yes 21217999
chr17 29600033 29600051 SRF JASPAR yes 21218000
chr17 29600034 29600044 MEF2A JASPAR yes 21218001
chr17 29600035 29600039 YY1 TRANSFAC yes 21218002
chr17 29600039 29600045 TBP TRANSFAC yes 21218003
chr17 29600039 29600053 SPIC JASPAR yes 21218004
chr17 29600042 29600057 FOXP1 JASPAR yes 21218005
chr17 29600044 29600049 ETS2 TRANSFAC yes 21218006
chr17 29600045 29600066 IRF1 JASPAR yes 21218007
chr17 29600048 29600062 IRF7 JASPAR yes 21218008
chr17 29600049 29600063 STAT1 JASPAR yes 21218009
chr17 29600049 29600064 STAT2 JASPAR yes 21218010
chr17 29600050 29600062 IRF1 JASPAR yes 21218011
chr17 29600073 29600084 CDX2 JASPAR yes 21218012
chr17 29600074 29600085 HOXA10 JASPAR yes 21218013
chr17 29600075 29600084 CDX1 JASPAR yes 21218014
chr17 29600075 29600085 HOXA13 JASPAR yes 21218015
chr17 29600075 29600085 HOXB13 JASPAR yes 21218016
chr17 29600075 29600085 HOXD13 JASPAR yes 21218017
SNP sites on vista24388[chr17:29599453-29600092]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29599516 rs543495302 T TG no 4824717
chr17 29599669 rs111959216 C T no 4824718
chr17 29599724 rs72815614 C T
TEAD3
4824719
chr17 29599954 rs12943508 C G
MAFF MAFK
4824720
Genes possibly regulated by vista24388[chr17:29599453-29600092]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29599031 29624557 - OMG ENSG00000126861.4 29624557 0.96 0.93 15620 75535
chr17 29630784 29641130 - EVI2B ENSG00000185862.5 29641130 0.94 0.92 15621 58962
chr17 29632231 29645849 - CTD-2370N5.3 ENSG00000265118.1 29645849 0.94 0.97 15622 54243
chr17 29644578 29648902 - EVI2A ENSG00000126860.7 29648902 0.94 0.99 15623 51190
Expression level of Genes
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miRNAs possibly regulated by vista24388[chr17:29599453-29600092]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results