EnhancerDB
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  3. vista24399[chr17:29787763-29788137]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24399[chr17:29787763-29788137]
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Tissue distribution of vista24399
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Transcription factor that possibly regulate vista24399[chr17:29787763-29788137]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 29787782 29787786 NFE TRANSFAC yes 21218495
chr17 29787782 29787786 NFE TRANSFAC yes 53839222
chr17 29787804 29787814 SREBF1 JASPAR yes 21218496
chr17 29787804 29787814 SREBF2 JASPAR yes 21218497
chr17 29787804 29787814 SREBF1 JASPAR yes 53839223
chr17 29787804 29787814 SREBF2 JASPAR yes 53839224
chr17 29787805 29787813 MGA JASPAR yes 21218498
chr17 29787805 29787813 MGA JASPAR yes 53839225
chr17 29787821 29787834 ATF4 JASPAR yes 21218499
chr17 29787821 29787834 ATF4 JASPAR yes 53839226
chr17 29787847 29787865 RARA JASPAR yes 21218500
chr17 29787847 29787865 RARA JASPAR yes 53839227
chr17 29787853 29787864 E2F6 JASPAR yes 21218501
chr17 29787853 29787864 E2F6 JASPAR yes 53839228
chr17 29787856 29787864 TBX15 JASPAR yes 21218502
chr17 29787856 29787864 TBX15 JASPAR yes 53839229
chr17 29787886 29787895 SNAI2 JASPAR yes 21218503
chr17 29787886 29787895 SNAI2 JASPAR yes 53839230
chr17 29787886 29787896 ID4 JASPAR yes 21218504
chr17 29787886 29787896 TCF3 JASPAR yes 21218505
chr17 29787886 29787896 TCF4 JASPAR yes 21218506
chr17 29787886 29787896 ID4 JASPAR yes 53839231
chr17 29787886 29787896 TCF3 JASPAR yes 53839232
chr17 29787886 29787896 TCF4 JASPAR yes 53839233
chr17 29787888 29787897 ZEB1 JASPAR yes 21218507
chr17 29787888 29787897 ZEB1 JASPAR yes 53839234
chr17 29787900 29787910 SP1 JASPAR yes 21218508
chr17 29787900 29787910 SP1 JASPAR yes 53839235
chr17 29787903 29787908 SP1 TRANSFAC yes 21218509
chr17 29787903 29787908 SP1 TRANSFAC yes 53839236
chr17 29787911 29787921 MAX JASPAR yes 21218510
chr17 29787911 29787921 MAX JASPAR yes 53839237
chr17 29787916 29787927 FOXH1 JASPAR yes 21218511
chr17 29787916 29787927 FOXH1 JASPAR yes 53839238
chr17 29787916 29787931 MEF2A JASPAR yes 21218512
chr17 29787916 29787931 MEF2A JASPAR yes 53839239
chr17 29787917 29787932 MEF2C JASPAR yes 21218513
chr17 29787917 29787932 MEF2C JASPAR yes 53839240
chr17 29787918 29787930 MEF2D JASPAR yes 21218514
chr17 29787918 29787930 MEF2D JASPAR yes 53839241
chr17 29787920 29787924 YY1 TRANSFAC yes 21218515
chr17 29787920 29787924 YY1 TRANSFAC yes 53839242
chr17 29787925 29787934 VENTX JASPAR yes 21218516
chr17 29787925 29787934 VENTX JASPAR yes 53839243
chr17 29787930 29787947 BCL6B JASPAR yes 21218517
chr17 29787930 29787947 BCL6B JASPAR yes 53839244
chr17 29787980 29788000 TP63 JASPAR yes 21218518
chr17 29787980 29788000 TP63 JASPAR yes 53839245
chr17 29787983 29787998 TP53 JASPAR yes 21218519
chr17 29787983 29787998 TP53 JASPAR yes 53839246
chr17 29787985 29787996 NFE2L2 JASPAR yes 21218520
chr17 29787985 29787996 NFE2L2 JASPAR yes 53839247
