EnhancerDB
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  3. vista24397[chr17:29778166-29778494]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24397[chr17:29778166-29778494]
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Tissue distribution of vista24397
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Transcription factor that possibly regulate vista24397[chr17:29778166-29778494]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29778180 29778199 CTCF JASPAR yes 21218381
chr17 29778180 29778199 CTCF JASPAR yes 53837905
chr17 29778183 29778186 MYB TRANSFAC yes 21218382
chr17 29778183 29778186 MYB TRANSFAC yes 53837906
chr17 29778195 29778204 HIC2 JASPAR yes 21218383
chr17 29778195 29778204 HIC2 JASPAR yes 53837907
chr17 29778196 29778212 ZNF143 JASPAR yes 21218384
chr17 29778196 29778212 ZNF143 JASPAR yes 53837908
chr17 29778197 29778207 SP1 JASPAR yes 21218385
chr17 29778197 29778207 SP1 JASPAR yes 53837909
chr17 29778198 29778202 LFA1 TRANSFAC yes 21218386
chr17 29778198 29778202 LFA1 TRANSFAC yes 53837910
chr17 29778203 29778214 FOSL2 JASPAR yes 21218387
chr17 29778203 29778214 FOSL2 JASPAR yes 53837911
chr17 29778205 29778218 SMAD2 JASPAR yes 21218388
chr17 29778205 29778218 SMAD2 JASPAR yes 53837912
chr17 29778206 29778219 EOMES JASPAR yes 21218389
chr17 29778206 29778219 EOMES JASPAR yes 53837913
chr17 29778208 29778218 TBR1 JASPAR yes 21218390
chr17 29778208 29778218 TBR1 JASPAR yes 53837914
chr17 29778208 29778219 TBX20 JASPAR yes 21218391
chr17 29778208 29778219 TBX2 JASPAR yes 21218392
chr17 29778208 29778219 TBX20 JASPAR yes 53837915
chr17 29778208 29778219 TBX2 JASPAR yes 53837916
chr17 29778209 29778219 TBX21 JASPAR yes 21218393
chr17 29778209 29778219 TBX21 JASPAR yes 53837917
chr17 29778210 29778218 MGA JASPAR yes 21218394
chr17 29778210 29778218 TBX15 JASPAR yes 21218395
chr17 29778210 29778218 TBX1 JASPAR yes 21218396
chr17 29778210 29778218 TBX4 JASPAR yes 21218397
chr17 29778210 29778218 TBX5 JASPAR yes 21218398
chr17 29778210 29778218 MGA JASPAR yes 53837918
chr17 29778210 29778218 TBX15 JASPAR yes 53837919
chr17 29778210 29778218 TBX1 JASPAR yes 53837920
chr17 29778210 29778218 TBX4 JASPAR yes 53837921
chr17 29778210 29778218 TBX5 JASPAR yes 53837922
chr17 29778217 29778221 TEAD2 TRANSFAC yes 21218399
chr17 29778217 29778221 TEAD2 TRANSFAC yes 53837923
chr17 29778218 29778226 RHOXF1 JASPAR yes 21218400
chr17 29778218 29778226 RHOXF1 JASPAR yes 53837924
chr17 29778244 29778253 SNAI2 JASPAR yes 21218401
chr17 29778244 29778253 SNAI2 JASPAR yes 53837925
chr17 29778244 29778254 ID4 JASPAR yes 21218402
chr17 29778244 29778254 ID4 JASPAR yes 53837926
chr17 29778247 29778260 NFKB1 JASPAR yes 21218403
chr17 29778247 29778260 NFKB1 JASPAR yes 53837927
chr17 29778249 29778255 ZNF354C JASPAR yes 21218404
chr17 29778249 29778255 ZNF354C JASPAR yes 53837928
chr17 29778252 29778263 USF1 JASPAR yes 21218405
chr17 29778252 29778263 USF2 JASPAR yes 21218406
chr17 29778252 29778263 USF1 JASPAR yes 53837929
chr17 29778252 29778263 USF2 JASPAR yes 53837930
chr17 29778253 29778263 SREBF2 JASPAR yes 21218407
chr17 29778253 29778263 SREBF2 JASPAR yes 53837931
chr17 29778255 29778260 USF2 TRANSFAC yes 21218408
chr17 29778255 29778260 USF2 TRANSFAC yes 53837932
chr17 29778258 29778271 NR2F1 JASPAR yes 21218409
chr17 29778258 29778271 NR2F1 JASPAR yes 53837933
chr17 29778259 29778267 CREB1 JASPAR yes 21218410
chr17 29778259 29778267 CREB1 JASPAR yes 53837934
chr17 29778260 29778278 RARA JASPAR yes 21218411
chr17 29778260 29778278 RARA JASPAR yes 53837935
chr17 29778262 29778266 ESR1 TRANSFAC yes 21218412
chr17 29778262 29778266 ESR1 TRANSFAC yes 53837936
chr17 29778288 29778300 YY1 JASPAR yes 21218413
chr17 29778288 29778300 YY1 JASPAR yes 53837937
chr17 29778292 29778303 CEBPB JASPAR yes 21218414
chr17 29778292 29778303 CEBPB JASPAR yes 53837938
chr17 29778293 29778306 NFKB1 JASPAR yes 21218415
chr17 29778293 29778306 NFKB2 JASPAR yes 21218416
chr17 29778293 29778306 NFKB1 JASPAR yes 53837939
chr17 29778293 29778306 NFKB2 JASPAR yes 53837940
chr17 29778327 29778348 REST JASPAR yes 21218417
