EnhancerDB
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  3. vista24393[chr17:29719593-29719962]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24393[chr17:29719593-29719962]
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Tissue distribution of vista24393
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Transcription factor that possibly regulate vista24393[chr17:29719593-29719962]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29719593 29719605 PKNOX2 JASPAR yes 21218236
chr17 29719612 29719626 TLX1 JASPAR yes 21218237
chr17 29719661 29719675 TCF7L2 JASPAR yes 21218238
chr17 29719673 29719678 SP1 TRANSFAC yes 21218239
chr17 29719673 29719679 SP1 TRANSFAC yes 21218240
chr17 29719676 29719681 SP1 TRANSFAC yes 21218241
chr17 29719684 29719699 MEF2C JASPAR yes 21218242
chr17 29719687 29719691 YY1 TRANSFAC yes 21218243
chr17 29719691 29719696 TFAP2A TRANSFAC yes 21218244
chr17 29719691 29719697 MZF1 JASPAR yes 21218245
chr17 29719706 29719714 GMEB2 JASPAR yes 21218246
chr17 29719714 29719723 SRY JASPAR yes 21218247
chr17 29719719 29719722 MYB TRANSFAC yes 21218248
chr17 29719793 29719812 CTCF JASPAR yes 21218249
chr17 29719812 29719827 RFX5 JASPAR yes 21218250
chr17 29719817 29719822 TFAP2A TRANSFAC yes 21218251
chr17 29719817 29719823 MZF1 JASPAR yes 21218252
chr17 29719818 29719828 SP1 JASPAR yes 21218253
chr17 29719824 29719829 TFAP2A TRANSFAC yes 21218254
chr17 29719824 29719830 MZF1 JASPAR yes 21218255
chr17 29719832 29719846 PLAG1 JASPAR yes 21218256
chr17 29719833 29719847 EBF1 JASPAR yes 21218257
chr17 29719834 29719845 EBF1 JASPAR yes 21218258
chr17 29719855 29719864 ZEB1 JASPAR yes 21218259
chr17 29719856 29719866 TCF4 JASPAR yes 21218260
chr17 29719858 29719863 USF2 TRANSFAC yes 21218261
chr17 29719872 29719876 ESR1 TRANSFAC yes 21218262
chr17 29719872 29719884 INSM1 JASPAR yes 21218263
chr17 29719876 29719887 NFKB1 JASPAR yes 21218264
chr17 29719876 29719889 NFKB1 JASPAR yes 21218265
chr17 29719876 29719889 NFKB2 JASPAR yes 21218266
chr17 29719877 29719887 NFKB1 JASPAR yes 21218267
chr17 29719877 29719887 RELA JASPAR yes 21218268
chr17 29719877 29719888 NFKB1 JASPAR yes 21218269
chr17 29719883 29719898 TFAP2C JASPAR yes 21218270
chr17 29719884 29719895 EBF1 JASPAR yes 21218271
chr17 29719908 29719927 RFX2 JASPAR yes 21218272
chr17 29719909 29719919 RELA JASPAR yes 21218273
chr17 29719917 29719928 ESRRB JASPAR yes 21218274
chr17 29719920 29719936 SRF JASPAR yes 21218275
chr17 29719922 29719928 YY1 JASPAR yes 21218276
chr17 29719928 29719943 TFAP2A JASPAR yes 21218277
chr17 29719928 29719943 TFAP2C JASPAR yes 21218278
chr17 29719930 29719945 TFAP2A JASPAR yes 21218279
chr17 29719930 29719945 TFAP2C JASPAR yes 21218280
chr17 29719931 29719942 TFAP2A JASPAR yes 21218281
chr17 29719931 29719942 TFAP2B JASPAR yes 21218282
chr17 29719931 29719942 TFAP2C JASPAR yes 21218283
chr17 29719942 29719956 GLIS2 JASPAR yes 21218284
chr17 29719942 29719956 GLIS3 JASPAR yes 21218285
chr17 29719950 29719955 SP1 TRANSFAC yes 21218286
chr17 29719953 29719962 TFAP2A JASPAR yes 21218287
SNP sites on vista24393[chr17:29719593-29719962]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29719676 rs532183575 C T
SP1
4824992
chr17 29719717 rs78690710 T G
SRY
4824993
chr17 29719765 rs8074165 G A no 4824994
chr17 29719927 rs142857140 T C
ESRRB RFX2 SRF YY1
4824995
chr17 29719956 rs191263700 C G
GLIS2 GLIS3 TFAP2A
4824996
Genes possibly regulated by vista24393[chr17:29719593-29719962]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29599031 29624557 - OMG ENSG00000126861.4 29624557 0.96 0.93 15620 4964
chr17 29630784 29641130 - EVI2B ENSG00000185862.5 29641130 0.94 0.92 15621 21537
chr17 29632231 29645849 - CTD-2370N5.3 ENSG00000265118.1 29645849 0.94 0.97 15622 26256
chr17 29644578 29648902 - EVI2A ENSG00000126860.7 29648902 0.94 0.99 15623 29309
chr17 29718642 29865236 + RAB11FIP4 ENSG00000131242.11 29718642 0.72 1.0 15624 99049
Expression level of Genes
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miRNAs possibly regulated by vista24393[chr17:29719593-29719962]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results