EnhancerDB
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  3. vista24392[chr17:29717293-29717639]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24392[chr17:29717293-29717639]
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Tissue distribution of vista24392
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Transcription factor that possibly regulate vista24392[chr17:29717293-29717639]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29717304 29717318 MTF1 JASPAR yes 21218168
chr17 29717327 29717336 SP1 TRANSFAC yes 21218169
chr17 29717328 29717333 SP1 TRANSFAC yes 21218170
chr17 29717329 29717334 SP1 TRANSFAC yes 21218171
chr17 29717348 29717353 SP1 TRANSFAC yes 21218172
chr17 29717351 29717361 NFKB1 JASPAR yes 21218173
chr17 29717356 29717363 SPIB JASPAR yes 21218174
chr17 29717396 29717406 POU6F2 JASPAR yes 21218175
chr17 29717397 29717407 ALX3 JASPAR yes 21218176
chr17 29717397 29717407 EMX1 JASPAR yes 21218177
chr17 29717397 29717407 EMX2 JASPAR yes 21218178
chr17 29717397 29717407 EN2 JASPAR yes 21218179
chr17 29717397 29717407 EVX1 JASPAR yes 21218180
chr17 29717397 29717407 EVX2 JASPAR yes 21218181
chr17 29717397 29717407 GBX2 JASPAR yes 21218182
chr17 29717397 29717407 HOXA2 JASPAR yes 21218183
chr17 29717397 29717407 HOXB2 JASPAR yes 21218184
chr17 29717397 29717407 HOXB3 JASPAR yes 21218185
chr17 29717397 29717407 MEOX1 JASPAR yes 21218186
chr17 29717397 29717407 MEOX2 JASPAR yes 21218187
chr17 29717397 29717407 MNX1 JASPAR yes 21218188
chr17 29717397 29717407 NOTO JASPAR yes 21218189
chr17 29717397 29717408 HOXA10 JASPAR yes 21218190
chr17 29717398 29717406 LMX1A JASPAR yes 21218191
chr17 29717398 29717406 LMX1B JASPAR yes 21218192
chr17 29717398 29717406 NKX6-1 JASPAR yes 21218193
chr17 29717398 29717406 NKX6-2 JASPAR yes 21218194
chr17 29717398 29717406 PDX1 JASPAR yes 21218195
chr17 29717398 29717406 VAX1 JASPAR yes 21218196
chr17 29717398 29717406 VAX2 JASPAR yes 21218197
chr17 29717398 29717406 VSX1 JASPAR yes 21218198
chr17 29717415 29717428 TFAP2A JASPAR yes 21218199
chr17 29717415 29717428 TFAP2B JASPAR yes 21218200
chr17 29717415 29717428 TFAP2C JASPAR yes 21218201
chr17 29717415 29717430 TFAP2C JASPAR yes 21218202
chr17 29717416 29717427 EBF1 JASPAR yes 21218203
chr17 29717423 29717434 NFKB1 JASPAR yes 21218204
chr17 29717427 29717438 STAT3 JASPAR yes 21218205
chr17 29717439 29717449 MZF1 JASPAR yes 21218206
chr17 29717450 29717454 LFA1 TRANSFAC yes 21218207
chr17 29717464 29717480 POU4F3 JASPAR yes 21218208
chr17 29717466 29717480 POU4F1 JASPAR yes 21218209
chr17 29717466 29717481 HNF1A JASPAR yes 21218210
chr17 29717467 29717480 HNF1B JASPAR yes 21218211
chr17 29717468 29717480 HNF1B JASPAR yes 21218212
chr17 29717476 29717479 MYB TRANSFAC yes 21218213
chr17 29717478 29717487 HIC2 JASPAR yes 21218214
chr17 29717481 29717485 LFA1 TRANSFAC yes 21218215
chr17 29717482 29717492 ID4 JASPAR yes 21218216
chr17 29717482 29717492 TCF4 JASPAR yes 21218217
chr17 29717484 29717489 USF2 TRANSFAC yes 21218218
chr17 29717500 29717519 REST JASPAR yes 21218219
chr17 29717503 29717518 MEF2C JASPAR yes 21218220
chr17 29717515 29717529 GATA2 JASPAR yes 21218221
chr17 29717517 29717525 GATA3 JASPAR yes 21218222
chr17 29717517 29717525 GATA5 JASPAR yes 21218223
chr17 29717520 29717532 YY1 JASPAR yes 21218224
chr17 29717523 29717529 YY1 JASPAR yes 21218225
chr17 29717531 29717537 YY1 JASPAR yes 21218226
chr17 29717554 29717560 PEA3 TRANSFAC yes 21218227
chr17 29717575 29717583 UEF1 TRANSFAC yes 21218228
chr17 29717576 29717584 MEIS2 JASPAR yes 21218229
chr17 29717576 29717584 MEIS3 JASPAR yes 21218230
chr17 29717586 29717594 TBX15 JASPAR yes 21218231
chr17 29717587 29717592 SP1 TRANSFAC yes 21218232
chr17 29717608 29717628 RREB1 JASPAR yes 21218233
chr17 29717617 29717631 TLX1 JASPAR yes 21218234
chr17 29717624 29717629 SP1 TRANSFAC yes 21218235
SNP sites on vista24392[chr17:29717293-29717639]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29717350 rs547813956 G T
SP1
4824976
chr17 29717427 rs113297709 G A
EBF1 NFKB1 STAT3 TFAP2A TFAP2B TFAP2C
4824977
chr17 29717595 rs117565881 G A no 4824978
Genes possibly regulated by vista24392[chr17:29717293-29717639]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29599031 29624557 - OMG ENSG00000126861.4 29624557 0.96 0.93 15620 7264
chr17 29630784 29641130 - EVI2B ENSG00000185862.5 29641130 0.94 0.92 15621 23837
chr17 29632231 29645849 - CTD-2370N5.3 ENSG00000265118.1 29645849 0.94 0.97 15622 28556
chr17 29644578 29648902 - EVI2A ENSG00000126860.7 29648902 0.94 0.99 15623 31609
chr17 29718642 29865236 + RAB11FIP4 ENSG00000131242.11 29718642 0.72 1.0 15624 98997
Expression level of Genes
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miRNAs possibly regulated by vista24392[chr17:29717293-29717639]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results