chr17 29778327 29778348 REST JASPAR yes 53837941
chr17 29778328 29778347 REST JASPAR yes 21218418
chr17 29778328 29778347 REST JASPAR yes 53837942
chr17 29778402 29778412 SP1 JASPAR yes 21218419
chr17 29778402 29778412 SP1 JASPAR yes 53837943
chr17 29778402 29778423 ZNF263 JASPAR yes 21218420
chr17 29778402 29778423 ZNF263 JASPAR yes 53837944
chr17 29778404 29778409 SP1 TRANSFAC yes 21218421
chr17 29778404 29778409 SP1 TRANSFAC yes 53837945
chr17 29778404 29778416 HINFP JASPAR yes 21218422
chr17 29778404 29778416 HINFP JASPAR yes 53837946
chr17 29778409 29778426 ESR1 JASPAR yes 21218423
chr17 29778409 29778426 ESR1 JASPAR yes 53837947
chr17 29778424 29778436 YY1 JASPAR yes 21218424
chr17 29778424 29778436 YY1 JASPAR yes 53837948
chr17 29778424 29778442 E2F3 JASPAR yes 21218425
chr17 29778424 29778442 E2F3 JASPAR yes 53837949
chr17 29778427 29778433 YY1 JASPAR yes 21218426
chr17 29778427 29778433 YY1 JASPAR yes 53837950
chr17 29778427 29778439 E2F1 JASPAR yes 21218427
chr17 29778427 29778439 E2F1 JASPAR yes 53837951
chr17 29778449 29778468 PAX5 JASPAR yes 21218428
chr17 29778449 29778468 PAX5 JASPAR yes 53837952
chr17 29778451 29778455 LFA1 TRANSFAC yes 21218429
chr17 29778451 29778455 LFA1 TRANSFAC yes 53837953
chr17 29778473 29778488 FOXP1 JASPAR yes 21218430
chr17 29778473 29778488 FOXP1 JASPAR yes 53837954
chr17 29778474 29778489 FOXP1 JASPAR yes 21218431
chr17 29778474 29778489 FOXP1 JASPAR yes 53837955
chr17 29778475 29778490 FOXP1 JASPAR yes 21218432
chr17 29778475 29778490 FOXP1 JASPAR yes 53837956
chr17 29778475 29778496 IRF1 JASPAR yes 21218433
chr17 29778475 29778496 IRF1 JASPAR yes 53837957
chr17 29778476 29778491 FOXP1 JASPAR yes 21218434
chr17 29778476 29778491 FOXP1 JASPAR yes 53837958
chr17 29778476 29778497 IRF1 JASPAR yes 21218435
chr17 29778476 29778497 IRF1 JASPAR yes 53837959
chr17 29778477 29778492 FOXP1 JASPAR yes 21218436
chr17 29778477 29778492 FOXP1 JASPAR yes 53837960
chr17 29778477 29778498 IRF1 JASPAR yes 21218437
chr17 29778477 29778498 IRF1 JASPAR yes 53837961
chr17 29778478 29778493 FOXP1 JASPAR yes 21218438
chr17 29778478 29778493 FOXP1 JASPAR yes 53837962
chr17 29778478 29778499 IRF1 JASPAR yes 21218439
chr17 29778478 29778499 IRF1 JASPAR yes 53837963
chr17 29778479 29778494 FOXP1 JASPAR yes 21218440
chr17 29778479 29778494 FOXP1 JASPAR yes 53837964
chr17 29778479 29778500 IRF1 JASPAR yes 21218441
chr17 29778479 29778500 IRF1 JASPAR yes 53837965
chr17 29778480 29778495 FOXP1 JASPAR yes 21218442
chr17 29778480 29778495 FOXP1 JASPAR yes 53837966
chr17 29778480 29778501 IRF1 JASPAR yes 21218443
chr17 29778480 29778501 IRF1 JASPAR yes 53837967
chr17 29778481 29778496 FOXP1 JASPAR yes 21218444
chr17 29778481 29778496 FOXP1 JASPAR yes 53837968
chr17 29778481 29778502 IRF1 JASPAR yes 21218445
chr17 29778481 29778502 IRF1 JASPAR yes 53837969
chr17 29778482 29778497 FOXP1 JASPAR yes 21218446
chr17 29778482 29778497 FOXP1 JASPAR yes 53837970
chr17 29778483 29778498 FOXP1 JASPAR yes 21218447
chr17 29778483 29778498 FOXP1 JASPAR yes 53837971
chr17 29778483 29778504 IRF1 JASPAR yes 21218448
chr17 29778483 29778504 IRF1 JASPAR yes 53837972
chr17 29778484 29778499 FOXP1 JASPAR yes 21218449
chr17 29778484 29778499 FOXP1 JASPAR yes 53837973
chr17 29778484 29778505 IRF1 JASPAR yes 21218450
chr17 29778484 29778505 IRF1 JASPAR yes 53837974
chr17 29778485 29778500 FOXP1 JASPAR yes 21218451
chr17 29778485 29778500 FOXP1 JASPAR yes 53837975
SNP sites on vista24397[chr17:29778166-29778494]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29778301 rs562215038 A AC
CEBPB NFKB1 NFKB2
4825538
chr17 29778322 rs72481500 C G no 4825539
chr17 29778418 rs190459626 A C
ESR1 ZNF263
4825540
chr17 29778470 rs6505246 C T no 4825541
Genes possibly regulated by vista24397[chr17:29778166-29778494]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29718642 29865236 + RAB11FIP4 ENSG00000131242.11 29718642 0.72 1.0 15624 40476
Expression level of Genes
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miRNAs possibly regulated by vista24397[chr17:29778166-29778494]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results