chr17 29787988 29787994 ESR1 TRANSFAC yes 21218521
chr17 29787988 29787994 ESR1 TRANSFAC yes 53839248
chr17 29787990 29787994 ESR1 TRANSFAC yes 21218522
chr17 29787990 29787994 ESR1 TRANSFAC yes 53839249
chr17 29787990 29788001 USF1 JASPAR yes 21218523
chr17 29787990 29788001 USF1 JASPAR yes 53839250
chr17 29787991 29788001 TFEB JASPAR yes 21218524
chr17 29787991 29788001 TFEC JASPAR yes 21218525
chr17 29787991 29788001 TFEB JASPAR yes 53839251
chr17 29787991 29788001 TFEC JASPAR yes 53839252
chr17 29788002 29788014 INSM1 JASPAR yes 21218526
chr17 29788002 29788014 INSM1 JASPAR yes 53839253
chr17 29788004 29788024 RREB1 JASPAR yes 21218527
chr17 29788004 29788024 RREB1 JASPAR yes 53839254
chr17 29788009 29788023 GLIS3 JASPAR yes 21218528
chr17 29788009 29788023 GLIS3 JASPAR yes 53839255
chr17 29788011 29788026 RUNX2 JASPAR yes 21218529
chr17 29788011 29788026 RUNX2 JASPAR yes 53839256
chr17 29788023 29788040 RXRA JASPAR yes 21218530
chr17 29788023 29788040 RXRA JASPAR yes 53839257
chr17 29788027 29788031 NFE TRANSFAC yes 21218531
chr17 29788027 29788031 NFE TRANSFAC yes 53839258
chr17 29788032 29788052 RREB1 JASPAR yes 21218532
chr17 29788032 29788052 RREB1 JASPAR yes 53839259
chr17 29788046 29788052 ZNF354C JASPAR yes 21218533
chr17 29788046 29788052 ZNF354C JASPAR yes 53839260
chr17 29788060 29788076 GLIS1 JASPAR yes 21218534
chr17 29788060 29788076 GLIS1 JASPAR yes 53839261
chr17 29788061 29788075 GLIS2 JASPAR yes 21218535
chr17 29788061 29788075 GLIS3 JASPAR yes 21218536
chr17 29788061 29788075 GLIS2 JASPAR yes 53839262
chr17 29788061 29788075 GLIS3 JASPAR yes 53839263
chr17 29788084 29788096 E2F8 JASPAR yes 21218537
chr17 29788084 29788096 E2F8 JASPAR yes 53839264
chr17 29788089 29788109 RREB1 JASPAR yes 21218538
chr17 29788089 29788109 RREB1 JASPAR yes 53839265
chr17 29788091 29788102 FOXH1 JASPAR yes 21218539
chr17 29788091 29788102 FOXH1 JASPAR yes 53839266
chr17 29788095 29788101 ZNF354C JASPAR yes 21218540
chr17 29788095 29788101 ZNF354C JASPAR yes 53839267
chr17 29788124 29788130 NFIC JASPAR yes 21218541
chr17 29788124 29788130 NFIC JASPAR yes 53839268
chr17 29788133 29788147 PLAG1 JASPAR yes 21218542
chr17 29788133 29788147 PLAG1 JASPAR yes 53839269
SNP sites on vista24399[chr17:29787763-29788137]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 29787771 rs117740303 C T no 4825686
chr17 29787987 rs530452625 G T
NFE2L2 TP53 TP63
4825687
chr17 29788069 rs146976409 C T
GLIS1 GLIS2 GLIS3
4825688
chr17 29788102 rs138129732 A G
FOXH1 RREB1
4825689
chr17 29788121 rs2525581 T C no 4825690
chr17 29788124 rs541104699 C T
NFIC
4825691
chr17 29788125 rs2525582 T C
NFIC
4825692
Genes possibly regulated by vista24399[chr17:29787763-29788137]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 29718642 29865236 + RAB11FIP4 ENSG00000131242.11 29718642 0.72 1.0 15624 30879
Expression level of Genes
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miRNAs possibly regulated by vista24399[chr17:29787763-29788137]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results